Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00009520
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
AlgR [UniProtKB:P26275, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CCGTTGTTC + [1956296, 1956304] 15317771 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Multiple sequence alignment (MSA) (ECO:0005556) - 458

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... lon clpX clpP tig hupB PA1804.1 ppiD fabI PA1807 PA1808 PA1809 PA1810 PA1811
Gene Locus tag Description
lon PA1803 Lon protease
clpX PA1802 ATP-dependent protease ATP-binding subunit ClpX
clpP PA1801 ATP-dependent Clp protease proteolytic subunit
tig PA1800 trigger factor
hupB PA1804 DNA-binding protein HU
PA1804.1 PA1804.1 tRNA
ppiD PA1805 peptidyl-prolyl cis-trans isomerase D
fabI PA1806 NADH-dependent enoyl-ACP reductase
PA1807 PA1807 ABC transporter ATP-binding protein
PA1808 PA1808 ABC transporter permease
PA1809 PA1809 ABC transporter permease
PA1810 PA1810 ABC transporter
PA1811 PA1811 solute-binding protein