Transcription Factor Binding Site Information

Escherichia coli - NC_000913.3
CRP [UniProtKB:P0ACJ8, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CGTGAGCAATATCACG + [1687186, 1687201] 15150239 Experimental technique details Ad-hoc qualitative phenotype observation (ECO:0005674) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qPCR [quantitative real-time] (ECO:0005660) - 978

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... fumA fumC manA ydgA
Gene Locus tag Description
fumA b1612 fumarate hydratase (fumarase A), aerobic Class I
fumC b1611 fumarate hydratase (fumarase C),aerobic Class II
manA b1613 mannose-6-phosphate isomerase
ydgA b1614 conserved protein, DUF945 family