Transcription Factor Binding Site Information

Pseudomonas aeruginosa - NC_002516.2
Fur [UniProtKB:Q03456, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TAAATTTATAATAATTCTC + [2640955, 2640973] 8633080 Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Genomic SELEX (ECO:0005634) - Experimental technique details RNAse protection (ECO:0000288) - 411

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... fpvI pvdA pvdQ fpvR pvdR pvdT opmQ pvdP
Gene Locus tag Description
fpvI PA2387 RNA polymerase sigma factor
pvdA PA2386 L-ornithine N5-oxygenase
pvdQ PA2385 3-oxo-C12-homoserine lactone acylase PvdQ
fpvR PA2388 protein FpvR
pvdR PA2389 protein PvdR
pvdT PA2390 protein PvdT
opmQ PA2391 hypothetical protein
pvdP PA2392 protein PvdP