Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00004c10
Genome
Acidithiobacillus ferrooxidans - NC_011761.1
TF
Fur [UniProtKB:B7J425, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GATATTATAGTTATTCTT + [1282210, 1282227] 17355989 Experimental technique details Beta-gal reporter assay - Experimental technique details EMSA (ECO:0001807) - Experimental technique details FURTA (ECO:0005633) - Experimental technique details In-vitro transcription (ECO:0001204) - Experimental technique details Luciferase reporter assay (ECO:0005648) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details Site directed mutagenesis (ECO:0005667) - 247

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... AFE_1481 AFE_1482 AFE_1483
Gene Locus tag Description
AFE_1481 AFE_1481 hypothetical protein
AFE_1482 AFE_1482 hypothetical protein
AFE_1483 AFE_1483 TonB-dependent receptor