Transcription Factor Binding Site Information

Escherichia coli - NC_007779.1
CsgD [UniProtKB:P52106, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TAATACGAATGAAT - [1028295, 1028308] 21421764 Experimental technique details Beta-gal reporter assay - Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details Multiple sequence alignment (MSA) (ECO:0005556) - 994

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... yccT mgsA yccU
Gene Locus tag Description
yccT Y75_p0936 hypothetical protein
mgsA Y75_p0935 methylglyoxal synthase
yccU Y75_p0937 CoA-binding protein with NAD(P)-binding Rossmann-fold domain