Transcription Factor Binding Site Information

Escherichia coli - NC_000913.2
RutR [UniProtKB:P0ACU2, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TAGACCGACTGGTCTA + [1724017, 1724032] 18515344 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - 102

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ydhL ydhF nemR nemA
Gene Locus tag Description
ydhL b1648 conserved protein
ydhF b1647 predicted oxidoreductase
nemR b1649 transcriptional repressor for the nem operon, NEM-inactivated
nemA b1650 N-ethylmaleimide reductase, FMN-linked