Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_0002dd80
Genome
Lactococcus lactis - NC_002662.1
TF
CopR [UniProtKB:Q9CHA6, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GATTACATATGTAAAC - [1991994, 1992009] 17993525 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details MALDI-TOF Mass Spectrometry (ECO:0005527) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 1108

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ytjD ytjA L200070
Gene Locus tag Description
ytjD L174788 hypothetical protein
ytjA L173045 hypothetical protein
L200070 L200070 manganese transporter