Transcription Factor Binding Site Information

Acidithiobacillus ferrooxidans - NC_011761.1
Fur [UniProtKB:B7J425, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATAAGGGTGAGCATACGG + [601125, 601142] 17355989 Experimental technique details Beta-gal reporter assay - Experimental technique details EMSA (ECO:0001807) - Experimental technique details FURTA (ECO:0005633) - Experimental technique details In-vitro transcription (ECO:0001204) - Experimental technique details PSSM site search (ECO:0005659) - 248

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... iscR cysE-2 AFE_0670
Gene Locus tag Description
iscR AFE_0672 iron-sulfur cluster assembly transcription factor IscR
cysE-2 AFE_0671 serine O-acetyltransferase
AFE_0670 AFE_0670 TrmH family RNA methyltransferase