Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00000680
Genome
Vibrio cholerae - NC_002505.1
TF
RpoN [UniProtKB:Q9KP49, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGGCATCGATCTTGA + [517096, 517110] 22723378 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details RNA-Seq (ECO:0005664) - 10

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... VC0486 VC0485 VC0487
Gene Locus tag Description
VC0486 VC0486 DeoR family transcriptional regulator
VC0485 VC0485 pyruvate kinase
VC0487 VC0487 glucosamine--fructose-6-phosphate aminotransferase