Site information for: VqsM in species Pseudomonas aeruginosa; genome accession: NC

Transcription Factor Binding Site Information

dbxref: CollecTF:EXPSITE_0002c370
Genome: Pseudomonas aeruginosa - NC_002516.2
TF: VqsM [UniProtKB:Q9I1P2, view regulon]

Supporting Evidence

Binding site	Location	Publication	Experimental techniques used	Curation
GGATATTTTCGGACA	+ [2451243, 2451257]	25034696	Experimental technique details Consensus search (ECO:0005624) Consensus search - ECO:0005624 This is a weak form of in-silico search, in which the consensus sequence for the motif is compared to genomic positions and the number of mismatches (between candidate site and consensus) is used as a measure of site-quality. -	1014

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

Gene	Locus tag	Description
PA2230	PA2230	hypothetical protein
PA2229	PA2229	hypothetical protein
PA2225	PA2225	hypothetical protein
PA2226	PA2226	hypothetical protein
vqsM	PA2227	AraC family transcriptional regulator
PA2228	PA2228	hypothetical protein