Transcription Factor Binding Site Information

Pseudomonas syringae group genomosp. 3 - NC_004578.1
Fur [UniProtKB:Q87WN7, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AAGAGAATCATTCGCGA - [489092, 489108] 21784947 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details Motif-discovery (ECO:0005558) - 374

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PSPTO_0448 PSPTO_0447 PSPTO_0446 PSPTO_0445 PSPTO_0444 betI betB PSPTO_0442 betA
Gene Locus tag Description
PSPTO_0448 PSPTO_0448 glutathione S-transferase
PSPTO_0447 PSPTO_0447 hypothetical protein
PSPTO_0446 PSPTO_0446 membrane protein
PSPTO_0445 PSPTO_0445 regulatory protein
PSPTO_0444 PSPTO_0444 RNA polymerase sigma-70 family protein
betI PSPTO_0440 regulatory protein BetI
betB PSPTO_0441 betaine aldehyde dehydrogenase BADH
PSPTO_0442 PSPTO_0442 hypothetical protein
betA PSPTO_0443 choline dehydrogenase