Transcription Factor Binding Site Information

Pseudomonas aeruginosa - NC_002516.2
Fur [UniProtKB:Q03456, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GGAAATGAGAATCATTATT + [5283967, 5283985] 8633080 Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Genomic SELEX (ECO:0005634) - Experimental technique details RNAse protection (ECO:0000288) - 411

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... prrF1 cbpA PA4703 prrF2 PA4705 PA4706 PA4707 phuT PA4709
Gene Locus tag Description
prrF1 PA4704.1 ncRNA
cbpA PA4704 cAMP-binding protein A
PA4703 PA4703 hypothetical protein
prrF2 PA4704.2 ncRNA
PA4705 PA4705 hypothetical protein
PA4706 PA4706 hemin importer ATP-binding subunit
PA4707 PA4707 ABC transporter permease
phuT PA4708 Heme-transporter, PhuT
PA4709 PA4709 hemin degrading factor