Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00012e70
Genome
Pseudomonas putida - NC_002947.3
TF
ColR [UniProtKB:Q88PE9, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTCACACTTTTTTCAC + [4296098, 4296113] 19445690 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - 651

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... gloA PP_3767
Gene Locus tag Description
gloA PP_3766 lactoylglutathione lyase
PP_3767 PP_3767 hypothetical protein