Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00008900
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
LasR [UniProtKB:P25084, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGAGCAGTTCAGATAG + [4373863, 4373878] 19682264 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - 421

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PA3908 PA3907 PA3906 PA3905 PA3904 prfC
Gene Locus tag Description
PA3908 PA3908 hypothetical protein
PA3907 PA3907 hypothetical protein
PA3906 PA3906 hypothetical protein
PA3905 PA3905 hypothetical protein
PA3904 PA3904 hypothetical protein
prfC PA3903 peptide chain release factor 3