Transcription Factor Binding Site Information

Pseudomonas aeruginosa - NC_002516.2
Fur [UniProtKB:Q03456, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ACGATTGCTAATCAATCTT + [1015908, 1015926] 8633080 Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Genomic SELEX (ECO:0005634) - Experimental technique details RNAse protection (ECO:0000288) - 411

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PA0929 gacS ldhA PA0926 PA0925 PA0924 dinB PA0922.1 PA0930
Gene Locus tag Description
PA0929 PA0929 two-component response regulator
gacS PA0928 sensor/response regulator hybrid
ldhA PA0927 D-lactate dehydrogenase
PA0926 PA0926 hypothetical protein
PA0925 PA0925 hypothetical protein
PA0924 PA0924 hypothetical protein
dinB PA0923 DNA polymerase IV
PA0922.1 PA0922.1 tRNA
PA0930 PA0930 two-component sensor