Transcription Factor Binding Site Information

Escherichia coli - NC_000913.3
CRP [UniProtKB:P0ACJ8, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AGTGATCCAGGTCACG - [754867, 754882] 15150239 Experimental technique details Ad-hoc qualitative phenotype observation (ECO:0005674) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qPCR [quantitative real-time] (ECO:0005660) - 978

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... gltA sdhC sdhD sdhA sdhB
Gene Locus tag Description
gltA b0720 citrate synthase
sdhC b0721 succinate dehydrogenase, membrane subunit, binds cytochrome b556
sdhD b0722 succinate dehydrogenase, membrane subunit, binds cytochrome b556
sdhA b0723 succinate dehydrogenase, flavoprotein subunit
sdhB b0724 succinate dehydrogenase, FeS subunit