Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00008860
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
LasR [UniProtKB:P25084, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CCTGCTTTTCTGCTAG - [4170720, 4170735] 19682264 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - 421

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... lasB PA3732 PA3731 PA3730 PA3729 PA3728 PA3727 PA3726 recJ
Gene Locus tag Description
lasB PA3724 elastase LasB
PA3732 PA3732 hypothetical protein
PA3731 PA3731 hypothetical protein
PA3730 PA3730 hypothetical protein
PA3729 PA3729 hypothetical protein
PA3728 PA3728 hypothetical protein
PA3727 PA3727 hypothetical protein
PA3726 PA3726 hypothetical protein
recJ PA3725 single-stranded-DNA-specific exonuclease RecJ