Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000005d0
Genome
Vibrio cholerae - NC_002505.1
TF
RpoN [UniProtKB:Q9KP49, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CGGCACCCTTTTTGC + [1631840, 1631854] 22723378 Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details RNA-Seq (ECO:0005664) - 8

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... VC1519 VC1518 VC1517 VC1520
Gene Locus tag Description
VC1519 VC1519 formate dehydrogenase accessory protein
VC1518 VC1518 hypothetical protein
VC1517 VC1517 hypothetical protein
VC1520 VC1520 ABC transporter ATP-binding protein