Transcription Factor Binding Site Information

Pseudomonas aeruginosa - NC_002516.2
Fur [UniProtKB:Q03456, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GTTATTGAGAATCATTGGC - [1433131, 1433149] 8633080 Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Genomic SELEX (ECO:0005634) - Experimental technique details RNAse protection (ECO:0000288) - 411

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... cyoE cyoD cyoC cyoB cyoA PA1322 PA1323 PA1324 PA1324.1 PA1325 ilvA2 PA1327 PA1328 PA1329 PA1330 PA1331
Gene Locus tag Description
cyoE PA1321 protoheme IX farnesyltransferase
cyoD PA1320 cytochrome o ubiquinol oxidase subunit IV
cyoC PA1319 cytochrome o ubiquinol oxidase subunit III
cyoB PA1318 cytochrome o ubiquinol oxidase subunit I
cyoA PA1317 cytochrome o ubiquinol oxidase subunit II
PA1322 PA1322 TonB-dependent receptor
PA1323 PA1323 hypothetical protein
PA1324 PA1324 hypothetical protein
PA1324.1 PA1324.1 ncRNA
PA1325 PA1325 hypothetical protein
ilvA2 PA1326 threonine dehydratase
PA1327 PA1327 protease
PA1328 PA1328 transcriptional regulator
PA1329 PA1329 hypothetical protein
PA1330 PA1330 short-chain dehydrogenase
PA1331 PA1331 hypothetical protein