Transcription Factor Binding Site Information

Acidithiobacillus ferrooxidans - NC_011761.1
Fur [UniProtKB:B7J425, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GTAATAAGACTCATTCGT - [2242097, 2242114] 17355989 Experimental technique details Beta-gal reporter assay - Experimental technique details EMSA (ECO:0001807) - Experimental technique details FURTA (ECO:0005633) - Experimental technique details In-vitro transcription (ECO:0001204) - Experimental technique details Luciferase reporter assay (ECO:0005648) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 247

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... AFE_2523 AFE_2522 AFE_2520 AFE_2521 feoB AFE_2525
Gene Locus tag Description
AFE_2523 AFE_2523 feoA family protein
AFE_2522 AFE_2522 carbohydrate-selective porin, OprB family
AFE_2520 AFE_2520 NLP/P60 family protein
AFE_2521 AFE_2521 hypothetical protein
feoB AFE_2524 ferrous iron transport protein B
AFE_2525 AFE_2525 hypothetical protein