Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00009590
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
AlgR [UniProtKB:P26275, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CCGGGCGTC + [1696335, 1696343] 15317771 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Multiple sequence alignment (MSA) (ECO:0005556) - Experimental technique details Primer Extension assay (ECO:0005657) - 461

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ccoN2 ccoO2 ccoQ2 ccoP2 PA1558 PA1559 PA1560 aer
Gene Locus tag Description
ccoN2 PA1557 cbb3-type cytochrome C oxidase subunit I
ccoO2 PA1556 cbb3-type cytochrome C oxidase subunit II
ccoQ2 PA1555.1 cytochrome C oxidase cbb3-type, CcoQ subunit
ccoP2 PA1555 cytochrome C oxidase cbb3-type, CcoP subunit
PA1558 PA1558 hypothetical protein
PA1559 PA1559 hypothetical protein
PA1560 PA1560 hypothetical protein
aer PA1561 aerotaxis receptor Aer