Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000007d0
Genome
Vibrio cholerae - NC_002505.1
TF
RpoN [UniProtKB:Q9KP49, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGGACTGAAAATTGC - [2226620, 2226634] 22723378 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details RNA-Seq (ECO:0005664) - 10

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... flhA flhF VC2067 fliA VC2065 VC2070 VC2071 VC2072 VC2073
Gene Locus tag Description
flhA VC2069 flagellar biosynthesis protein FlhA
flhF VC2068 flagellar biosynthesis regulator FlhF
VC2067 VC2067 MinD-like protein
fliA VC2066 flagellar biosynthesis sigma factor
VC2065 VC2065 chemotaxis protein CheY
VC2070 VC2070 phosphohistidine phosphatase
VC2071 VC2071 hypothetical protein
VC2072 VC2072 peptidase insulinase family protein
VC2073 VC2073 hypothetical protein