Transcription Factor Binding Site Information

Escherichia coli - NC_000913.2
RutR [UniProtKB:P0ACU2, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGACCATACGGTAAA + [4419510, 4419525] 18515344 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - 102

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ulaB ulaA ulaC ulaD ulaE ulaF
Gene Locus tag Description
ulaB b4194 L-ascorbate-specific enzyme IIB component of PTS
ulaA b4193 L-ascorbate-specific enzyme IIC component of PTS
ulaC b4195 L-ascorbate-specific enzyme IIA component of PTS
ulaD b4196 3-keto-L-gulonate 6-phosphate decarboxylase
ulaE b4197 L-xylulose 5-phosphate 3-epimerase
ulaF b4198 L-ribulose 5-phosphate 4-epimerase