Transcription Factor Binding Site Information

Escherichia coli - NC_007779.1
CsgD [UniProtKB:P52106, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
AACAGGGAGTAAAA - [3301135, 3301148] 21421764 Experimental technique details Beta-gal reporter assay - Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details Multiple sequence alignment (MSA) (ECO:0005556) - 994

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... yhbT yhbS yhbU yhbV yhbW
Gene Locus tag Description
yhbT Y75_p3079 lipid carrier protein
yhbS Y75_p3078 acyltransferase
yhbU Y75_p3080 peptidase, collagenase-like
yhbV Y75_p3081 protease
yhbW Y75_p3082 hypothetical protein