Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00009260
Genome
Vibrio cholerae - NC_009457.1
TF
ToxR [UniProtKB:A0A0H3AK48, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGTTTTTTTC - [1547024, 1547033] 10632889 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - 442

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ompT VC0395_A1444 VC0395_A1443 VC0395_A1442 VC0395_A1441 ppiB cysS ruvC ruvA ruvB dinG VC0395_A1447 priC VC0395_A1449 VC0395_A1450
Gene Locus tag Description
ompT VC0395_A1445 ompT protein
VC0395_A1444 VC0395_A1444 hypothetical protein
VC0395_A1443 VC0395_A1443 hypothetical protein
VC0395_A1442 VC0395_A1442 hypothetical protein
VC0395_A1441 VC0395_A1441 UDP-2,3-diacylglucosamine hydrolase
ppiB VC0395_A1440 peptidyl-prolyl cis-trans isomerase B
cysS VC0395_A1439 cysteinyl-tRNA synthetase
ruvC VC0395_A1438 Holliday junction resolvase
ruvA VC0395_A1437 Holliday junction DNA helicase RuvA
ruvB VC0395_A1436 Holliday junction DNA helicase RuvB
dinG VC0395_A1446 ATP-dependent DNA helicase DinG
VC0395_A1447 VC0395_A1447 hypothetical protein
priC VC0395_A1448 primosomal replication protein N``
VC0395_A1449 VC0395_A1449 hypothetical protein
VC0395_A1450 VC0395_A1450 methyl-accepting chemotaxis protein