Transcription Factor Binding Site Information

Pseudomonas aeruginosa - NC_002516.2
Fur [UniProtKB:Q03456, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GAAAACAATAATCAATCTC - [5000327, 5000345] 8633080 Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Genomic SELEX (ECO:0005634) - Experimental technique details RNAse protection (ECO:0000288) - 411

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... 5000000 PA4471 fumC1 PA4469 sodM PA4467 PA4466 PA4465 ptsN PA4463 rpoN pmbA PA4473 PA4474 PA4475 PA4476 cafA PA4478 mreD mreC mreB
Gene Locus tag Description
PA4471 PA4471 hypothetical protein
fumC1 PA4470 fumarate hydratase
PA4469 PA4469 hypothetical protein
sodM PA4468 superoxide dismutase
PA4467 PA4467 hypothetical protein
PA4466 PA4466 phosphoryl carrier protein
PA4465 PA4465 hypothetical protein
ptsN PA4464 nitrogen regulatory IIA protein
PA4463 PA4463 hypothetical protein
rpoN PA4462 RNA polymerase factor sigma-54
pmbA PA4472 PmbA protein
PA4473 PA4473 hypothetical protein
PA4474 PA4474 hypothetical protein
PA4475 PA4475 hypothetical protein
PA4476 PA4476 hypothetical protein
cafA PA4477 cytoplasmic axial filament protein
PA4478 PA4478 Maf-like protein
mreD PA4479 rod shape-determining protein MreD
mreC PA4480 rod shape-determining protein MreC
mreB PA4481 rod shape-determining protein MreB