List of publications in CollecTF

All papers that are present in the database are displayed below. The rows colored with greenare papers that are already curated. The yellow ones are assigned to somebody and waiting to be curated (hopefully) soon. The red ones are not assigned to anyone yet.

PMID Title TF Species
9987115 CtsR, a novel regulator of stress and heat shock response, controls clp and molecular chaperone gene expression in gram-positive bacteria. CtsR Bacillus subtillis
9891797 Anaerobic growth of a "strict aerobe" (Bacillus subtilis). FNR Bacillus subtilis
9885192 The PecT repressor coregulates synthesis of exopolysaccharides and virulence factors in Erwinia chrysanthemi. PecT Erwinia chrysanthemi
9864326 Kinetics of nirS expression (cytochrome cd1 nitrite reductase) in Pseudomonas stutzeri during the transition from aerobic respiration to denitrification: evidence for a denitrification-specific nitrate- and nitrite-responsive regulatory system. DnrD Pseudomonas stutzeri
9858745 Transcriptional activation of the catechol and chlorocatechol operons: variations on a theme. ClcR Pseudomonas putida
9858743 Recognition of binding sites I and II by the TrpI activator protein of pseudomonas aeruginosa: efficient binding to both sites requires InGP even when site II is replaced by site I. TrpI Pseudomonas aeruginosa
9857196 The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operator. CopG Streptococcus agalactiae
9852033 The fur-regulated gene encoding the alternative sigma factor PvdS is required for iron-dependent expression of the LysR-type regulator ptxR in Pseudomonas aeruginosa. PtxR Pseudomonas aeruginosa
9852010 Expression of the Bacillus subtilis acsA gene: position and sequence context affect cre-mediated carbon catabolite repression. CcpA Bacillus subtilis
9851988 The arcABDC gene cluster, encoding the arginine deiminase pathway of Bacillus licheniformis, and its activation by the arginine repressor argR. ArgR Bacillus licheniformis
9837975 Characterization of the interaction between Fur and the iron transport promoter of the virulence plasmid in Vibrio anguillarum. Fur Vibrio anguillarum
9829934 Characterization of CorR, a transcriptional activator which is required for biosynthesis of the phytotoxin coronatine. CorR Pseudomonas syringae pv. glycinea PG4180
9821257 Isopropylbenzene catabolic pathway in Pseudomonas putida RE204: nucleotide sequence analysis of the ipb operon and neighboring DNA from pRE4. XylS Pseudomonas putida
9811655 Transcriptional activation of the Bacillus subtilis ackA gene requires sequences upstream of the promoter. CcpA Bacillus subtilis
9811636 Identification of a zinc-specific metalloregulatory protein, Zur, controlling zinc transport operons in Bacillus subtilis. Zur Bacillus subtilis
9804853 CrtJ bound to distant binding sites interacts cooperatively to aerobically repress photopigment biosynthesis and light harvesting II gene expression in Rhodobacter capsulatus. CrtJ Rhodobacter capsulatus SB1003
9804852 Aerobic repression of the Rhodobacter capsulatus bchC promoter involves cooperative interactions between CrtJ bound to neighboring palindromes. CrtJ Rhodobacter capsulatus
9791125 Transcriptional regulation of the Streptococcus mutans gal operon by the GalR repressor. GalR Streptococcus mutans
9791103 Molecular characterization and regulation of an operon encoding a system for transport of arginine and ornithine and the ArgR regulatory protein in Pseudomonas aeruginosa. ArgR Pseudomonas aeruginosa
9786188 In vivo analysis of the interactions of the LysR-like regulator SpvR with the operator sequences of the spvA and spvR virulence genes of Salmonella typhimurium. SpvR Salmonella typhimurium
9784364 Binding of the fur (ferric uptake regulator) repressor of Escherichia coli to arrays of the GATAAT sequence.
9781878 Integration of the quorum-sensing system in the regulatory networks controlling virulence factor synthesis in Erwinia chrysanthemi. ExpR Erwinia chrysanthemi
9781877 Characterization of the Erwinia chrysanthemi expI-expR locus directing the synthesis of two N-acyl-homoserine lactone signal molecules. ExpR Erwinia chrysanthemi
9767578 Downregulation of Escherichia coli yfiD expression by FNR occupying a site at -93.5 involves the AR1-containing face of FNR. FNR Escherichia coli
9748437 Mutation analysis of PobR and PcaU, closely related transcriptional activators in acinetobacter. PcaU Acinetobacter
9747714 Identification of the DNA-binding sites for two response regulators involved in control of bacteriocin synthesis in Lactobacillus plantarum C11. PlnC Lactobacillus plantarum C11
9724772 An SmtB-like repressor from Synechocystis PCC 6803 regulates a zinc exporter. ZiaR Synechocystis PCC 6803
9724648 Active recruitment of sigma54-RNA polymerase to the Pu promoter of Pseudomonas putida: role of IHF and alphaCTD. IHF Pseudomonas putida
9721281 The Pseudomonas aeruginosa rhlG gene encodes an NADPH-dependent beta-ketoacyl reductase which is specifically involved in rhamnolipid synthesis. LasR Pseudomonas aeruginosa
9712757 SirR, a novel iron-dependent repressor in Staphylococcus epidermidis. SirR Staphylococcus epidermidis
9701817 Analysis of ToxR-dependent transcription activation of ompU, the gene encoding a major envelope protein in Vibrio cholerae. ToxR Vibrio Cholera
9696769 Fnr, NarP, and NarL regulation of Escherichia coli K-12 napF (periplasmic nitrate reductase) operon transcription in vitro. Fnr, NarP, NarL E. Coli
9696753 cis-acting sequences required for NtcB-dependent, nitrite-responsive positive regulation of the nitrate assimilation operon in the cyanobacterium Synechococcus sp. strain PCC 7942. NtcB Synechococcus sp. strain PCC 7942
9666063 The mannitol utilization genes of Pseudomonas fluorescens are regulated by an activator: cloning, nucleotide sequence and expression of the mtlR gene. MtlR Pseudomonas
9660820 DNA binding characteristics of RegA. A constitutively active anaerobic activator of photosynthesis gene expression in Rhodobacter capsulatus. RegA Rhodobacter capsulatus
9620982 The FixK2 protein is involved in regulation of symbiotic hydrogenase expression in Bradyrhizobium japonicum. FixK2 Bradyrhizobium japonicum
9620970 Characterization of the hcnABC gene cluster encoding hydrogen cyanide synthase and anaerobic regulation by ANR in the strictly aerobic biocontrol agent Pseudomonas fluorescens CHA0. Anr Pseudomonas
9611818 Comparison of PhoP binding to the tuaA promoter with PhoP binding to other Pho-regulon promoters establishes a Bacillus subtilis Pho core binding site. PhoP Bacillus subtilis
9603869 Effects of iron and temperature on expression of the Pseudomonas aeruginosa tolQRA genes: role of the ferric uptake regulator. Fur Pseudomonas aeruginosa
9603867 Expression of the transposase gene tnpA of Tn4652 is positively affected by integration host factor. IHF Pseudomonas putida
9603811 Towards a biocatalyst for (S)-styrene oxide production: characterization of the styrene degradation pathway of Pseudomonas sp. strain VLB120. StdR Pseudomonas
9585513, 12490720, 11918817 The competence transcription factor of Bacillus subtilis recognizes short A/T-rich sequences arranged in a unique, flexible pattern along the DNA helix. ComK Bacillus subtilis
9583950 Identification of Btr-regulated genes using a titration assay. Search for a role for this transcriptional regulator in the growth and virulence of Bordetella pertussis. Btr Bordetella pertussis
9573203 Regulation of benzoate degradation in Acinetobacter sp. strain ADP1 by BenM, a LysR-type transcriptional activator. BenM Acinetobacter sp. strain ADP1
9573187 Transcriptional repression mediated by LysR-type regulator CatR bound at multiple binding sites. CatR Pseudomonas putida
9573161 Joint transcriptional control of xpsR, the unusual signal integrator of the Ralstonia solanacearum virulence gene regulatory network, by a response regulator and a LysR-type transcriptional activator. PhcA Ralstonia solanacearum
9561747 In vitro interaction of the IHF-like proteins Acinetobacter junii and Proteus vulgaris with ihf sites. IHF Acinetobacter junii, Proteus vulgaris
9555902 A membrane-associated protein, FliX, is required for an early step in Caulobacter flagellar assembly. CtrA Caulobacter crescentus
9537357 The CIRCE element and its putative repressor control cell cycle expression of the Caulobacter crescentus groESL operon. HrcA Caulobacter crescentus
9535087 Identification of a regulatory protein required for pressure-responsive gene expression in the deep-sea bacterium Photobacterium species strain SS9. ToxR Photobacterium strain SS9.
9534240 A novel regulatory switch mediated by the FNR-like protein of Lactobacillus casei. FnrL Lactobacillus casei
9532784 Identification of the promoter region and the transcriptional regulatory sequence of the evgAS operon of Escherichia coli. EvgA Escherichia coli
9524276 Characterisation of the urease gene cluster in Bordetella bronchiseptica. BbuR Bordetella bronchiseptica
9515921 PcaU, a transcriptional activator of genes for protocatechuate utilization in Acinetobacter. PcaU Acinetobacter sp. ADP1
9512521 Cell cycle-dependent transcriptional and proteolytic regulation of FtsZ in Caulobacter. CtrA Caulobacter crescentus
9495743 Genetic and functional analysis of the styrene catabolic cluster of Pseudomonas sp. strain Y2. StyR Pseudomonas
9485406 X-ray absorption spectroscopy of a new zinc site in the fur protein from Escherichia coli.
9484902 Regulation of transcription initiation at the Escherichia coli nir operon promoter: a new mechanism to account for co-dependence on two transcription factors. Fis Escherichia coli
9435261 TcpP protein is a positive regulator of virulence gene expression in Vibrio cholerae. TcpP Vibrio cholerae
9427395 SOS induction in mycobacteria: analysis of the DNA-binding activity of a LexA-like repressor and its role in DNA damage induction of the recA gene from Mycobacterium smegmatis. LexA Mycobacterium smegmatis
9426143 Antagonistic effect of CRP and KdgR in the transcription control of the Erwinia chrysanthemi pectinolysis genes. Crp Erwinia chrysanthemi
9401045 Regulation of ornithine utilization in Pseudomonas aeruginosa (PAO1) is mediated by a transcriptional regulator, OruR. OruR Pseudomonas aeruginosa
9401028 Cloning, functional analysis, and transcriptional regulation of the Bacillus subtilis araE gene involved in L-arabinose utilization. AraR Bacillus subtilis 168
9393689 Analysis of the fnrL gene and its function in Rhodobacter capsulatus. FnrL Rhodobacter capsulatus
9388231 The maltose/maltodextrin regulon of Streptococcus pneumoniae. Differential promoter regulation by the transcriptional repressor MalR. MalR Streptococcus pneumoniae
9353044 Transcription of the Corynebacterium diphtheriae hmuO gene is regulated by iron and heme. DtxR Corynebacterium diphtheriae
9352923 A tricarboxylic acid cycle intermediate regulating transcription of a chloroaromatic biodegradative pathway: fumarate-mediated repression of the clcABD operon. ClcR Pseudomonas putida
9352913 Catabolite repression in Lactobacillus casei ATCC 393 is mediated by CcpA. CcpA Lactobacillus casei ATCC 393
9341681 Interaction of the regulator proteins RcsA and RcsB with the promoter of the operon for amylovoran biosynthesis in Erwinia amylovora. RcsB Erwinia amylovora
9324268 Constitutive expression of fibronectin binding in Streptococcus pyogenes as a result of anaerobic activation of rofA. RofA Streptococcus pyogenes SF370
9317037 Identification and characterization of three new promoter/operators from Corynebacterium diphtheriae that are regulated by the diphtheria toxin repressor (DtxR) and iron. DtxR Corynebacterium diphtheriae
9312050 The Na+-specific interaction between the LysR-type regulator, NhaR, and the nhaA gene encoding the Na+/H+ antiporter of Escherichia coli. NhaR Escherichia coli
9303558 Electrospray ionization mass spectrometry analysis of the apo- and metal-substituted forms of the Fur protein.
9294432 Roles of Pseudomonas aeruginosa las and rhl quorum-sensing systems in control of elastase and rhamnolipid biosynthesis genes. RpoN, RhlR, LasR Pseudomonas aeruginosa, Escherichia coli
9293185 Signal transduction and transcriptional and posttranscriptional control of iron-regulated genes in bacteria. Fur
9286981 Purification and characterization of an arginine regulatory protein, ArgR, from Pseudomonas aeruginosa and its interactions with the control regions for the car, argF, and aru operons. ArgR Pseudomonas aeruginosa
9286980 Cloning and characterization of argR, a gene that participates in regulation of arginine biosynthesis and catabolism in Pseudomonas aeruginosa PAO1. ArgR Pseudomonas aeruginosa
9282734 Arginine boxes and the argR gene in Streptomyces clavuligerus: evidence for a clear regulation of the arginine pathway. ArgR Streptomyces clavuligerus NRRL 3585
9254709 Contacts between Bacillus subtilis catabolite regulatory protein CcpA and amyO target site. CcpA Bacillus subtilis
9228751 Evidence for regulation of the NADH peroxidase gene (npr) from Enterococcus faecalis by OxyR. OxyR Enterococcus faecalis
9223636 In vitro binding of the response regulator CitB and of its carboxy-terminal domain to A + T-rich DNA target sequences in the control region of the divergent citC and citS operons of Klebsiella pneumoniae. CitB Klebsiella pneumoniae
9220004 DNase I footprinting, DNA bending and in vitro transcription analyses of ClcR and CatR interactions with the clcABD promoter: evidence of a conserved transcriptional activation mechanism. ClcR Pseudomonas putida
9218775 Cloning, sequence and mutagenesis of the structural gene of Pseudomonas aeruginosa CysB, which can activate algD transcription. CysB Pseudomonas aeruginosa
9218770 Genetic analysis of pertussis toxin promoter activation in Bordetella pertussis. BvgA Bordetella pertussis
9218481 DNA binding characteristics of CrtJ. A redox-responding repressor of bacteriochlorophyll, carotenoid, and light harvesting-II gene expression in Rhodobacter capsulatus. CrtJ Rhodobacter capsulatus
9202484 The aldA gene of Escherichia coli is under the control of at least three transcriptional regulators. CRP Escherichia coli
9190808 Vfr controls quorum sensing in Pseudomonas aeruginosa. Vfr Pseudomonas aeruginosa
9171432 Characterization of DNA binding sites for the BvgA protein of Bordetella pertussis. BvgA Bordetella pertussis
9171413 2-chloromuconate and ClcR-mediated activation of the clcABD operon: in vitro transcriptional and DNase I footprint analyses. ClcR Pseudomonas putida
9157253 Transcriptional activation by FNR and CRP: reciprocity of binding-site recognition. crp,fnr Escherichia coli
9150205 Regulation of las and rhl quorum sensing in Pseudomonas aeruginosa. LasR Pseudomonas aeruginosa
9102460 Cooperative and non-cooperative DNA binding modes of catabolite control protein CcpA from Bacillus megaterium result from sensing two different signals. CcpA Bacillus megaterium
9084157 Activation of the Erwinia carotovora subsp. carotovora pectin lyase structural gene pnlA: a role for RdgB. RdgB Erwinia carotovora subsp. carotovora Ecc71
9083014 CopY is a copper-inducible repressor of the Enterococcus hirae copper ATPases. CopY Enterococcus hirae
9079907 Activation of the catBCA promoter: probing the interaction of CatR and RNA polymerase through in vitro transcription. CatR Pseudomonas putida
9079904 Cloning and characterization of an Mn-containing superoxide dismutase (SodA) of Bordetella pertussis. Fur Bordetella pertussis
9068646 Transcriptional activation of the bkd operon of Pseudomonas putida by BkdR. BkdR Pseudomonas putida
9068635 Regulation of the Salmonella typhimurium pepT gene by cyclic AMP receptor protein (CRP) and FNR acting at a hybrid CRP-FNR site. crp,fnr
9045799 An operon containing fumC and sodA encoding fumarase C and manganese superoxide dismutase is controlled by the ferric uptake regulator in Pseudomonas aeruginosa: fur mutants produce elevated alginate levels. Fur Pseudomonas aeruginosa
9037074 A bacterial basic region leucine zipper histidine kinase regulating toluene degradation. TodS Pseudomonas putida
9023188 Characterization and regulation of the gene encoding nitrite reductase in Rhodobacter sphaeroides 2.4.3. NnrR Rhodobacter sphaeroides
8932299 Role of the Escherichia coli FadR regulator in stasis survival and growth phase-dependent expression of the uspA, fad, and fab genes. FadR Escherichia coli
8899712 Identification and characterization of AlgZ, an AlgT-dependent DNA-binding protein required for Pseudomonas aeruginosa algD transcription. AlgZ Pseudomonas aeruginosa
8892835 The DnrN protein of Streptomyces peucetius, a pseudo-response regulator, is a DNA-binding protein involved in the regulation of daunorubicin biosynthesis. DnrN Streptomyces peucetius
8885394 Isolation of an IHF-deficient mutant of a Pseudomonas aeruginosa mucoid isolate and evaluation of the role of IHF in algD gene expression. IHF Pseudomonas aeruginosa
8885270 Ferric uptake regulator mutants of Pseudomonas aeruginosa with distinct alterations in the iron-dependent repression of exotoxin A and siderophores in aerobic and microaerobic environments. Fur Pseudomonas aeruginosa
8878037 Catabolite repression mediated by the catabolite control protein CcpA in Staphylococcus xylosus. CcpA Staphylococcus xylosus
8866479 Differential binding of BvgA to two classes of virulence genes of Bordetella pertussis directs promoter selectivity by RNA polymerase. BvgA Bordetella pertussis
8830686 CodY is required for nutritional repression of Bacillus subtilis genetic competence. CodY Bacillus subtilis
8810514 Purification and characterization of LasR as a DNA-binding protein. LasR Pseudomonas aeruginosa
8808923 PfeR, an enterobactin-responsive activator of ferric enterobactin receptor gene expression in Pseudomonas aeruginosa. PfeR Pseudomonas aeruginosa
8806672 The Pseudomonas aeruginosa fumc and soda genes belong to an iron-responsive operon. FUR Pseudomonas aeruginosa
8793880 Interaction of CodY, a novel Bacillus subtilis DNA-binding protein, with the dpp promoter region. CodY Bacillus subtilis
8793875 A single substitution in the putative helix-turn-helix motif of the pleiotropic activator PrfA attenuates Listeria monocytogenes virulence. PrfA Listeria monocytogenes
8759915 A transcription factor with a leucine-zipper motif involved in light-dependent inhibition of expression of the puf operon in the photosynthetic bacterium Rhodobacter sphaeroides. SPB Rhodobacter sphaeroides
8759870 Analysis of Fur binding to operator sequences within the Neisseria gonorrhoeae fbpA promoter. Fur Neisseria gonorrhoeae
8755903 Regulated expression of a repressor protein: FadR activates iclR. FadR Escherichia coli
8736528 Phosphorylation-dependent binding of BvgA to the upstream region of the cyaA gene of Bordetella pertussis. BvgA Bordetella pertussis
8682810 The binding site of the IclR repressor protein overlaps the promoter of aceBAK. IclR Escherichia coli
8682773 Growth phase-dependent transcription of the sigma(54)-dependent Po promoter controlling the Pseudomonas-derived (methyl)phenol dmp operon of pVI150. DmpR Pseudomonas putida
8676390 Sequence-specific DNA binding of the phage Mu C protein: footprinting analysis reveals altered DNA conformation upon protein binding. RepC Escherichia phage Mu
8670279 Stoichiometry of BkdR to substrate DNA in Pseudomonas putida. BkdR Pseudomonas putida
8664494 Sequence and expression analysis of the hrpB pathogenicity operon of Xanthomonas campestris pv. vesicatoria which encodes eight proteins with similarity to components of the Hrp, Ysc, Spa, and Fli secretion systems. HrpB Xanthomonas campestris pv. vesicatoria
8655542 HrpXv, an AraC-type regulator, activates expression of five of the six loci in the hrp cluster of Xanthomonas campestris pv. vesicatoria. HrpX Xanthomonas campestris pv. vesicatoria
8636031 Iron-regulated transcription of the pvdA gene in Pseudomonas aeruginosa: effect of Fur and PvdS on promoter activity. Fur / PvdS Pseudomonas aeruginosa
8633080 Gene repression by the ferric uptake regulator in Pseudomonas aeruginosa: cycle selection of iron-regulated genes. Fur Pseudomonas aeruginosa
8631692 DNA binding of the Bordetella pertussis H1 homolog alters in vitro DNA flexibility. BpH1 Bordetella pertussis
8628229 Molecular analysis of the phosphate-specific transport (pst) operon of Pseudomonas aeruginosa. PhoB Pseudomonas aeruginosa
8626326 PchR, a regulator of ferripyochelin receptor gene (fptA) expression in Pseudomonas aeruginosa, functions both as an activator and as a repressor. PchR Pseudomonas aeruginosa
8606177 Promoters controlling expression of the alternative nitrogenase and the molybdenum uptake system in Rhodobacter capsulatus are activated by NtrC, independent of sigma54, and repressed by molybdenum. NtrC Rhodobacter capsulatus
8606153 In vitro binding of the Salmonella dublin virulence plasmid regulatory protein SpvR to the promoter regions of spvA and spvR. SpvR Salmonella dublin
8604128 Nitrate and nitrite-mediated transcription antitermination control of nasF (nitrate assimilation) operon expression in Klebsiella pheumoniae M5al. NtrC Klebsiella pheumoniae M5al
8596455 The regulator of streptomycin gene expression, StrR, of Streptomyces griseus is a DNA binding activator protein with multiple recognition sites. StrR Streptomyces griseus
8594330 Unusual regulatory mechanism for a Streptomyces multidrug resistance gene, ptr, involving three homologous protein-binding sites overlapping the promoter region. Pip Streptomyces pristinaespiralis
8577745 Isolation of an oxygen-sensitive FNR protein of Escherichia coli: interaction at activator and repressor sites of FNR-controlled genes. FNR Escherichia coli
8576068 Genetic evidence for an activator required for induction of colicin-like bacteriocin 28b production in Serratia marcescens by DNA-damaging agents. OgR Serratia marcescens
8576049 Analysis of the Pseudomonas aeruginosa elastase (lasB) regulatory region. LasR Pseudomonas aeruginosa
8576041 Genetic analysis of the interaction between Vibrio cholerae transcription activator ToxR and toxT promoter DNA. ToxR Vibrio cholerae
8550545 Characterization of a CO-responsive transcriptional activator from Rhodospirillum rubrum. CooA Rhodospirillum rubrum
8548829 Cell cycle control by an essential bacterial two-component signal transduction protein. CtrA Caulobacter crescentus
8522528 Role of the ferric uptake regulator of Pseudomonas aeruginosa in the regulation of siderophores and exotoxin A expression: purification and activity on iron-regulated promoters. Fur Pseudomonas aeruginosa
8522507 Repression of 4-hydroxybenzoate transport and degradation by benzoate: a new layer of regulatory control in the Pseudomonas putida beta-ketoadipate pathway. PcaR Pseudomonas putida
8487297 Highly cooperative DNA binding by the coliphage HK022 repressor. CI Lambdoid phage HK022
8419352 Activation of the Escherichia coli nitrate reductase (narGHJI) operon by NarL and Fnr requires integration host factor. IHF Escherichia coli
8419291 Nucleotide sequence and initial functional characterization of the clcR gene encoding a LysR family activator of the clcABD chlorocatechol operon in Pseudomonas putida. ClcR Pseudomonas putida
8412671 Iron and oxygen regulation of Escherichia coli MnSOD expression: competition between the global regulators Fur and ArcA for binding to DNA. Fur, ArcA Escherichia coli
8411148 Interactions of NodD at the nod Box: NodD binds to two distinct sites on the same face of the helix and induces a bend in the DNA. NodD Rhizobium meliloti
8406003 The activity of the Escherichia coli transcription factor FNR is regulated by a change in oligomeric state. FNR Escherichia coli
8396117 Metalloregulation in Bacillus subtilis: isolation and characterization of two genes differentially repressed by metal ions. Fur Bacillus subtilis
8381538 Inhibitors of two-component signal transduction systems: inhibition of alginate gene activation in Pseudomonas aeruginosa. AlgR1 Pseudomonas aeruginosa
8376338 Characterization of the promoter of avirulence gene D from Pseudomonas syringae pv. tomato. HrpS Pseudomonas syringae pv. tomato
8376330 Regulation of the pcaIJ genes for aromatic acid degradation in Pseudomonas putida. PcaR Pseudomonas putida
8366031 Enhancer-like activity of A1gR1-binding site in alginate gene activation: positional, orientational, and sequence specificity. AlgR1 Pseudomonas aeruginosa
8331077 Identification of the transcriptional activator pobR and characterization of its role in the expression of pobA, the structural gene for p-hydroxybenzoate hydroxylase in Acinetobacter calcoaceticus. PobR Acinetobacter calcoaceticus
8282702 Analysis of the complexity of gene regulation by fur in Vibrio cholerae.
8253692 Regulation of the catechol 1,2-dioxygenase- and phenol monooxygenase-encoding pheBA operon in Pseudomonas putida PaW85. CatR Pseudomonas putida
8253671 Evidence for autoregulation of camR, which encodes a repressor for the cytochrome P-450cam hydroxylase operon on the Pseudomonas putida CAM plasmid. CamR Pseudomonas putida (ATCC 17453)
8226674 Structural organization, nucleotide sequence, and regulation of the Haemophilus influenzae rec-1+ gene. LexA, IHF, CRP Haemophilus influenzae
8226643 The active form of the KorB protein encoded by the Streptomyces plasmid pIJ101 is a processed product that binds differentially to the two promoters it regulates. KorB Streptomyces lividans
8198594 Fur (ferric uptake regulation) protein interaction with target DNA: comparison of gel retardation, footprinting and electron microscopy analyses.
8197169 The Caulobacter crescentus FlbD protein acts at ftr sequence elements both to activate and to repress transcription of cell cycle-regulated flagellar genes. FlbD Caulobacter crescentus
8188613 A single promoter sequence recognized by a newly identified alternate sigma factor directs expression of pathogenicity and host range determinants in Pseudomonas syringae. HrpL Pseudomonas
8188582 A LuxR-LuxI type regulatory system activates Agrobacterium Ti plasmid conjugal transfer in the presence of a plant tumor metabolite. TraR Agrobacterium tumefaciens
8161518 Identification of the DNA-binding site for the phosphorylated VanR protein required for vancomycin resistance in Enterococcus faecium. VanS Enterococcus faecium
8144450 Analysis of the binding site of the LysR-type transcriptional activator TcbR on the tcbR and tcbC divergent promoter sequences. TcbR Pseudomonas
8144448 Regulation of the Escherichia coli lrp gene. Lrp Escherichia coli
8138132 Regulation of the rpoN, ORF102 and ORF154 genes in Pseudomonas putida. RpoN Pseudomonas putida
8107872 DNA recognition by beta-sheets in the Arc repressor-operator crystal structure. Arc Escherichia coli bacteriophage P22
8107138 Fur regulon in gram-negative bacteria. Identification and characterization of new iron-regulated Escherichia coli genes by a fur titration assay.
8106325 Cloning, sequence, and footprint analysis of two promoter/operators from Corynebacterium diphtheriae that are regulated by the diphtheria toxin repressor (DtxR) and iron. DtxR Corynebacterium diphtheriae
8083169 Characterization of the pcaR regulatory gene from Pseudomonas putida, which is required for the complete degradation of p-hydroxybenzoate. PcaR Pseudomonas putida
8083157 Identification, cloning, and sequencing of a gene required for ferric vibriobactin utilization by Vibrio cholerae. Fur Vibrio cholerae
8078459 Purification and characterization of CopR, a transcriptional activator protein that binds to a conserved domain (cop box) in copper-inducible promoters of Pseudomonas syringae. CopR Pseudomonas syringae
8071232 Purification of the LysR family regulator, ClcR, and its interaction with the Pseudomonas putida clcABD chlorocatechol operon promoter. ClcR Pseudomonas putida
8051019 Integration host factor and sequences downstream of the Pseudomonas aeruginosa algD transcription start site are required for expression. IHF Pseudomonas aeruginosa
8022270 Repression of tonB transcription during anaerobic growth requires Fur binding at the promoter and a second factor binding upstream. Fur Escherichia coli K-12
8021213 Regulation of p-hydroxybenzoate hydroxylase synthesis by PobR bound to an operator in Acinetobacter calcoaceticus. PobR Acinetobacter calcoaceticus ADP1
8021189 Autoregulation of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis. HipAB Escherichia coli
7968919 Genetic regulation of nitrogen fixation in rhizobia. FixK Rhizobium meliloti, Bradyrhizobium japonicum, Azorhizobium caulinodans
7966270 Transcription of the xyl operon is controlled in Bacillus subtilis by tandem overlapping operators spaced by four base-pairs. Xyl Bacillus subtillis
7961501 Regulation of the transfer genes of Streptomyces plasmid pSN22: in vivo and in vitro study of the interaction of TraR with promoter regions. TraR Streptomyces nigrifaciens plasmid pSN22
7928961 Transcriptional analysis of the Pseudomonas aeruginosa genes algR, algB, and algD reveals a hierarchy of alginate gene expression which is modulated by algT. AlgT Pseudomonas aeruginosa
7883704 Aromatic effector activation of the NtrC-like transcriptional regulator PhhR limits the catabolic potential of the (methyl)phenol degradative pathway it controls. PhhR Pseudomonas putida
7836297 Characterization of BkdR-DNA binding in the expression of the bkd operon of Pseudomonas putida. BkdR Pseudomonas putida
7830555 Transcriptional control of toxT, a regulatory gene in the ToxR regulon of Vibrio cholerae. ToxR Vibrio cholerae
7814330 Discontinuities in the evolution of Pseudomonas putida cat genes. CatR Pseudomonas putida
7809047 Interaction of two LysR-type regulatory proteins CatR and ClcR with heterologous promoters: functional and evolutionary implications. CatR Pseudomonas putida
7790062 Cloning and genetic characterization of the flagellum subunit gene (flaA) of Legionella pneumophila serogroup 1. sigma-28 Legionella pneumophila serogroup 1
7783622 Purification, characterization and mode of action of PdhR, the transcriptional repressor of the pdhR-aceEF-lpd operon of Escherichia coli. PdhR Escherichia coli
7783616 comK encodes the competence transcription factor, the key regulatory protein for competence development in Bacillus subtilis. ComK Bacillus subtilis
7768824 Global regulation of a sigma 54-dependent flagellar gene family in Caulobacter crescentus by the transcriptional activator FlbD. FlbD Caulobacter crescentus
7768809 Purification and characterization of a cam repressor (CamR) for the cytochrome P-450cam hydroxylase operon on the Pseudomonas putida CAM plasmid. CamR Pseudomonas putida
7768793 Characterization of an aerobic repressor that coordinately regulates bacteriochlorophyll, carotenoid, and light harvesting-II expression in Rhodobacter capsulatus. CrtJ Rhodobacter capsulatus
7765895 Cloning and initial characterization of the Bordetella pertussis fur gene. Fur Bordetella pertussis
7752891 The hrpRS locus of Pseudomonas syringae pv. phaseolicola constitutes a complex regulatory unit. HrpR Pseudomonas
7747934 The FNR family of transcriptional regulators. FNR Escherichia coli, Shewanella putrefaciens, Pseudomonas aeruginosa, Pseudomonas stutzeri, Rhodopseudo
7715443 PilR, a transcriptional regulator of piliation in Pseudomonas aeruginosa, binds to a cis-acting sequence upstream of the pilin gene promoter. PilR Pseudomonas aeruginosa
7707370 Transcription of repA, the gene of the initiation protein of the Pseudomonas plasmid pPS10, is autoregulated by interactions of the RepA protein at a symmetrical operator. RepA Pseudomonas
7693653 Transcription of the cam operon and camR genes in Pseudomonas putida PpG1. CamR Pseudomonas putida
7665492 Specificity of DNA binding activity of the Bacillus subtilis catabolite control protein CcpA. CcpA Bacillus subtilis
7665470 DNA binding sites of the LysR-type regulator GcvA in the gcv and gcvA control regions of Escherichia coli. GcvA Escherichia coli
7643383 Nitrate and nitrite regulation of the Fnr-dependent aeg-46.5 promoter of Escherichia coli K-12 is mediated by competition between homologous response regulators (NarL and NarP) for a common DNA-binding site. NarL E. Coli
7642488 Fur regulon of Salmonella typhimurium: identification of new iron-regulated genes. Fur Salmonella enterica subsp. enterica serovar Typhimurium
7635828 Analyses of the DNA-binding and transcriptional activation properties of ExsA, the transcriptional activator of the Pseudomonas aeruginosa exoenzyme S regulon. ExsA Pseudomonas aeruginosa
7623664 Iron regulation of siderophore biosynthesis and transport in Pseudomonas putida WCS358: involvement of a transcriptional activator and of the Fur protein. Fur Pseudomonas putida
7604006 Autoinducer-mediated regulation of rhamnolipid biosurfactant synthesis in Pseudomonas aeruginosa. RhlR, RhlI Pseudomonas aeruginosa
7596284 Differential DNA bending introduced by the Pseudomonas putida LysR-type regulator, CatR, at the plasmid-borne pheBA and chromosomal catBC promoters. CatR Pseudomonas putida strain PaW85
7592486 Two different mechanisms mediate catabolite repression of the Bacillus subtilis levanase operon. CcpA Bacillus subtilis
7592424 Synergistic binding of RNA polymerase and BvgA phosphate to the pertussis toxin promoter of Bordetella pertussis. BvgA Bordetella pertussis
7592340 catM encodes a LysR-type transcriptional activator regulating catechol degradation in Acinetobacter calcoaceticus. CatM Acinetobacter calcoaceticus
7592337 Purification and characterization of the Pseudomonas aeruginosa NfxB protein, the negative regulator of the nfxB gene. NfxB Pseudomonas aeruginosa
7591059 Characterization of an iron-dependent regulatory protein (IdeR) of Mycobacterium tuberculosis as a functional homolog of the diphtheria toxin repressor (DtxR) from Corynebacterium diphtheriae. IdeR Corynebacterium diphtheriae
7582000 Sequence, genetic analysis, and expression of Actinobacillus pleuropneumoniae transferrin receptor genes.
7565595 A binding site for activation by the Bacillus subtilis AhrC protein, a repressor/activator of arginine metabolism. AhrC Bacillus subtilis
7565090 Activation of a temporally regulated Caulobacter promoter by upstream and downstream sequence elements. IHF Caulobacter crescentus
7535376 Identification of a membrane protein and a truncated LysR-type regulator associated with the toluene degradation pathway in Pseudomonas putida F1. TodX Pseudomonas putida
7473744 The sixty nucleotide OccR operator contains a subsite essential and sufficient for OccR binding and a second subsite required for ligand-responsive DNA bending. OccR Agrobacterium tumefaciens
6769903 Iron uptake with ferripyochelin and ferric citrate by Pseudomonas aeruginosa. FUR
33834206 Crucial role of Salmonella genomic island 1 master activator in the parasitism of IncC plasmids. SgaCD AcaCD Salmonella enterica
33327941 Flexible comparative genomics of prokaryotic transcriptional regulatory networks. LexA Balneola vulgaris DSM 17893
3294800 Operator sequences of the aerobactin operon of plasmid ColV-K30 binding the ferric uptake regulation (fur) repressor.
3288541 Specific binding of proteins from Rhizobium meliloti cell-free extracts containing NodD to DNA sequences upstream of inducible nodulation genes. NodD Rhizobium meliloti
3062182 Metal ion regulation of gene expression. Fur repressor-operator interaction at the promoter region of the aerobactin system of pColV-K30.
2993806 Nucleotide sequence of the iron regulatory gene fur.
2963952 Molecular mechanism of regulation of siderophore-mediated iron assimilation.
2914951 Sequence-specific binding of arc repressor to DNA. Effects of operator mutations and modifications. Arc Escherichia coli bacteriophage P22
29018122 The BvgAS Regulon of <i>Bordetella pertussis</i>. BvgAS Bordetella pertussis Tohama I
28618189 Comparative genomics of the DNA damage-inducible network in the Patescibacteria. LexA Patescibacteria
28473807 FnrL and Three Dnr Regulators Are Used for the Metabolic Adaptation to Low Oxygen Tension in <i>Dinoroseobacter shibae</i>. FnrL, DnrE, DnrF Dinoroseobacter shibae
2836706 Genetic characterization and sequence analysis of the duplicated nifA/nifB gene region of Rhodobacter capsulatus. NifA Rhodobacter capsulatus
2823881 Ferric uptake regulation protein acts as a repressor, employing iron (II) as a cofactor to bind the operator of an iron transport operon in Escherichia coli.
2786868 Binding of the Citrobacter freundii AmpR regulator to a single DNA site provides both autoregulation and activation of the inducible ampC beta-lactamase gene. AmpR Citrobacter freundii
27489856 The Verrucomicrobia LexA-Binding Motif: Insights into the Evolutionary Dynamics of the SOS Response. LexA Verrucomicrobium spinosum DSM 4136, Opitutus terrae PB90-1
27325679 AlgU Controls Expression of Virulence Genes in Pseudomonas syringae pv. tomato DC3000. AlgU Pseudomonas syringae
2695393 Nucleotide sequences of the Erwinia chrysanthemi ogl and pelE genes negatively regulated by the kdgR gene product. CRP Erwinia chrysanthemi
26833411 The SOS Response Master Regulator LexA Regulates the Gene Transfer Agent of Rhodobacter capsulatus and Represses Transcription of the Signal Transduction Protein CckA. LexA Rhodobacter capsulatus B10/SB1003
26793169 Global Regulation of Gene Expression by the MafR Protein of Enterococcus faecalis. MafR Enterococcus faecalis
2666390 Identification of multiple repressor recognition sites in the hut system of Pseudomonas putida. HutC Pseudomonas putida
26537891 Analysis of the FnrL regulon in Rhodobacter capsulatus reveals limited regulon overlap with orthologues from Rhodobacter sphaeroides and Escherichia coli. FNR Rhodobacter capsulatus
2644221 Mechanism for iron-regulated transcription of the Escherichia coli cir gene: metal-dependent binding of fur protein to the promoters. Fur E. Coli
26150814 The regulatory function of LexA is temperature-dependent in the deep-sea bacterium Shewanella piezotolerans WP3. LexA Shewanella piezotolerans WP3
25986903 An SOS Regulon under Control of a Noncanonical LexA-Binding Motif in the Betaproteobacteria. LexA Gallionella capsiferriformans ES-2, Sideroxydans lithotrophicus ES-1
25662215 Transfer activation of SXT/R391 integrative and conjugative elements: unraveling the SetCD regulon. SetCD Vibrio cholerae
25622616 Identification and characterization of VpsR and VpsT binding sites in Vibrio cholerae. VpsR, VpsT Vibrio cholerae
25340549 The master activator of IncA/C conjugative plasmids stimulates genomic islands and multidrug resistance dissemination. AcaCD Vibrio cholerae
25313389 Inactivation of the organic hydroperoxide stress resistance regulator OhrR enhances resistance to oxidative stress and isoniazid in Mycobacterium smegmatis. OhrR Mycobacterium smegmatis
25294017 Three genes encoding citrate synthases in Saccharopolyspora erythraea are regulated by the global nutrient-sensing regulators GlnR, DasR, and CRP. CRP, GlnR, and DasR Saccharopolyspora erythraea
25239498 A transcriptional regulator Sll0794 regulates tolerance to biofuel ethanol in photosynthetic Synechocystis sp. PCC 6803. Sll0794 Synechocystis sp. PCC 6803
25237815 IscR Regulation of Capsular Polysaccharide Biosynthesis and Iron-Acquisition Systems in Klebsiella pneumoniae CG43. IscR Klebsiella pneumoniae CG43
25170934 Global analysis of the HrpL regulon in the plant pathogen Pseudomonas syringae pv. tomato DC3000 reveals new regulon members with diverse functions. HrpL Pseudomonas syringae pv. tomato DC3000
25112480 Functional and structural analysis of HicA3-HicB3, a novel toxin-antitoxin system of Yersinia pestis. HicB3 Yersinia pestis
25069875 Genome-wide comprehensive analysis of transcriptional regulation by ArgR in Thermus thermophilus. ArgR Thermus thermophilus HB8
2506133 Evidence for direct regulation of diphtheria toxin gene transcription by an Fe2+-dependent DNA-binding repressor, DtoxR, in Corynebacterium diphtheriae. DtoxR Corynebacterium diphtheriae
25056321 The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence. HipAB Shewanella oneidensis
25034696 Molecular mechanisms of master regulator VqsM mediating quorum-sensing and antibiotic resistance in Pseudomonas aeruginosa. VqsM Pseudomonas aeruginosa
25031425 Transcriptional regulation of the L-lactate permease gene lutP by the LutR repressor of Bacillus subtilis RO-NN-1. LutR Bacillus subtilis
25022856 Coregulated genes link sulfide:quinone oxidoreductase and arsenic metabolism in Synechocystis sp. strain PCC6803. suoR Synechocystis sp. strain PCC6803
25010795 PfsR is a key regulator of iron homeostasis in Synechocystis PCC 6803.
25009841 Managing oxidative stresses in Shewanella oneidensis: intertwined roles of the OxyR and OhrR regulons. OhrR Shewanella oneidensis
25009237 Control of chitin and N-acetylglucosamine utilization in Saccharopolyspora erythraea. DasR Saccharopolyspora erythraea
24982307 Genome-wide analysis of the role of global transcriptional regulator GntR1 in Corynebacterium glutamicum. GntR1 Corynebacterium glutamicum
24965736 Integration host factor is required for replication of pYGK-derived plasmids in Aggregatibacter actinomycetemcomitans. IHF Aggregatibacter actinomycetemcomitans
24963821 Strong inhibition of fimbrial 3 subunit gene transcription by a novel downstream repressive element in Bordetella pertussis. BvgA Bordetella pertussis
24957601 Genomic mapping of cAMP receptor protein (CRPMt) in Mycobacterium tuberculosis: relation to transcriptional start sites and the role of CRPMt as a transcription factor. CRP Mycobacterium tuberculosis
24951785 The pH-dependent expression of the urease operon in Streptococcus salivarius is mediated by CodY. CodY Streptococcus salivarius
24945271 IscR is essential for yersinia pseudotuberculosis type III secretion and virulence. IscR Yersinia pseudotuberculosis
24936051 Hypoxia-activated cytochrome bd expression in Mycobacterium smegmatis is cAMP receptor protein (CRP)-dependent. CRP Mycobacterium smegmatis
24935161 The effect of specific rhlAlas-box mutations on DNA binding and gene activation by Pseudomonas aeruginosa quorum-sensing transcriptional regulators RhlR and LasR. RhlR, LasR Pseudomonas aeruginosa
24931311 GlnR-mediated regulation of nitrogen metabolism in the actinomycete Saccharopolyspora erythraea. GlnR Saccharopolyspora erythraea
24915802 The oxygen sensor MgFnr controls magnetite biomineralization by regulation of denitrification in Magnetospirillum gryphiswaldense. FNR Magnetospirillum gryphiswaldense
24914178 Transcription of the Lysine-2,3-Aminomutase Gene in the kam Locus of Bacillus thuringiensis subsp. kurstaki HD73 Is Controlled by Both σ54 and σK Factors. RpoN Bacillus thuringiensis
24884510 Construction and verification of the transcriptional regulatory response network of Streptococcus mutans upon treatment with the biofilm inhibitor carolacton. various Streptococcus mutans
24858079 Transcriptional regulation of the Mycobacterium tuberculosis hupB gene expression. HupB, IdeR Mycobacterium tuberculosis
24831014 Cu(I)-mediated allosteric switching in a copper-sensing operon repressor (CsoR). CsoR Geobacillus thermodenitrificans
24818464 [Putative promoter region of type III effector gene avrAC(Xcc8004) in Xanthomonas campestris pv. campestris]. HrpX Xanthomonas campestris pv. campestris
24816490 PdhR, the pyruvate dehydrogenase repressor, does not regulate lipoic acid synthesis. PdhR Escherichia coli
24814025 Involvement of cAMP-CRP in transcription activation and repression of the pck gene encoding PEP carboxykinase, the key enzyme of gluconeogenesis. CRP Escherichia coli
24811061 A high-throughput method to examine protein-nucleotide interactions identifies targets of the bacterial transcriptional regulatory protein fur. Fur Neisseria gonorrhoeae
24801548 Temperature- and nitrogen source-dependent regulation of GlnR target genes in Listeria monocytogenes. GlnR Listeria monocytogenes
24799626 Reciprocal Regulation of Resistance-Nodulation-Division Efflux Systems and the Cpx Two-Component System in Vibrio cholerae. CpxR Vibrio cholerae
24795375 Involvement of the Global Regulator GlxR in 3-Hydroxybenzoate and Gentisate Utilization by Corynebacterium glutamicum. GlxR Corynebacterium glutamicum
24771026 Benzoate Metabolism Intermediate Benzoyl Coenzyme A Affects Gentisate Pathway Regulation in Comamonas testosteroni. GenR Azoarcus evansii
24768321 DptR2, a DeoR-type auto-regulator, is required for daptomycin production in Streptomyces roseosporus. DptR2 Streptomyces roseosporus
24733097 The Type II Secretion Pathway in Vibrio cholerae Is Characterized by Growth Phase-Dependent Expression of Exoprotein Genes and Is Positively Regulated by σE. RpoE Vibrio cholerae
24730374 Role of PdxR in the activation of vitamin B6 biosynthesis in Listeria monocytogenes. PdxR Listeria monocytogenes
24713082 The LexA regulated genes of the Clostridium difficile. LexA Clostridium difficile
24706742 The LacI-Type Transcriptional Regulator AraR Acts as an l-Arabinose-Responsive Repressor of l-Arabinose Utilization Genes in Corynebacterium glutamicum ATCC 31831. AraR Corynebacterium glutamicum
24705323 Transcription of two adjacent carbohydrate utilization gene clusters in Bifidobacterium breve UCC2003 is controlled by LacI- and ROK-type regulators. RafR Bifidobacterium breve UCC2003
24694298 Identified members of the Streptomyces lividans AdpA regulon involved in differentiation and secondary metabolism. AdpA Streptomyces lividans
24675748 Identification of 17 HrpX-regulated proteins including two novel type III effectors, XOC_3956 and XOC_1550, in Xanthomonas oryzae pv. oryzicola. HrpX Xanthomonas oryzae pv. oryzicola
24673833 Regulation of amino sugar utilization in Bacillus subtilis by the GntR family regulators, NagR and GamR. GamR Bacillus subtilis
24673665 The CcpA regulon of Streptococcus suis reveals novel insights into the regulation of the streptococcal central carbon metabolism by binding of CcpA to two distinct binding motifs. CcpA Streptococcus suis
24670089 AmrZ is a global transcriptional regulator implicated in iron uptake and environmental adaption in P. fluorescens F113. AmrZ Pseudomonas fluorescens F113
24659766 The Salmonella Typhi LeuO global regulator forms tetramers: residues involved in oligomerization, DNA binding and transcriptional regulation. LeuO Salmonella typhi
24612375 BrlR from Pseudomonas aeruginosa is a c-di-GMP-responsive transcription factor. BrlR Pseudomonas aeruginosa
24603766 ChIP-Seq and RNA-Seq Reveal an AmrZ-Mediated Mechanism for Cyclic di-GMP Synthesis and Biofilm Development by Pseudomonas aeruginosa. AmrZ Pseudomonas aeruginosa
24577613 Transcriptional regulation mechanism of ter operon by OxyR in Yersinia pestis. OxyR Yersinia pestis
24568651 Functional genomics reveals that Clostridium difficile Spo0A coordinates sporulation, virulence and metabolism. SpoA Clostridium difficile
24568032 Characterization of the gene cluster involved in allantoate catabolism and its transcriptional regulation by the RpiR-type repressor HpxU in Klebsiella pneumoniae. HpxU Klebsiella pneumoniae
24554757 NrrA directly regulates expression of the fraF gene and antisense RNAs for fraE in the heterocyst-forming cyanobacterium Anabaena sp. strain PCC 7120. NrrA Anabaena sp. strain PCC 7120
24535746 Low cell density regulator AphA upregulates the expression of Vibrio vulnificus iscR gene encoding the Fe-S cluster regulator IscR. AphA Vibrio vulnificus
24532769 Differential transcriptional regulation of Aggregatibacter actinomycetemcomitans lsrACDBFG and lsrRK operons by integration host factor protein. IHF Aggregatibacter actinomycetemcomitans
24524855 The CtrA phosphorelay integrates differentiation and communication in the marine alphaproteobacterium Dinoroseobacter shibae. CtrA Dinoroseobacter shibae
24509929 Deciphering the regulon of Streptomyces coelicolor AbrC3, a positive response regulator of antibiotic production. AbrC3 Streptomyces coelicolor
24509921 ExpR coordinates the expression of symbiotically important, bundle-forming Flp pili with quorum sensing in Sinorhizobium meliloti. ExpR Sinorhizobium meliloti
24503250 The FurA regulon in Anabaena sp. PCC 7120: in silico prediction and experimental validation of novel target genes. FurA Anabaena sp. PCC 7120
24497189 BswR controls bacterial motility and biofilm formation in Pseudomonas aeruginosa through modulation of the small RNA rsmZ. BswR Pseudomonas aeruginosa
24490131 Functional characterization of WalRK: A two-component signal transduction system from Bacillus anthracis. WalR Bacillus anthracis
24471758 An unusual repressor controls the expression of a crucial nicotine-degrading gene cluster in Pseudomonas putida S16. NicR2
24466226 The iron-sulphur cluster biosynthesis regulator IscR contributes to iron homeostasis and resistance to oxidants in Pseudomonas aeruginosa. IscR Pseudomonas aeruginosa
24466126 IHF is required for the transcriptional regulation of the Desulfovibrio vulgaris Hildenborough orp operons. IHF Desulfovibrio vulgaris
24465209 Detection of host-derived sphingosine by Pseudomonas aeruginosa is important for survival in the murine lung. SphR Pseudomonas aeruginosa
24465005 A widespread bacteriophage abortive infection system functions through a Type IV toxin-antitoxin mechanism. AbiEi Streptococcus agalactiae (Sag) V/R 2603
24464800 NtcA is responsible for accumulation of the small isoform of ferredoxin:NADP oxidoreductase. NtcA Synechocystis sp. PCC 6803
24464459 Identification and characterization of a second quorum-sensing system in Agrobacterium tumefaciens A6. TraR Agrobacterium tumefaciens A6
24443882 Characterization of AcrD, a resistance-nodulation-cell division-type multidrug efflux pump from the fire blight pathogen Erwinia amylovora. BaeR Erwinia amylovora
24428729 The CarD/CarG regulatory complex is required for the action of several members of the large set of Myxococcus xanthus extracytoplasmic function σ factors. CarD Myxococcus xanthus
24417914 ChIP analysis unravels an exceptionally wide distribution of DNA binding sites for the NtcA transcription factor in a heterocyst-forming cyanobacterium. NtcA Anabaena sp. PCC 7120
24377418 IpsA, a novel LacI-type regulator, is required for inositol-derived lipid formation in Corynebacteria and Mycobacteria. IpsA Corynebacterium glutamicum
24375101 Identification of HilD-regulated genes in Salmonella enterica serovar Typhimurium. HilD Salmonella enterica serovar Typhimurium
24371275 Solution structure and tandem DNA recognition of the C-terminal effector domain of PmrA from Klebsiella pneumoniae. PmrAC Klebsiella pneumoniae
24363348 The LuxR-type regulator VpsT negatively controls the transcription of rpoS, encoding the general stress response regulator, in Vibrio cholerae biofilms. VpsT Vibrio cholerae
24356978 Structural characterization of a ligand-bound form of Bacillus subtilis FadR involved in the regulation of fatty acid degradation. FadR Bacillus subtilis
24354910 Regulation of Salmonella enterica pathogenicity island 1 (SPI-1) by the LysR-type regulator LeuO. LeuO Salmonella enterica serovar Typhimurium
24337581 The nitrogen-regulated response regulator NrrA controls cyanophycin synthesis and glycogen catabolism in the cyanobacterium Synechocystis sp. PCC 6803. NrrA Synechocystis sp. PCC 6803
24336464 Characterization of LgnR, an IclR family transcriptional regulator involved in the regulation of L-gluconate catabolic genes in Paracoccus sp. 43P. LgnR Paracoccus sp. 43P
24322295 FeON-FeOFF: the Helicobacter pylori Fur regulator commutates iron-responsive transcription by discriminative readout of opposed DNA grooves. Fur Helicobacter pylori G27
24296668 Response to metronidazole and oxidative stress is mediated through homeostatic regulator HsrA (HP1043) in Helicobacter pylori. HsrA Helicobacter pylori
24272778 Genome-scale analyses of Escherichia coli and Salmonella enterica AraC reveal noncanonical targets and an expanded core regulon. AraC Escherichia coli, Salmonella enterica
24260461 Transcriptional and proteolytic regulation of the toxin-antitoxin locus vapBC10 (ssr2962/slr1767) on the chromosome of Synechocystis sp. PCC 6803. VapB10 Synechocystis sp. PCC 6803
24244411 Transcriptional activation of the mrkA promoter of the Klebsiella pneumoniae type 3 fimbrial operon by the c-di-GMP-dependent MrkH protein. MrkH Klebsiella pneumoniae
24218564 Phosphorylation-dependent derepression by the response regulator HnoC in the Shewanella oneidensis nitric oxide signaling network. HnoC Shewanella oneidensis
24215877 Plasticity of regulation of mannitol phosphotransferase system operon by CRP-cAMP complex in Vibrio cholerae. CRP Vibrio cholerae
24212724 Antitoxin MqsA represses curli formation through the master biofilm regulator CsgD. MqsA Escherichia coli K-12
24196782 Regulation of the clpP1clpP2 operon by the pleiotropic regulator AdpA in Streptomyces lividans. AdpA Streptomyces lividans
24196194 Transcription factors and genetic circuits orchestrating the complex, multilayered response of Clostridium acetobutylicum to butanol and butyrate stress. various Clostridium acetobutylicum
24195375 [Transcriptional regulation of dps by OxyR protein in Yersinia pestis]. OxyR Yersinia pestis
24187091 Identification of the alternative sigma factor SigX regulon and its implications for Pseudomonas aeruginosa pathogenicity. SigX Pseudomonas aeruginosa
24157832 Deep sequencing analyses expands the Pseudomonas aeruginosa AmpR regulon to include small RNA-mediated regulation of iron acquisition, heat shock and oxidative stress response. AmpR Pseudomonas aeruginosa
24155884 Substitution of glutamate residue by lysine in the dimerization domain affects DNA binding ability of HapR by inducing structural deformity in the DNA binding domain. HapR Vibrio cholerae
24150494 Elucidation of the regulation of ethanol catabolic genes and ptsG using a glxR and adenylate cyclase gene (cyaB) deletion mutants of Corynebacterium glutamicum ATCC 13032. GlxR Corynebacterium glutamicum
24146909 The global anaerobic regulator Anr, is involved in cell attachment and aggregation influencing the first stages of biofilm development in Pseudomonas extremaustralis. Anr Pseudomonas
24146802 A novel branched chain amino acids responsive transcriptional regulator, BCARR, negatively acts on the proteolytic system in Lactobacillus helveticus. BCARR Lactobacillus helveticus
24146625 The bacterial response regulator ArcA uses a diverse binding site architecture to regulate carbon oxidation globally. ArcA Escherichia coli
24142246 ExsA and LcrF Recognize Similar Consensus Binding Sites, but Differences in Their Oligomeric State Influence Interactions with Promoter DNA. ExsA, LcrF Pseudomonas aeruginosa
24136898 OxyR-dependent expression of a novel glutathione S-transferase (Abgst01) gene in Acinetobacter baumannii DS002 and its role in biotransformation of organophosphate insecticides. OxyR Acinetobacter baumannii DS002
24134710 Cyclic di-GMP inhibits Vibrio cholerae motility by repressing induction of transcription and inducing extracellular polysaccharide production. FlrA Vibrio cholerae
24124499 The regulatory role of ferric uptake regulator (Fur) during anaerobic respiration of Shewanella piezotolerans WP3. Fur Shewanella piezotolerans WP3
24123815 Identification of a DNA-damage-inducible regulon in Acinetobacter baumannii. umuDAb Acinetobacter baumannii
24121614 A nopA deletion mutant of Sinorhizobium fredii USDA257, a soybean symbiont, is impaired in nodulation. NopA Sinorhizobium fredii USDA257
24120348 Functional characterization and transcriptional analysis of galE gene encoding a UDP-galactose 4-epimerase in Xanthomonas campestris pv. campestris.
24098496 Leptospira interrogans serovar copenhageni harbors two lexA genes involved in SOS response. LexA Leptospira interrogans
24097951 Identification and characterization of novel Helicobacter pylori apo-fur-regulated target genes. Fur Helicobacter pylori
24097945 Pseudomonas aeruginosa AlgR phosphorylation modulates rhamnolipid production and motility.
24097942 The syp enhancer sequence plays a key role in transcriptional activation by the σ54-dependent response regulator SypG and in biofilm formation and host colonization by Vibrio fischeri. SypG Vibrio fischeri
24086521 The Transcriptional Regulator Np20 Is the Zinc Uptake Regulator in <i>Pseudomonas aeruginosa.</i>
24068239 Functional analysis of TetR-family regulator AmtRsav in Streptomyces avermitilis. AmtRsav Streptomyces avermitilis
24065632 Genes required for aerial growth, cell division, and chromosome segregation are targets of WhiA before sporulation in Streptomyces venezuelae. WhiA Streptomyces venezuelae
24043215 Structural model, physiology and regulation of Slr0006 in Synechocystis PCC 6803. NdhR Synechocystis PCC 6803
24019524 Complex structure of the DNA-binding domain of AdpA, the global transcription factor in Streptomyces griseus, and a target duplex DNA reveals the structural basis of its tolerant DNA sequence specificity. AdpA Streptomyces griseus
24019239 Transcriptional control by two interacting regulatory proteins: identification of the PtxS binding site at PtxR. PtxS, PtxR Pseudomonas aeruginosa
24007446 Use of a promiscuous, constitutively-active bacterial enhancer-binding protein to define the σ⁵⁴ (RpoN) regulon of Salmonella Typhimurium LT2. sigma 54 Salmonella Typhimurium LT2
23995643 CRP regulates pheromone-mediated bioluminescence at multiple levels in Vibrio fischeri ES114. CRP Vibrio Fischeri
23989926 An Lrp-type transcriptional regulator controls expression of the Bacillus subtilis chromate transporter. ChrS Bacillus subtilis
23967193 A novel TetR family transcriptional regulator, SAV576, negatively controls avermectin biosynthesis in Streptomyces avermitilis. SAV576 Streptomyces avermitilis
23941329 Global transcriptional response of Caulobacter crescentus to iron availability. Fur Caulobacter crescentus
23935054 The MerR-like regulator BrlR impairs Pseudomonas aeruginosa biofilm tolerance to colistin by repressing PhoPQ.
23924707 Functional characterization of the NfxB repressor of the mexCD-oprJ multidrug efflux operon of Pseudomonas aeruginosa. NfxB Pseudomonas aeruginosa
23913324 New family of tungstate-responsive transcriptional regulators in sulfate-reducing bacteria. TunR Desulfovibrio vulgaris Hildenborough
23906008 An A-tract at the AtzR binding site assists DNA binding, inducer-dependent repositioning and transcriptional activation of the PatzDEF promoter. AtzR Pseudomonas sp. ADP
23876804 Neisseria prophage repressor implicated in gonococcal pathogenesis. Npr Neisseria gonorrhoeae
23873914 Complex regulation of the phosphoenolpyruvate carboxykinase gene pck and characterization of its GntR-type regulator IolR as a repressor of myo-inositol utilization genes in Corynebacterium glutamicum. IolR Corynebacterium glutamicum
23872555 Characterization of the Burkholderia thailandensis SOS response using whole transcriptome shotgun sequencing. LexA Burkholderia thailandensis
23861975 A new transcriptional repressor of the pseudomonas aeruginosa quorum sensing receptor gene lasR.
23839217 Analysis of activator and repressor functions reveals the requirements for transcriptional control by LuxR, the master regulator of quorum sensing in Vibrio harveyi. LuxR Vibrio harveyi
23831227 SCO4008, a putative TetR transcriptional repressor from Streptomyces coelicolor A3(2), regulates transcription of sco4007 by multidrug recognition. SCO4008 Streptomyces coelicolor A3(2)
23823757 The Expression of the <i>fim</i> Operon Is Crucial for the Survival of <i>Streptococcus parasanguinis</i> FW213 within Macrophages but Not Acid Tolerance. FimR Streptococcus parasanguinis FW213
23823726 The Mycobacterium tuberculosis regulatory network and hypoxia. KstR / DosR Mycobacterium tuberculosis
23818864 Genome-scale analysis of escherichia coli FNR reveals complex features of transcription factor binding. FNR Escherichia coli
23798532 LacR mutations are frequently observed in Streptococcus intermedius and are responsible for increased intermedilysin production and virulence. LacR Streptococcus intermedius
23771781 Functional characterization and application of a tightly regulated MekR/P mekA expression system in Escherichia coli and Pseudomonas putida. MekR Pseudomonas putida
23758731 Members of the Sinorhizobium meliloti ChvI regulon identified by a DNA binding screen. ChvI Sinorhizobium meliloti
23749971 Regulation of the ald gene encoding alanine dehydrogenase by AldR in Mycobacterium smegmatis. AldR Mycobacterium smegmatis
23749119 Identification and characterization of genes regulated by AqsR, a LuxR-type regulator in Acinetobacter oleivorans DR1. AqsR Acinetobacter oleivorans DR1
23743602 Functional analysis of the EspR binding sites upstream of espR in Mycobacterium tuberculosis. 23743602 Mycobacterium tuberculosis
23737758 DNA binding of the cell cycle transcriptional regulator GcrA depends on N6-adenosine methylation in Caulobacter crescentus and other Alphaproteobacteria. GcrA Caulobacter crescentus
23729648 Brucella BioR regulator defines a complex regulatory mechanism for bacterial biotin metabolism. BioR Brucella melitensis
23721164 Transcriptional regulation of fatty acid biosynthesis in mycobacteria. FasR Mycobacterium tuberculosis
23717649 Genome-wide analysis of the salmonella Fis regulon and its regulatory mechanism on pathogenicity islands. Fis Salmonella enterica
23716618 The Fur-Iron Complex Modulates the Expression of the Quorum-Sensing Master Regulator SmcR to Control the Expression of Virulence Factors in Vibrio vulnificus.
23710935 Random and Site-Specific Mutagenesis of the Helicobacter pylori Ferric Uptake Regulator Provides Insight into Fur Structure-Function Relationships.
23708137 Expression of the Rhizobium leguminosarum bv. trifolii pssA gene, involved in exopolysaccharide synthesis, is regulated by RosR, phosphate, and the carbon source. RosR Rhizobium leguminosarum
23701330 The ferric uptake regulator of Helicobacter pylori: a critical player in the battle for iron and colonization of the stomach. FUR
23690578 The lipopolysaccharide modification regulator PmrA limits Salmonella virulence by repressing the type three-secretion system Spi/Ssa. PmrA Salmonella enterica serovar Typhimurium
23687276 The MerR-like regulator BrlR confers biofilm tolerance by activating multidrug efflux pumps in Pseudomonas aeruginosa biofilms. BrlR Pseudomonas aeruginosa
23687265 Temporal Expression Program of Quorum Sensing-Based Transcription Regulation in Sinorhizobium meliloti. ExpR Sinorhizobium meliloti
23686264 An engineered strong promoter for streptomycetes. ScbR Streptomyces coelicolor
23672717 HrpE3 is a type III effector protein required for full virulence of Xanthomonas oryzae pv. oryzicola in rice. HrpE3 Xanthomonas oryzae pv. oryzicola
23647342 Cyclic AMP receptor protein is a repressor of adenylyl cyclase gene cyaA in Yersinia pestis. Crp Yersinia pestis
23646920 RemA is a DNA-binding protein that activates biofilm matrix gene expression in Bacillus subtilis. RemA Bacillus subtilis
23645605 Dissecting the metal selectivity of MerR monovalent metal ion sensors in Salmonella. GolS/CueR
23644595 Studies of IscR reveal a unique mechanism for metal-dependent regulation of DNA binding specificity. IscR Escherichia coli
23642041 Genome wide analysis of the complete GlnR nitrogen-response regulon in Mycobacterium smegmatis. GlnR Mycobacterium smegmatis
23621709 OxyR acts as a transcriptional repressor of hydrogen peroxide-inducible antioxidant genes in Corynebacterium glutamicum R. OxyR Corynebacterium glutamicum
23618855 Structural and genomic DNA analysis of a putative transcription factor SCO5550 from Streptomyces coelicolor A3(2): regulating the expression of gene sco5551 as a transcriptional activator with a novel dimer shape. SCO5550 Streptomyces coelicolor A3(2)
23613830 Transcriptional regulation of a bacteriophage encoded extracellular DNase (Spd-3) by Rgg in Streptococcus pyogenes. Rgg Streptococcus pyogenes
23603676 Repression of antibiotic downregulator WblA by AdpA in Streptomyces coelicolor. AdpA Streptomyces coelicolor
23603352 A thermodynamic model of the cooperative interaction between the archaeal transcription factor Ss-LrpB and its tripartite operator DNA. Ss-LrpB Sulfolobus solfataricus
23586855 Non-canonical protein-DNA interactions identified by ChIP are not artifacts. AraC, sig32 Escherichia coli
23585541 Analysis of novel iron-regulated, surface-anchored hemin-binding proteins in Corynebacterium diphtheriae. DtxR Corynebacterium diphtheriae
23580539 High-resolution mapping of in vivo genomic transcription factor binding sites using in situ DNase I footprinting and ChIP-seq. AbrB Bacillus subtilis strain OC001
23569278 Genome-wide identification of Bacillus subtilis CodY-binding sites at single-nucleotide resolution. CodY Bacillus subtilis
23560801 Regulation of haemolysin (VvhA) production by ferric uptake regulator (Fur) in Vibrio vulnificus: repression of vvhA transcription by Fur and proteolysis of VvhA by Fur-repressive exoproteases.
23555890 Inhibition of SypG-induced biofilms and host colonization by the negative regulator SypE in Vibrio fischeri. SypE Vibrio Fischeri
23551403 The Bacillus subtilis mannose regulator, ManR, a DNA-binding protein regulated by HPr and its cognate PTS transporter ManP. ManR Bacillus subtilis
23543714 Three of four GlnR binding sites are essential for GlnR-mediated activation of transcription of the Amycolatopsis mediterranei nas operon. GlnR Amycolatopsis mediterranei
23510048 Development of a Fur-dependent and tightly regulated expression system in Escherichia coli for toxic protein synthesis.
23481602 Aromatic amino acids required for pili conductivity and long-range extracellular electron transport in Geobacter sulfurreducens.
23475969 SsaA, a member of a novel class of transcriptional regulators, controls sansanmycin production in Streptomyces sp. strain SS through a feedback mechanism. SsaA Streptomyces sp. strain SS
23475968 Mlc is a transcriptional activator with a key role in integrating cyclic AMP receptor protein and integration host factor regulation of leukotoxin RNA synthesis in Aggregatibacter actinomycetemcomitans. Mlc Aggregatibacter actinomycetemcomitans
23475950 Identification and characterization of Rv0494: a fatty acid-responsive protein of the GntR/FadR family from Mycobacterium tuberculosis. FadR Mycobacterium tuberculosis
23469031 Cellobiose-mediated gene expression in Streptococcus pneumoniae: a repressor function of the novel GntR-type regulator BguR. BguR Streptococcus pneumoniae
23457252 Positive feedback regulation of stgR expression for secondary metabolism in Streptomyces coelicolor. StgR Streptomyces coelicolor
23438010 A nonribosomal peptide synthetase mediates siderophore production and virulence in the citrus fungal pathogen Alternaria alternata.
23429531 Mutations to essential orphan response regulator HP1043 of Helicobacter pylori result in growth-stage regulatory defects. HP1043 Helicobacter pylori
23418541 A highly-conserved single-stranded DNA-binding protein in Xanthomonas functions as a harpin-like protein to trigger plant immunity.
23402895 Modulation of QscR, a quorum sensing receptor of Pseudomonas aeruginosa, by truncation of a signal binding domain. QscR Pseudomonas aeruginosa
23396909 Involvement of regulatory interactions among global regulators GlxR, SugR, and RamA in expression of ramA in Corynebacterium glutamicum. GlxR Corynebacterium glutamicum
23387333 Profligate biotin synthesis in α-proteobacteria - a developing or degenerating regulatory system? BioR Agrobacterium tumefaciens
23382903 A non-classical LysR-type transcriptional regulator PA2206 is required for an effective oxidative stress response in Pseudomonas aeruginosa. OxyR Pseudomonas aeruginosa
23382174 A transcriptional regulator linking quorum sensing and chitin induction to render Vibrio cholerae naturally transformable. HapR Vibrio cholerae
23381990 Ferric uptake regulator and its role in the pathogenesis of nontypeable Haemophilus influenzae.
23354754 GenR, an IclR-type regulator, activates and represses the transcription of gen genes involved in 3-hydroxybenzoate and gentisate catabolism in Corynebacterium glutamicum. GenR Corynebacterium glutamicum
23354748 AmrZ modulates Pseudomonas aeruginosa biofilm architecture by directly repressing transcription of the psl operon. AmrZ Pseudomonas aeruginosa
23342123 CcpA-independent glucose regulation of lactate dehydrogenase 1 in Staphylococcus aureus. CcpA Staphylococcus aureus
23340312 RegR virulence regulon of rabbit-specific enteropathogenic Escherichia coli strain E22. RegR Escherichia coli strain E22
23316045 Regulation of internal promoters in a zinc-responsive operon is influenced by transcription from upstream promoters. Zur Anabaena sp. strain PCC 7120
23315731 The iron-dependent regulator fur controls pheromone signaling systems and luminescence in the squid symbiont Vibrio fischeri ES114.
23306672 Role of the Salmonella enterica serovar Typhi Fur regulator and small RNAs RfrA and RfrB in iron homeostasis and interaction with host cells.
23298179 Transcriptional control of the F0F1-ATP synthase operon of Corynebacterium glutamicum: SigmaH factor binds to its promoter and regulates its expression at different pH values. SigH Corynebacterium glutamicum
23297386 ToxR recognizes a direct repeat element in the toxT, ompU, ompT, and ctxA promoters of Vibrio cholerae to regulate transcription. ToxR Vibrio Cholera
23292778 Regulatory twist and synergistic role of metabolic coinducer- and response regulator-mediated CbbR-cbbI interactions in Rhodopseudomonas palustris CGA010. CbbR Rhodopseudomonas palustris CGA010
23292769 Identification of CodY targets in Bacillus anthracis by genome-wide in vitro binding analysis. CodY Bacillus anthracis
23288541 Regulatory control of temporally expressed integration host factor (IHF) in Legionella pneumophila. IHF Legionella pneumophila
23285129 RsmA regulates biofilm formation in Xanthomonas campestris through a regulatory network involving cyclic di-GMP and the Clp transcription factor. RsmA Xanthomonas campestris pv. campestris
23285021 Fur is a repressor of biofilm formation in Yersinia pestis. Fur Yersinia pestis
23275247 Transcriptional regulation of fatty acid biosynthesis in Lactococcus lactis. FabT Lactococcus lactis
23275246 The PaaX-type repressor MeqR2 of Arthrobacter sp. strain Rue61a, involved in the regulation of quinaldine catabolism, binds to its own promoter and to catabolic promoters and specifically responds to anthraniloyl coenzyme A. MeqR2 Arthrobacter sp. strain Rue61a
23264579 Autoregulation of PhoP/PhoQ and positive regulation of the cyclic AMP receptor protein-cyclic AMP complex by PhoP in Yersinia pestis. PhoP Yersinia pestis
23250743 DarR, a TetR-like transcriptional factor, is a cyclic di-AMP-responsive repressor in Mycobacterium smegmatis. DarR Mycobacterium smegmatis
23248009 Competition between the GlnR and PhoP regulators for the glnA and amtB promoters in Streptomyces coelicolor. GlnR Streptomyces coelicolor
23236280 Identification of an Acinetobacter baumannii zinc acquisition system that facilitates resistance to calprotectin-mediated zinc sequestration. Zur Acinetobacter baumannii
23232715 Crp is a global regulator of antibiotic production in streptomyces. CRP Streptomyces coelicolor
23228622 Analysis of a ferric uptake regulator (Fur) knockout mutant in Aeromonas salmonicida subsp. salmonicida.
23223440 Anr, the anaerobic global regulator, modulates the redox state and oxidative stress resistance in Pseudomonas extremaustralis. Anr Pseudomonas
23222129 High-resolution transcriptome and genome-wide dynamics of RNA polymerase and NusA in Mycobacterium tuberculosis. NusA Mycobacterium tuberculosis
23209661 Multiple-level regulation of 2,4-diacetylphloroglucinol production by the sigma regulator PsrA in Pseudomonas fluorescens 2P24. PsrA Pseudomonas fluorescens 2P24
23209028 Functional diversification of ROK-family transcriptional regulators of sugar catabolism in the Thermotogae phylum. ROK-family transcriptional regulators Thermotogae phylum
23204467 SOS response activation and competence development are antagonistic mechanisms in Streptococcus thermophilus. HdiR Streptococcus thermophilus
23204455 Individual and combined roles of the master regulators AphA and LuxR in control of the Vibrio harveyi quorum-sensing regulon. AphA, LuxR Vibrio Harveyi
23190726 Manganese uptake in marine bacteria; the novel MntX transporter is widespread in Roseobacters, Vibrios, Alteromonadales and the SAR11 and SAR116 clades. Mur Ruegeria pomeroyi
23190111 ChIP-seq and transcriptome analysis of the OmpR regulon of Salmonella enterica serovars Typhi and Typhimurium reveals accessory genes implicated in host colonization. OmpR Salmonella enterica
23188510 Antagonistic Rgg regulators mediate quorum sensing via competitive DNA binding in Streptococcus pyogenes. Rgg2, Rgg3 Streptococcus pyogenes
23180123 Effect of the amino acid substitution in the DNA-binding domain of the Fur regulator on production of pyoverdine.
23171087 The response regulator SypE controls biofilm formation and colonization through phosphorylation of the syp-encoded regulator SypA in Vibrio fischeri. SypE Vibrio Fischeri
23163914 Transcriptional control of lipid metabolism by the MarR-like regulator FamR and the global regulator GlxR in the lipophilic axilla isolate Corynebacterium jeikeium K411. FamR & GlxR Corynebacterium jeikeium K411
23152924 Coordination of the arc regulatory system and pheromone-mediated positive feedback in controlling the Vibrio fischeri lux operon. LuxR Vibrio Fischeri
23144251 High-mobility-group a-like CarD binds to a DNA site optimized for affinity and position and to RNA polymerase to regulate a light-inducible promoter in Myxococcus xanthus. CarD Myxococcus xanthus
23144245 Characterization of BreR interaction with the bile response promoters breAB and breR in Vibrio cholerae. BreR Vibrio Cholera
23137357 GsmR, a response regulator with an HD-related output domain in Xanthomonas campestris, is positively controlled by Clp and is involved in the expression of genes responsible for flagellum synthesis. GsmR Xanthomonas campestris pv. campestris
23136852 A LuxR-type repressor of Burkholderia cenocepacia inhibits transcription via antiactivation and is inactivated by its cognate acylhomoserine lactone. CepR2 Burkholderia cenocepacia
23123903 The Bacillus subtilis response regulator gene degU is positively regulated by CcpA and by catabolite-repressed synthesis of ClpC. CcpA Bacillus subtilis
23119071 C. difficile 630Δerm Spo0A regulates sporulation, but does not contribute to toxin production, by direct high-affinity binding to target DNA. Spo0A C. difficile
23116164 The bifunctional role of aconitase in Streptomyces viridochromogenes Tü494. AcnA Streptomyces viridochromogenes Tü494
23109551 Spacing between core recognition motifs determines relative orientation of AraR monomers on bipartite operators. AraR Bacillus subtilis
23109012 Prediction of the pho regulon in Streptomyces clavuligerus DSM 738. PhoP Streptomyces clavuligerus DSM 738
23106203 Identification of two-component system AfsQ1/Q2 regulon and its cross-regulation with GlnR in Streptomyces coelicolor. GlnR Streptomyces coelicolor
23104800 Transcriptional regulation of Aggregatibacter actinomycetemcomitans lsrACDBFG and lsrRK operons and their role in biofilm formation. LsrR Aggregatibacter actinomycetemcomitans
23103979 High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum. GlxR Corynebacterium glutamicum
23090582 Corynebacterium glutamicum CsoR acts as a transcriptional repressor of two copper/zinc-inducible P(1B)-type ATPase operons. CsoR Corynebacterium glutamicum
23088579 A novel transcriptional regulator, Sll1130, negatively regulates heat-responsive genes in Synechocystis sp. PCC6803. Sll1130 Synechocystis sp. PCC6803
23083431 The inter-kingdom solo OryR regulator of Xanthomonas oryzae is important for motility. OryR Xanthomonas oryzae pv. oryzae
23082033 Characterization of the ROK-family transcriptional regulator RokA of Streptococcus pneumoniae D39. RokA Streptococcus pneumoniae
23080248 Cascades and networks of regulatory genes that control antibiotic biosynthesis. GlnR Streptomyces
23075318 Regulation of iron-sulphur cluster homeostasis through transcriptional control of the Isc pathway by [2Fe-2S]-IscR in Escherichia coli. IscR Escherichia coli
23071782 Genome-wide PhoB binding and gene expression profiles reveal the hierarchical gene regulatory network of phosphate starvation in Escherichia coli. PhoB Escherichia coli
23071722 Analysis of the organic hydroperoxide response of Chromobacterium violaceum reveals that OhrR is a cys-based redox sensor regulated by thioredoxin. OhrR Chromobacterium violaceum
23066898 FurA is the master regulator of iron homeostasis and modulates the expression of tetrapyrrole biosynthesis genes in Anabaena sp. PCC 7120.
23065979 ArcA and AppY antagonize IscR repression of hydrogenase-1 expression under anaerobic conditions, revealing a novel mode of O2 regulation of gene expression in Escherichia coli. ArcA, IscR Escherichia coli
23065977 Transcriptional regulation of the CmeABC multidrug efflux pump and the KatA catalase by CosR in Campylobacter jejuni. CosR Campylobacter jejuni
23061624 Corynebacterium glutamicum Zur acts as a zinc-sensing transcriptional repressor of both zinc-inducible and zinc-repressible genes involved in zinc homeostasis. Zur Corynebacterium glutamicum
23057863 Origins of specificity and cross-talk in metal ion sensing by Bacillus subtilis Fur.
23043002 The zinc-responsive regulon of Neisseria meningitidis comprises 17 genes under control of a Zur element. Zur Neisseria meningitidis
23042994 Reexamining transcriptional regulation of the Bacillus subtilis htpX gene and the ykrK gene, encoding a novel type of transcriptional regulator, and redefining the YkrK operator. YkrK Bacillus subtilis
23042989 Transcriptional organization and regulatory elements of a Pseudomonas sp. strain ADP operon encoding a LysR-type regulator and a putative solute transport system. NtrC, IHF, AtzR Pseudomonas sp. strain ADP
23038807 The two-component system ChrSA is crucial for haem tolerance and interferes with HrrSA in haem-dependent gene regulation in Corynebacterium glutamicum. ChrSA Corynebacterium glutamicum
23035866 LuxU connects quorum sensing to biofilm formation in Vibrio fischeri. LuxU Vibrio Fischeri
23029459 Crosstalk of Escherichia coli FadR with global regulators in expression of fatty acid transport genes. FadR Escherichia coli
23028780 Genome-wide prediction and validation of sigma70 promoters in Lactobacillus plantarum WCFS1. sigma-70 Lactobacillus plantarum WCFS1
23024346 Coordinated regulation of gnd, which encodes 6-phosphogluconate dehydrogenase, by the two transcriptional regulators GntR1 and RamA in Corynebacterium glutamicum. GntR1 Corynebacterium glutamicum
23002224 A MarR-Type regulator directly activates transcription from the Brucella abortus virB promoter by sharing a redundant role with HutC. MdrA Brucella abortus
23002221 Fur activates expression of the 2-oxoglutarate oxidoreductase genes (oorDABC) in Helicobacter pylori. Fur Helicobacter pylori
22989714 Global transcriptional control by glucose and carbon regulator CcpA in Clostridium difficile. CcpA Clostridium difficile
22984476 Molecular Characterization of Direct Target Genes and cis-Acting Consensus Recognized by Quorum-Sensing Regulator AphA in Vibrio parahaemolyticus. AphA Vibrio parahaemolyticus
22958383 Novel iron-regulated and Fur-regulated small regulatory RNAs in Aggregatibacter actinomycetemcomitans.
22943411 Transcriptional regulation of the operon encoding stress-responsive ECF sigma factor SigH and its anti-sigma factor RshA, and control of its regulatory network in Corynebacterium glutamicum. SigH Corynebacterium glutamicum
22937060 An effective strategy for a whole-cell biosensor based on putative effector interaction site of the regulatory DmpR protein. DmpR Pseudomonas sp. strain CF600
22923594 Burkholderia xenovorans RcoM(Bx)-1, a transcriptional regulator system for sensing low and persistent levels of carbon monoxide. 22923594 Burkholderia xenovorans
22904090 Genome-wide identification of genes directly regulated by the pleiotropic transcription factor Spx in Bacillus subtilis. Spx Bacillus subtilis
22900619 The effect of zinc limitation on the transcriptome of Pseudomonas protegens Pf-5. Zur Pseudomonas protegens Pf-5
22900538 High- and low-affinity cre boxes for CcpA binding in Bacillus subtilis revealed by genome-wide analysis. CcpA Bacillus subtilis
22885296 Fur-mediated global regulatory circuits in pathogenic Neisseria species.
22880126 Identification of DNA binding motifs of the Mycobacterium tuberculosis PhoP/PhoR two-component signal transduction system. PhoP Mycobacterium tuberculosis
22878084 Cointegrate-resolution of toluene-catabolic transposon Tn4651: determination of crossover site and the segment required for full resolution activity. TnpT Pseudomonas putida mt-2
22870392 AdpA, key regulator for morphological differentiation regulates bacterial chromosome replication. AdpA Streptomyces coelicolor
22869118 Crystallization and preliminary X-ray studies of ferric uptake regulator from Magnetospirillum gryphiswaldense.
22865847 The AbrB2 autorepressor, expressed from an atypical promoter, represses the hydrogenase operon to regulate hydrogen production in Synechocystis strain PCC6803. AbrB2 Synechocystis strain PCC6803
22865058 Synergistic activation of the pathogenicity-related proline iminopeptidase gene in Xanthomonas campestris pv. campestris by HrpX and a LuxR homolog. HrpX, XccR Xanthomonas campestris pv. campestris strain 8004
22844393 Genes for carbon metabolism and the ToxA virulence factor in Pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS. PtxR, PtxS Pseudomonas aeruginosa
22843844 Epoxide-mediated CifR repression of cif gene expression utilizes two binding sites in Pseudomonas aeruginosa. CifR Pseudomonas aeruginosa
22843530 A two-component regulatory system controls autoregulated serpin expression in Bifidobacterium breve UCC2003. SerR Bifidobacterium breve UCC2003
22821977 Characterization of a new GlnR binding box in the promoter of amtB in Streptomyces coelicolor inferred a PhoP/GlnR competitive binding mechanism for transcriptional regulation of amtB. GlnR Streptomyces coelicolor
22821976 Identification and characterization of the functional toxboxes in the Vibrio cholerae cholera toxin promoter. ToxT Vibrio Cholera
22821968 Characterization of the organic hydroperoxide resistance system of Brucella abortus 2308. OhrR Brucella abortus 2308
22821564 Structural and functional analysis of the transcriptional regulator Rv3066 of Mycobacterium tuberculosis. Rv3066 Mycobacterium tuberculosis
22820840 The non-classical ArsR-family repressor PyeR (PA4354) modulates biofilm formation in Pseudomonas aeruginosa. PyeR Pseudomonas aeruginosa
22809273 FxkR provides the missing link in the fixL-fixK signal transduction cascade in Rhizobium etli CFN42. FxkR Rhizobium etli CFN42
22804842 LeuO is a global regulator of gene expression in Salmonella enterica serovar Typhimurium. LeuO Salmonella enterica serovar Typhimurium
22797761 Transcriptional regulation of the ecp operon by EcpR, IHF, and H-NS in attaching and effacing Escherichia coli. EcpR Escherichia coli
22788996 Identification of genes in the VirR regulon of Pectobacterium atrosepticum and characterization of their roles in quorum sensing-dependent virulence. VirR Pectobacterium atrosepticum
22788703 Identification of regulatory regions and regulatory protein complexes of the Spirulina desD gene under temperature stress conditions: role of thioredoxin as an inactivator of a transcriptional repressor GntR under low-temperature stress. GntR Spirulina
22778102 HcpR of Porphyromonas gingivalis is required for growth under nitrosative stress and survival within host cells. HcpR Porphyromonas gingivalis
22761817 Transcriptional activation of pyoluteorin operon mediated by the LysR-type regulator PltR bound at a 22 bp lys box in Pseudomonas aeruginosa M18. PltR Pseudomonas aeruginosa M18
22753056 Transcriptional repression mediated by a TetR family protein, PfmR, from Thermus thermophilus HB8. PfmR Thermus thermophilus
22752906 Regulatory role of cAMP receptor protein over Escherichia coli fumarase genes. CRP Escherichia coli
22730122 Borrelia burgdorferi cp32 BpaB modulates expression of the prophage NucP nuclease and SsbP single-stranded DNA-binding protein. BpaB Borrelia burgdorferi
22723378 Characterization of the RpoN regulon reveals differential regulation of T6SS and new flagellar operons in Vibrio cholerae O37 strain V52. RpoN Vibrio cholerae
2271706 Arc repressor is tetrameric when bound to operator DNA. Arc Escherichia coli bacteriophage P22
22715108 The CopRS two-component system is responsible for resistance to copper in the cyanobacterium Synechocystis sp. PCC 6803. CopR Synechocystis sp. PCC 6803
22708803 Cysteine coordination of Pb(II) is involved in the PbrR-dependent activation of the lead-resistance promoter, PpbrA, from Cupriavidus metallidurans CH34. PbrR Cupriavidus metallidurans CH34
22706057 The TetR-type transcriptional repressor RolR from Corynebacterium glutamicum regulates resorcinol catabolism by binding to a unique operator, rolO. RolR Corynebacterium glutamicum
22696215 Iron and quorum sensing coordinately regulate the expression of vulnibactin biosynthesis in Vibrio vulnificus. SmcR Vibrio vulnificus
22689819 MprA and DosR coregulate a Mycobacterium tuberculosis virulence operon encoding Rv1813c and Rv1812c. MprA, DosR Mycobacterium tuberculosis H37Rv
22685150 Phenylacetic acid catabolism and its transcriptional regulation in Corynebacterium glutamicum. PaaR Corynebacterium glutamicum
22685129 Ketoglutarate transport protein KgtP is secreted through the type III secretion system and contributes to virulence in Xanthomonas oryzae pv. oryzae. HrpX Xanthomonas oryzae pv. oryzae
22684002 Oligomerization and negative autoregulation of the LysR-type transcriptional regulator HsdR from Comamonas testosteroni. HsdR Comamonas testosteroni
22679105 Evidence that the Vibrio vulnificus flagellar regulator FlhF is regulated by a quorum sensing master regulator SmcR. SmcR Vibrio vulnificus
22676800 Differential regulation of antibiotic biosynthesis by DraR-K, a novel two-component system in Streptomyces coelicolor. DraR-K Streptomyces coelicolor
22676653 Mutagenesis of RpoE-like sigma factor genes in Bdellovibrio reveals differential control of groEL and two groES genes. RpoE Bdellovibrio bacteriovorus
22665794 Structure and regulon of Campylobacter jejuni ferric uptake regulator Fur define apo-Fur regulation.
22665491 The second type VI secretion system of Pseudomonas aeruginosa strain PAO1 is regulated by quorum sensing and Fur and modulates internalization in epithelial cells. Fur Pseudomonas aeruginosa
22646062 A Fur-like protein PerR regulates two oxidative stress response related operons dpr and metQIN in Streptococcus suis. PerR Streptococcus suis
22638965 The hdhA gene encodes a haloacid dehalogenase that is regulated by the LysR-type regulator, HdhR, in Sinorhizobium meliloti. HdhR Sinorhizobium meliloti
22636778 cis-Acting elements that control expression of the master virulence regulatory gene atxA in Bacillus anthracis. AbrB Bacillus anthracis
22636768 Growth phase-dependent modulation of Rgg binding specificity in Streptococcus pyogenes. Rgg Streptococcus pyogenes
22635988 A conserved two-component signal transduction system controls the response to phosphate starvation in Bifidobacterium breve UCC2003. PhoP Bifidobacterium breve
22628479 The Bordetella pertussis model of exquisite gene control by the global transcription factor BvgA. BvgA Bordetella pertussis
22624851 The early gene product EUO is a transcriptional repressor that selectively regulates promoters of Chlamydia late genes. EUO Chlamydia
22615248 Fur-regulated iron uptake system of Edwardsiella ictaluri and its influence on pathogenesis and immunogenicity in the catfish host.
22609925 CcpA-dependent carbohydrate catabolite repression regulates galactose metabolism in Streptococcus oligofermentans. CcpA Streptococcus oligofermentans
22609922 Pseudomonas aeruginosa thiol peroxidase protects against hydrogen peroxide toxicity and displays atypical patterns of gene regulation. IscR Pseudomonas aeruginosa PAO1
22609066 AntR-mediated bidirectional activation of antA and antR, anthranilate degradative genes in Pseudomonas aeruginosa. AntR Pseudomonas aeruginosa
22588473 Broadening the signal specificity of prokaryotic promoters by modifying cis-regulatory elements associated with a single transcription factor. BenR Pseudomonas putida KT2440
22581773 The FleQ protein from Pseudomonas aeruginosa functions as both a repressor and an activator to control gene expression from the pel operon promoter in response to c-di-GMP. FleQ Pseudomonas aeruginosa
22580828 A MatP-divisome interaction coordinates chromosome segregation with cell division in E. coli. MatP Escherichia coli
22571587 CodY orchestrates the expression of virulence determinants in emetic Bacillus cereus by impacting key regulatory circuits. CodY Bacillus cereus
22558408 Characterization of a novel ArsR-like regulator encoded by Rv2034 in Mycobacterium tuberculosis. Rv2034 Mycobacterium tuberculosis
22549756 Dissecting the role of DNA sequence in Helicobacter pylori NikR/DNA recognition. NikR Helicobacter pylori
22544272 In vivo and in vitro analyses of regulation of the pheromone-responsive prgQ promoter by the PrgX pheromone receptor protein. PrgX Enterococcus faecalis
22544270 EbfC (YbaB) is a new type of bacterial nucleoid-associated protein and a global regulator of gene expression in the Lyme disease spirochete. EbfC Borrelia burgdorferi
22532809 Long-range chromosome organization in E. coli: a site-specific system isolates the Ter macrodomain. MatP Escherichia coli
22528497 Global analysis of the regulon of the transcriptional repressor LexA, a key component of SOS response in Mycobacterium tuberculosis. LexA Mycobacterium tuberculosis
22522892 Iron regulates expression of Bacillus cereus hemolysin II via global regulator Fur.
22515452 Characterization of FerC, a MarR-type transcriptional regulator, involved in transcriptional regulation of the ferulate catabolic operon in Sphingobium sp. strain SYK-6. FerC Sphingobium sp. strain SYK-6
22511872 The transcription factor AmrZ utilizes multiple DNA binding modes to recognize activator and repressor sequences of Pseudomonas aeruginosa virulence genes. AmrZ Pseudomonas aeruginosa
22510163 The IHF regulon of exponentially growing Pseudomonas putida cells. IHF Pseudomonas putida mt-2
22509901 Neisseria meningitidis and Neisseria gonorrhoeae are differently adapted in the regulation of denitrification: single nucleotide polymorphisms that enable species-specific tuning of the aerobic-anaerobic switch. NarP, Fur Neisseria meningitidis
22507395 Detailed analysis of Helicobacter pylori Fur-regulated promoters reveals a Fur box core sequence and novel Fur-regulated genes. Fur Helicobacter pylori
22506036 Transcriptional regulation of opaR, qrr2-4 and aphA by the master quorum-sensing regulator OpaR in Vibrio parahaemolyticus. OpaR Vibrio parahaemolyticus
22505688 The Pseudomonas aeruginosa global regulator VqsR directly inhibits QscR to control quorum-sensing and virulence gene expression. ExsA Pseudomonas aeruginosa
22504029 Novel members of the phosphate regulon in Escherichia coli O157:H7 identified using a whole-genome shotgun approach. PhoB Escherichia coli O157:H7
22500943 Shedding light on bioluminescence regulation in Vibrio fischeri. Vibrio Fischeri
22486781 Multiple Vibrio fischeri genes are involved in biofilm formation and host colonization. Vibrio Fischeri
22479525 The regulatory repertoire of Pseudomonas aeruginosa AmpC ß-lactamase regulator AmpR includes virulence genes. AmpR Pseudomonas aeruginosa PAO1
22479184 Virulence regulator EspR of Mycobacterium tuberculosis is a nucleoid-associated protein. EspR Mycobacterium tuberculosis H37Rv
22467790 Transcription activation by NtcA in the absence of consensus NtcA-binding sites in an anabaena heterocyst differentiation gene promoter. HetR Anabaena sp. strain PCC 7120
22465186 Overlapping binding of PhoP and AfsR to the promoter region of glnR in Streptomyces coelicolor. AfsR Streptomyces coelicolor
22464736 Mycobacterium tuberculosis WhiB1 represses transcription of the essential chaperonin GroEL2. WhiB1 Mycobacterium tuberculosis
22462578 Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100. HutR Corynebacterium resistens DSM 45100
22451651 Response to copper stress in Streptomyces lividans extends beyond genes under direct control of a copper-sensitive operon repressor protein (CsoR). CsoR Streptomyces lividans
22449632 Genome-wide distribution of AdpA, a global regulator for secondary metabolism and morphological differentiation in Streptomyces, revealed the extent and complexity of the AdpA regulatory network. AdpA Streptomyces griseus
22447906 Organizational requirements of the SaeR binding sites for a functional P1 promoter of the sae operon in Staphylococcus aureus. SaeR Staphylococcus aureus
22447902 CcrR, a TetR family transcriptional regulator, activates the transcription of a gene of the Ethylmalonyl coenzyme A pathway in Methylobacterium extorquens AM1. CcrR Methylobacterium extorquens AM1
22438866 Characterization of OxyR as a negative transcriptional regulator that represses catalase production in Corynebacterium diphtheriae. OxyR Corynebacterium glutamicum
22435712 The promoter architectural landscape of the Salmonella PhoP regulon. PhoP Salmonella enterica serovar Typhimurium
22408167 Orientation of Pseudomonas aeruginosa ExsA monomers bound to promoter DNA and base-specific contacts with the P(exoT) promoter. ExsA Pseudomonas aeruginosa
22408166 Lactate utilization is regulated by the FadR-type regulator LldR in Pseudomonas aeruginosa. LldR Pseudomonas aeruginosa
22408165 The distal ExsA-binding site in Pseudomonas aeruginosa type III secretion system promoters is the primary determinant for promoter-specific properties. ExsA Pseudomonas aeruginosa
22403700 ArgR of Streptomyces coelicolor is a versatile regulator. ArgR Streptomyces coelicolor
22394314 The orphan histidine protein kinase SgmT is a c-di-GMP receptor and regulates composition of the extracellular matrix together with the orphan DNA binding response regulator DigR in Myxococcus xanthus. DigR Myxococcus xanthus
22389488 Characterization of the response to zinc deficiency in the cyanobacterium Anabaena sp. strain PCC 7120. Zur Anabaena sp. strain PCC 7120
22373915 Neisseria conserved protein DMP19 is a DNA mimic protein that prevents DNA binding to a hypothetical nitrogen-response transcription factor. NHTF Neisseria meningitides MC58
22371373 LitR of Vibrio salmonicida is a salinity-sensitive quorum-sensing regulator of phenotypes involved in host interactions and virulence. LitR Vibrio Salmonicida
22366416 GntR-type transcriptional regulator PckR negatively regulates the expression of phosphoenolpyruvate carboxykinase in Corynebacterium glutamicum. PckR Corynebacterium glutamicum
22361942 Expression of Vibrio vulnificus insulin-degrading enzyme is regulated by the cAMP-CRP complex. CRP Vibrio Vulnificus
22355671 DNA recognition and transcriptional regulation by the WhiA sporulation factor. WhiA Streptomyces coelicolor
22328668 Anaerobic p-coumarate degradation by Rhodopseudomonas palustris and identification of CouR, a MarR repressor protein that binds p-coumaroyl coenzyme A. CouR Rhodopseudomonas palustris
22313288 Regulation of the isophthalate catabolic operon controlled by IphR in Comamonas sp. strain E6. IphR Comamonas sp. strain E6
22307757 The TonB3 system in the human pathogen Vibrio vulnificus is under the control of the global regulators Lrp and cyclic AMP receptor protein. Lrp, CRP Vibrio Vulnificus
22307756 Genome-wide definition of the SigF regulon in Mycobacterium tuberculosis. SigF Mycobacterium tuberculosis
22305460 Analysis of the SOS response of Vibrio and other bacteria with multiple chromosomes. LexA Vibrio parahaemolyticus
22301911 A novel GlnR target gene, nnaR, is involved in nitrate/nitrite assimilation in Streptomyces coelicolor. NnaR Streptomyces coelicolor
22301909 NdnR is an NAD-responsive transcriptional repressor of the ndnR operon involved in NAD de novo biosynthesis in Corynebacterium glutamicum. NdnR Corynebacterium glutamicum
22297218 Identification of the fur-binding site in regulatory region of the vulnibactin-receptor gene in Vibrio vulnificus. Fur Vibrio Vulnificus
22291906 Structure-function studies of DNA binding domain of response regulator KdpE reveals equal affinity interactions at DNA half-sites. KdpE E. coli
2228957 LexA-independent expression of a mutant mucAB operon. LexA E. coli
22287525 The ChrA response regulator in Corynebacterium diphtheriae controls hemin-regulated gene expression through binding to the hmuO and hrtAB promoter regions. ChrA Corynebacterium diphtheriae
22287521 Fur-mediated activation of gene transcription in the human pathogen Neisseria gonorrhoeae. Fur Neisseria gonorrhoeae
22275523 Global regulation of gene expression by OxyR in an important human opportunistic pathogen. OxyR Pseudomonas aeruginosa
22274608 The quorum sensing transcriptional regulator TraR has separate binding sites for DNA and the anti-activator. TraR Rhizobium sp. NGR234
22272299 The mycobacterial LysR-type regulator OxyS responds to oxidative stress and negatively regulates expression of the catalase-peroxidase gene. OxyS Mycobacterium tuberculosis
22262098 The Pseudomonas aeruginosa rmlBDAC operon, encoding dTDP-L-rhamnose biosynthetic enzymes, is regulated by the quorum-sensing transcriptional regulator RhlR and the alternative sigma factor σS. RpoS Pseudomonas aeruginosa
22261175 Regulation of the malic enzyme gene malE by the transcriptional regulator MalR in Corynebacterium glutamicum. MalR Corynebacterium glutamicum
22250984 CsrA modulates luxR transcript levels in Vibrio fischeri. CsrA Vibrio Fischeri
22247506 Further unraveling the regulatory twist by elucidating metabolic coinducer-mediated CbbR-cbbI promoter interactions in Rhodopseudomonas palustris CGA010. CbbR Rhodopseudomonas palustris CGA010
22233679 The novel sigma factor-like regulator RpoQ controls luminescence, chitinase activity, and motility in Vibrio fischeri. RpoQ Vibrio Fischeri
22228735 Regulation of bacteriocin production and cell death by the VicRK signaling system in Streptococcus mutans. VicR Streptococcus mutans
22210762 Oligomerization of the response regulator ComE from Streptococcus mutans is affected by phosphorylation. ComE Streptococcus mutans
22203788 The fur transcription regulator and fur-regulated genes in Clostridium botulinum A ATCC 3502. Fur Clostridium botulinum A ATCC 3502
22194461 Ribulokinase and transcriptional regulation of arabinose metabolism in Clostridium acetobutylicum. AraR Clostridium acetobutylicum
22194453 Interaction of the histone-like nucleoid structuring protein and the general stress response regulator RpoS at Vibrio cholerae promoters that regulate motility and hemagglutinin/protease expression. H-NS Vibrio cholerae
22183144 Thermodynamic and molecular analysis of the AbrB-binding sites within the phyC-region of Bacillus amyloliquefaciens FZB45. AbrB Bacillus amyloliquefaciens FZB45
22180530 Genomic analysis of DNA binding and gene regulation by homologous nucleoid-associated proteins IHF and HU in Escherichia coli K12. IHF / HU Escherichia coli
22178965 The transcription factor AlsR binds and regulates the promoter of the alsSD operon responsible for acetoin formation in Bacillus subtilis. AlsR Bacillus subtilis
22178235 Negative transcriptional control of biotin metabolism genes by the TetR-type regulator BioQ in biotin-auxotrophic Corynebacterium glutamicum ATCC 13032. BioQ Corynebacterium glutamicum
22168595 More than just a metabolic regulator--elucidation and validation of new targets of PdhR in Escherichia coli. PdhR Escherichia coli
22156435 Functional characterization of Crp/Fnr-type global transcriptional regulators in Desulfovibrio vulgaris Hildenborough. FNR/CRP Desulfovibrio vulgaris
22156416 Identification and characterization of the LysR-type transcriptional regulator HsdR for steroid-inducible expression of the 3α-hydroxysteroid dehydrogenase/carbonyl reductase gene in Comamonas testosteroni. HsdR Comamonas testosteroni
22149171 Transcriptional regulation of sdiA by cAMP-receptor protein, LeuO, and environmental signals in Salmonella enterica serovar Typhimurium. CRP, LeuO? Salmonella typhimurium 14028
22123696 Binding of the RamR repressor to wild-type and mutated promoters of the RamA gene involved in efflux-mediated multidrug resistance in Salmonella enterica serovar Typhimurium. RamA Salmonella enterica serovar Typhimurium
22113916 Functional characterization of the quorum sensing regulator RsaL in the plant-beneficial strain Pseudomonas putida WCS358. RsaL Pseudomonas putida WCS358
22101848 Mur regulates the gene encoding the manganese transporter MntH in Brucella abortus 2308. Mur Brucella abortus
22093184 Formation of repressor-inducer-operator ternary complex: negative cooperativity of d-camphor binding to CamR.
22082910 Deciphering the transcriptional regulatory logic of amino acid metabolism. ArgR, Lrp and TrpR Escherichia coli
22081399 In the NadR regulon, adhesins and diverse meningococcal functions are regulated in response to signals in human saliva. NadR Neisseria meningitidis
22081386 Involvement of the global Crp regulator in cyclic AMP-dependent utilization of aromatic amino acids by Pseudomonas putida. Crp Pseudomonas putida
22056938 Novel roles of SoxR, a transcriptional regulator from Xanthomonas campestris, in sensing redox-cycling drugs and regulating a protective gene that have overall implications for bacterial stress physiology and virulence on a host plant. SoxR Xanthomonas campestris pv. campestris
22051194 DNA binding is essential for PprI function in response to radiation damage in Deinococcus radiodurans. PprI Deinococcus radiodurans
22039538 CcpA ensures optimal metabolic fitness of Streptococcus pneumoniae. ccpA Streptococcus pneumoniae
22039053 Determination of target sequence bound by PapX, repressor of bacterial motility, in flhD promoter using systematic evolution of ligands by exponential enrichment (SELEX) and high throughput sequencing. PapX E. coli CFT073
22020641 Homodimerization and binding of specific domains to the target DNA are essential requirements for HlyU to regulate expression of the virulence gene rtxA1, encoding the repeat-in-toxin protein in the human pathogen Vibrio vulnificus. HlyU Vibrio vulnificus
22020638 Roles of DNA sequence and sigma A factor in transcription of the vraSR operon. VraR Staphylococcus aureus
22017966 The Fur regulon in anaerobically grown Salmonella enterica sv. Typhimurium: identification of new Fur targets. Fur Salmonella enterica
22011959 The Streptococcus mutans GlnR protein exhibits an increased affinity for the glnRA operon promoter when bound to GlnK. GlnR Streptococcus mutans
22002465 Transcriptional analysis and functional characterization of XCC1294 gene encoding a GGDEF domain protein in Xanthomonas campestris pv. campestris. Clp Xanthomonas campestris pv. campestris
22001925 Inverted repeats in the promoter as an autoregulatory sequence for TcrX in Mycobacterium tuberculosis. TcrX Mycobacterium tuberculosis
21995721 Regulation of phenylacetic acid uptake is σ54 dependent in Pseudomonas putida CA-3. RpoN Pseudomonas putida
21992506 The N-acetyl-D-glucosamine repressor NagC of Vibrio fischeri facilitates colonization of Euprymna scolopes. NagC Vibrio fischeri
21989394 CcpA represses the expression of the divergent cit operons of Enterococcus faecalis through multiple cre sites. CcpA Enterococcus faecalis
21987378 Identification of HrpX regulon genes in Xanthomonas oryzae pv. oryzicola using a GFP visualization technique. HrpX Xanthomonas oryzae pv. oryzicola
21984792 Fine-tuning control of phoBR expression in Vibrio cholerae by binding of phoB to multiple pho boxes. PhoB Vibrio cholerae
21984784 KdgR, an IClR family transcriptional regulator, inhibits virulence mainly by repression of hrp genes in Xanthomonas oryzae pv. oryzae. KdgR Xanthomonas oryzae pv. oryzae
21976733 A TetR-like regulator broadly affects the expressions of diverse genes in Mycobacterium smegmatis. Ms6564 Mycobacterium smegmatis
21966533 Molecular characterization of transcriptional regulation of rovA by PhoP and RovA in Yersinia pestis. PhoP Yersinia pestis
21965571 Positive regulation of the Vibrio cholerae porin OmpT by iron and fur. Fur Vibrio Cholera
21965566 Regulation of transcription by SMU.1349, a TetR family regulator, in Streptococcus mutans. SMU.1349 Streptococcus mutans
21964733 PrcR, a PucR-type transcriptional activator, is essential for proline utilization and mediates proline-responsive expression of the proline utilization operon putBCP in Bacillus subtilis. PrcR Bacillus subtilis
21958188 Functional analysis of the integration host factor site of the σ(54) Pu promoter of Pseudomonas putida by in vivo UV imprinting. IHF Pseudomonas putida
21956110 Cooperative regulation of the Vibrio vulnificus nan gene cluster by NanR protein, cAMP receptor protein, and N-acetylmannosamine 6-phosphate. NanR Vibrio vulnificus
21936662 Genome-wide identification of genes regulated by the Rcs phosphorelay system in Erwinia amylovora. RcsB Erwinia amylovora
21933687 Molecular characterization of PrpR, the transcriptional activator of propionate catabolism in Corynebacterium glutamicum. PrpR Corynebacterium glutamicum
21926235 Integration of cyclic di-GMP and quorum sensing in the control of vpsT and aphA in Vibrio cholerae. VpsR and HapR Vibrio cholerae
21926227 CodY-mediated regulation of guanosine uptake in Bacillus subtilis. CodY Bacillus subtilis
21926170 NrrA, a nitrogen-regulated response regulator protein, controls glycogen catabolism in the nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120. NrrA Anabaena sp. strain PCC 7120
21914970 Identification of LexA regulated promoters in Escherichia coli O157:H7. LexA Escherichia coli O157:H7
21908673 Transcriptional profiling analysis of the global regulator NorG, a GntR-like protein of Staphylococcus aureus. NorG Staphylococcus aureus
21908670 Regulation of perR expression by iron and PerR in Campylobacter jejuni. PerR campylobacter jejuni
21908665 MdoR is a novel positive transcriptional regulator for the oxidation of methanol in Mycobacterium sp. strain JC1. MdoR Mycobacterium sp. strain JC1
21906221 PecS is an important player in the regulatory network governing the coordinated expression of virulence genes during the interaction between Dickeya dadantii 3937 and plants. PecS Dickeya dadantii
21905121 Solution NMR structure of VF0530 from Vibrio fischeri reveals a nucleic acid-binding function. Vibrio Fischeri
21890699 Phage-borne factors and host LexA regulate the lytic switch in phage GIL01. LexA Bacillus thuringiensis temperate phage GIL01
21883801 The haem-uptake gene cluster in Vibrio fischeri is regulated by Fur and contributes to symbiotic colonization. Vibrio Fischeri
21883529 Novel roles of LeuO in transcription regulation of E. coli genome: antagonistic interplay with the universal silencer H-NS. LeuO Escherichia coli
21883526 Atypical DNA recognition mechanism used by the EspR virulence regulator of Mycobacterium tuberculosis. EspR Mycobacterium tuberculosis
21873409 Bacillus subtilis Fur represses one of two paralogous haem-degrading monooxygenases. Fur Bacillus subtilis
2186599 Control of the lux regulon of Vibrio fischeri. LexA / LuxR Vibrio fischeri
21859854 Ehrlichia chaffeensis TRP120 binds a G+C-rich motif in host cell DNA and exhibits eukaryotic transcriptional activator function. TRP120 Ehrlichia chaffeensis
21854462 Inactivation of a novel response regulator is necessary for biofilm formation and host colonization by Vibrio fischeri. Vibrio Fischeri
21849503 Control of proteobacterial central carbon metabolism by the HexR transcriptional regulator: a case study in Shewanella oneidensis. HexR Shewanella oneidensis
21843309 The Caulobacter crescentus chromosome replication origin evolved two classes of weak DnaA binding sites. DnaA Caulobacter crescentus
21840980 An extracytoplasmic function sigma factor-mediated cell surface signaling system in Pseudomonas syringae pv. tomato DC3000 regulates gene expression in response to heterologous siderophores. PSPTO_1203 Pseudomonas syringae pv. tomato DC3000
21840971 CbpA acts as a modulator of HspR repressor DNA binding activity in Helicobacter pylori. HspR Helicobacter pylori
21840319 Indirect repression by Bacillus subtilis CodY via displacement of the activator of the proline utilization operon. CodY Bacillus subtilis
21831138 Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors. HrpL Erwinia amylovora
21821763 Identification of a transcriptional repressor involved in benzoate metabolism in Geobacter bemidjiensis. BgeR Geobacter bemidjiensis
21819457 Lactobacillus brevis responds to flavonoids through KaeR, a LysR-type of transcriptional regulator. KaeR Lactobacillus brevis
21818612 Modulation of inv gene expression by the OmpR two-component response regulator protein of Yersinia enterocolitica. OmpR
21812885 The Staphylococcus aureus CsoR regulates both chromosomal and plasmid-encoded copper resistance mechanisms. CsoR Staphylococcus aureus
21811584 Regulation of oxidative stress response by CosR, an essential response regulator in Campylobacter jejuni. CosR Campylobacter jejuni
21810205 Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus. NagR S. oneidensis MR-1
2180912 Control of Escherichia coli superoxide dismutase (sodA and sodB) genes by the ferric uptake regulation (fur) locus.
21804010 Rsp inhibits attachment and biofilm formation by repressing fnbA in Staphylococcus aureus MW2. Rsp Staphylococcus aureus
21800623 [Purification of recombinant H-NS protein of Yersinia pestis and characterization of its DNA-binding activity]. H-NS Yersinia pestis
21799779 The two-component signal transduction system CopRS of Corynebacterium glutamicum is required for adaptation to copper-excess stress. CopR Corynebacterium glutamicum
21795602 EspR, a key regulator of Mycobacterium tuberculosis virulence, adopts a unique dimeric structure among helix-turn-helix proteins. EspR Mycobacterium tuberculosis
21784947 Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000. Fur Pseudomonas syringae
21784930 The RpiR-like repressor IolR regulates inositol catabolism in Sinorhizobium meliloti. IolR Sinorhizobium meliloti
21779167 A genome-wide approach to discovery of small RNAs involved in regulation of virulence in Vibrio cholerae. ToxT Vibrio cholerae
21778209 Regulation of the integrase and cassette promoters of the class 1 integron by nucleoid-associated proteins. LexA, IHF, H-NS Escherichia coli
21778207 CelR-mediated activation of the cellobiose-utilization gene cluster in Streptococcus pneumoniae. CelR Streptococcus pneumoniae
21771781 ClpR protein-like regulator specifically recognizes RecA protein-independent promoter motif and broadly regulates expression of DNA damage-inducible genes in mycobacteria. ClpR-like regulator Mycobacterium tuberculosis
21771341 SabR enhances nikkomycin production via regulating the transcriptional level of sanG, a pathway-specific regulatory gene in Streptomyces ansochromogenes. SabR Streptomyces ansochromogenes
21771112 The Vibrio cholerae fatty acid regulatory protein, FadR, represses transcription of plsB, the gene encoding the first enzyme of membrane phospholipid biosynthesis. FadR Vibrio cholerae
21765893 Investigation of the Staphylococcus aureus GraSR regulon reveals novel links to virulence, stress response and cell wall signal transduction pathways. GraR Staphylococcus aureus
21764942 Identification of Rgg binding sites in the Streptococcus pyogenes chromosome. Rgg Streptococcus pyogenes
21764937 HlyU is a positive regulator of hemolysin expression in Vibrio anguillarum. HlyU Vibrio anguillarum
21750152 Mapping the regulon of Vibrio cholerae ferric uptake regulator expands its known network of gene regulation. Fur Vibrio cholerae
2174861 Transcriptional regulation by iron of a Vibrio cholerae virulence gene and homology of the gene to the Escherichia coli fur system.
21725002 Phenylacetyl coenzyme A is an effector molecule of the TetR family transcriptional repressor PaaR from Thermus thermophilus HB8. PaaR Thermus thermophilus HB8
21719541 Transcriptional regulation of Pseudomonas aeruginosa rhlR: role of the CRP orthologue Vfr (virulence factor regulator) and quorum-sensing regulators LasR and RhlR. Vfr Pseudomonas aeruginosa
21708124 A new target for an old regulator: H-NS represses transcription of bolA morphogene by direct binding to both promoters. H-NS E. Coli
21705595 Counteractive balancing of transcriptome expression involving CodY and CovRS in Streptococcus pyogenes. CodY Streptococcus pyogenes
21700663 The LysR-type PcaQ protein regulates expression of a protocatechuate-inducible ABC-type transport system in Sinorhizobium meliloti. PcaQ Sinorhizobium meliloti
21699902 Roadblock repression of transcription by Bacillus subtilis CodY. CodY Bacillus subtilis
21696462 Characterization of DNA-binding sequences for CcaR in the cephamycin-clavulanic acid supercluster of Streptomyces clavuligerus. CcaR Streptomyces clavuligerus
21696458 Bacitracin and nisin resistance in Staphylococcus aureus: a novel pathway involving the BraS/BraR two-component system (SA2417/SA2418) and both the BraD/BraE and VraD/VraE ABC transporters. BraR Staphylococcus aureus
21692876 Regulation of fructooligosaccharide metabolism in an extra-intestinal pathogenic Escherichia coli strain. FosR Escherichia coli
21685367 A DNA damage checkpoint in Caulobacter crescentus inhibits cell division through a direct interaction with FtsW. LexA Caulobacter crescentus
21683740 Lrp of Corynebacterium glutamicum controls expression of the brnFE operon encoding the export system for L-methionine and branched-chain amino acids. Lrp Corynebacterium glutamicum
21673794 Novel roles of cAMP receptor protein (CRP) in regulation of transport and metabolism of carbon sources. CRP Escherichia coli
21665967 Genome-wide identification of in vivo binding sites of GlxR, a cyclic AMP receptor protein-type regulator in Corynebacterium glutamicum. GlxR Corynebacterium glutamicum
21653552 Comprehensive insights into Mycobacterium tuberculosis DevR (DosR) regulon activation switch. DevR(DosR) Mycobacterium tuberculosis
21645132 Niche-specific contribution to streptococcal virulence of a MalR-regulated carbohydrate binding protein. MalR Streptococcus pyogenes
21642463 Novel insights into the regulation of LexA in the cyanobacterium Synechocystis sp. Strain PCC 6803. LexA ynechocystis sp. Strain PCC 6803
21629592 Bacterium in a box: sensing of quorum and environment by the LuxI/LuxR gene regulatory circuit. Vibrio Fischeri
21624143 SO2426 is a positive regulator of siderophore expression in Shewanella oneidensis MR-1. SO2426 Shewanella oneidensis MR-1
21622752 Comparative genomic analysis of the hexuronate metabolism genes and their regulation in gammaproteobacteria. UxuR, ExuR Escherichia coli
21622734 Quorum sensing in Chromobacterium violaceum: DNA recognition and gene regulation by the CviR receptor. CviR Chromobacterium violaceum
21618467 Selective detection of gold using genetically engineered bacterial reporters. GolS E. coli
21615202 Systematic mutagenesis of all predicted gntR genes in Xanthomonas campestris pv. campestris reveals a GntR family transcriptional regulator controlling hypersensitive response and virulence. HpaR1 Xanthomonas campestris pv. campestris
21603707 Transcriptional response of Streptococcus pneumoniae to Zn2+) limitation and the repressor/activator function of AdcR. AdcR Streptococcus pneumoniae
21602348 Regulon of the N-acetylglucosamine utilization regulator NagR in Bacillus subtilis. YvoA Bacillus subtilis
21602344 Comparative genomics of the dormancy regulons in mycobacteria. DosR mycobacteria
21571883 Environmental influences on competitive hydrogen peroxide production in Streptococcus gordonii. CcpA Streptococcus gordonii
21569462 Resistance to organic hydroperoxides requires ohr and ohrR genes in Sinorhizobium meliloti. OhrR Sinorhizobium meliloti
21565928 Characterization of the KstR-dependent promoter of the gene for the first step of the cholesterol degradative pathway in Mycobacterium smegmatis. KstR Mycobacterium smegmatis
21559975 Purification and characterization of an arginine regulatory protein, ArgR, in Corynebacterium glutamicum. ArgR Corynebacterium glutamicum
21546589 FvbA is required for vibriobactin utilization in Pseudomonas aeruginosa. Fur P. aeruginosa
21542860 The two faces of ToxR: activator of ompU, co-regulator of toxT in Vibrio cholerae. ToxR Vibrio cholerae
21536048 Different requirements for σ Region 4 in BvgA activation of the Bordetella pertussis promoters P(fim3) and P(fhaB). BvgA Bordetella pertussis
21529368 Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons. LexA Escherichia coli
21518251 K182G substitution in DevR or C₈G mutation in the Dev box impairs protein-DNA interaction and abrogates DevR-mediated gene induction in Mycobacterium tuberculosis. DevR Mycobacterium tuberculosis
21483448 XerR, a negative regulator of XccR in Xanthomonas campestris pv. campestris, relieves its repressor function in planta.
21478360 Promoter recognition and activation by the global response regulator CbrB in Pseudomonas aeruginosa. CbrB Pseudomonas aeruginosa
21463507 Genome-wide analysis of the role of GlnR in Streptomyces venezuelae provides new insights into global nitrogen regulation in actinomycetes. GlnR Streptomyces venezuelae
21460081 The L-Arabinan utilization system of Geobacillus stearothermophilus. AraR Geobacillus stearothermophilus T-6
21459907 Binary toxin locus analysis in Clostridium difficile. clostridium difficile
21454367 Roles of RpoS and PsrA in cyst formation and alkylresorcinol synthesis in Azotobacter vinelandii. PsrA Azotobacter vinelandii
21450808 RinA controls phage-mediated packaging and transfer of virulence genes in Gram-positive bacteria. RinA Staphylococcus aureus
21450087 Fnr (EtrA) acts as a fine-tuning regulator of anaerobic metabolism in Shewanella oneidensis MR-1. EtrA Shewanella oneidensis
21441516 Properties of CsnR, the transcriptional repressor of the chitosanase gene, csnA, of Streptomyces lividans. RevR Clostridium perfringens
21441502 Combinatorial regulation by MrpC2 and FruA involves three sites in the fmgE promoter region during Myxococcus xanthus development. MrpC2 and FruA Myxococcus xanthus
21421764 Role of the biofilm master regulator CsgD in cross-regulation between biofilm formation and flagellar synthesis. CsgD Escherichia coli
21415497 Genetic components of stringent response in Vibrio cholerae. Vibrio cholerae
21415495 The complexity of ToxT-dependent transcription in Vibrio cholerae. ToxT Vibrio cholerae
21398530 Regulation of cytotoxicity by quorum-sensing signaling in Vibrio vulnificus is mediated by SmcR, a repressor of hlyU.
21393642 Helicobacter pylori NikR protein exhibits distinct conformations when bound to different promoters. NikR Helicobacter pylori
21378195 Complex transcriptional control of the antibiotic regulator afsS in Streptomyces: PhoP and AfsR are overlapping, competitive activators. PhoP Streptomyces coelicolor
21378182 Activity of the Rhodopseudomonas palustris p-coumaroyl-homoserine lactone-responsive transcription factor RpaR. RpaR Rhodopseudomonas palustris
21362064 Unravelling the regulatory twist--regulation of CO2 fixation in Rhodopseudomonas palustris CGA010 mediated by atypical response regulator(s). CbbR Rhodopseudomonas palustris
21349973 TetR-family transcriptional repressor Thermus thermophilus FadR controls fatty acid degradation. FadR Thermus thermophilus
21345179 Regulatory effects of cAMP receptor protein (CRP) on porin genes and its own gene in Yersinia pestis. CRP Yersinia pestis
21345178 Phenotypic and transcriptional analysis of the osmotic regulator OmpR in Yersinia pestis. OmpR Yersinia pestis
21342532 Investigation of the human pathogen Acinetobacter baumannii under iron limiting conditions. Fur Acinetobacter baumannii
21339296 Control of copper resistance and inorganic sulfur metabolism by paralogous regulators in Staphylococcus aureus. CstR Staphylococcus aureus
21338611 The design involved in PapI and Lrp regulation of the pap operon. Lrp Escherichia coli
21338516 Role of a Fur homolog in iron metabolism in Nitrosomonas europaea. Fur Nitrosomonas europaea
21335458 Elucidation of the regulon and cis-acting regulatory element of HrpB, the AraC-type regulator of a plant pathogen-like type III secretion system in Burkholderia pseudomallei. HrpB Burkholderia pseudomallei DD503
21325136 AphA and LuxR/HapR reciprocally control quorum sensing in vibrios. AphA and LuxR/HapR Vibrio harveyi and Vibrio cholerae.
21320555 Control of adhA and sucR expression by the SucR regulator in Corynebacterium glutamicum. SucR Corynebacterium glutamicum
21317335 Regulation of sulfur assimilation pathways in Burkholderia cenocepacia through control of genes by the SsuR transcription factor. SsuR Burkholderia cenocepacia
21317326 Lactococcus lactis ZitR is a zinc-responsive repressor active in the presence of low, nontoxic zinc concentrations in vivo. ZitR Lactococcus lactis
21317265 Contribution of rapid evolution of the luxR-luxI intergenic region to the diverse bioluminescence outputs of Vibrio fischeri strains isolated from different environments. LuxR Vibrio fischeri
21314918 Repression of btuB gene transcription in Escherichia coli by the GadX protein. GadX Escherichia coli
21299645 CcpA-mediated repression of Clostridium difficile toxin gene expression. CcpA Clostridium difficile
21278290 Autogenous transcriptional regulation of the regA gene, encoding an AraC-Like, essential virulence regulator in Citrobacter rodentium. RegA C. rodentium
21277915 Sigma factors and promoters in Corynebacterium glutamicum. sigma factors Corynebacterium glutamicum
21276098 Complex binding of the FabR repressor of bacterial unsaturated fatty acid biosynthesis to its cognate promoters. FabR Escherichia coli
21262549 Genetic characterization of the CcpA-dependent, cellobiose-specific PTS system comprising CelB, PtcB and PtcA that transports lactose in Lactococcus lactis IL1403. CcpA Lactococcus lactis
21257775 Combinatorial regulation of fmgD by MrpC2 and FruA during Myxococcus xanthus development. FruA Myxococcus xanthus
21257771 Enterococcus faecalis virulence regulator FsrA binding to target promoters. FsrA Enterococcus faecalis
21257767 Regulation of catalase-peroxidase KatG is OxyR dependent and Fur independent in Caulobacter crescentus. OxyR Caulobacter crescentus
21255113 Role of a Zn-independent DksA in Zn homeostasis and stringent response.
21255107 Saturation mutagenesis of a CepR binding site as a means to identify new quorum-regulated promoters in Burkholderia cenocepacia. CepR Burkholderia cenocepacia
21239586 The Escherichia coli K-12 MntR miniregulon includes dps, which encodes the major stationary-phase DNA-binding protein. MntR Escherichia coli
21239488 Fructose 1-phosphate is the preferred effector of the metabolic regulator Cra of Pseudomonas putida. Cra Pseudomonas putida
21237626 XCC2731, a GGDEF domain protein in Xanthomonas campestris, is involved in bacterial attachment and is positively regulated by Clp. Clp Xanthomonas campestris pv. campestris
21217150 Mode of DNA binding by SopA protein of Escherichia coli F plasmid. SopA Escherichia coli F plasmid
21217007 Control of heme homeostasis in Corynebacterium glutamicum by the two-component system HrrSA. HrrSA Corynebacterium glutamicum
21216998 In vivo recognition of the fecA3 target promoter by Helicobacter pylori NikR. NikR Helicobacter pylori
21216994 The tib adherence locus of enterotoxigenic Escherichia coli is regulated by cyclic AMP receptor protein. CRP Escherichia coli
21203399 Physiological roles of ArcA, Crp, and EtrA and their interactive control on aerobic and anaerobic respiration in Shewanella oneidensis. ArcA, Crp, EtrA Shewanella oneidensis
21199674 The NO-responsive hemoglobins of Campylobacter jejuni: concerted responses of two globins to NO and evidence in vitro for globin regulation by the transcription factor NssR. NssR Campylobacter jejuni
21195716 Genetic evidence for a novel interaction between transcriptional activator SoxS and region 4 of the σ(70) subunit of RNA polymerase at class II SoxS-dependent promoters in Escherichia coli. SoxS Escherichia coli
21187288 Molecular control of polyene macrolide biosynthesis: direct binding of the regulator PimM to eight promoters of pimaricin genes and identification of binding boxes. PimM Streptomyces natalensis
21187145 Transcriptional analysis of pmeA gene encoding a pectin methylesterase in Xanthomonas campestris pv. campestris. Clp Xanthomonas campestris pv. campestris
21183673 Target genes, consensus binding site, and role of phosphorylation for the response regulator MtrA of Corynebacterium glutamicum. MtrA Corynebacterium glutamicum
21169497 Pseudomonas aeruginosa enhances production of an antimicrobial in response to N-acetylglucosamine and peptidoglycan. NagR Pseudomonas aeruginosa
21169492 H-NS binding and repression of the ctx promoter in Vibrio cholerae. H-NS Vibrio Cholera
21169483 Unexpected coregulator range for the global regulator Lrp of Escherichia coli and Proteus mirabilis. Lrp Escherichia coli / Proteus mirabilis
21166899 A novel copper-responsive regulon in Mycobacterium tuberculosis. RicR Mycobacterium tuberculosis
21166894 Regulation of the phototrophic iron oxidation (pio) genes in Rhodopseudomonas palustris TIE-1 is mediated by the global regulator, FixK. FixK Rhodopseudomonas palustris
21153861 Bacterial gold sensing and resistance. CueR, GolS, REVIEW Salmonella enterica and Cupriavidus metallidurans
21143316 Identification of a novel bacteriocin regulatory system in Streptococcus mutans. BrsR Streptococcus mutans
21132364 Ferric iron uptake genes are differentially expressed in the presence of copper sulfides in Acidithiobacillus ferrooxidans strain LR. Fur Acidithiobacillus ferrooxidans
21124877 Activation of the SMU.1882 transcription by CovR in Streptococcus mutans. CovR Streptococcus mutans
21115700 Interaction of transcriptional repressor ArgR with transcriptional regulator FarR at the argB promoter region in Corynebacterium glutamicum. ArgR Corynebacterium glutamicum
21115656 Novel members of the Cra regulon involved in carbon metabolism in Escherichia coli. Cra Escherichia coli
21113127 Molecular mechanism by which the nucleoid occlusion factor, SlmA, keeps cytokinesis in check. SlmA Escherichia coli
21109563 Roles of flavonoids and the transcriptional regulator TtsI in the activation of the type III secretion system of Bradyrhizobium elkanii SEMIA587. TtsI Bradyrhizobium elkanii SEMIA587
21097628 Promoter discrimination at class I MarA regulon promoters mediated by glutamic acid 89 of the MarA transcriptional activator of Escherichia coli. MarA Escherichia coli
21097623 Contributions of multiple binding sites and effector-independent binding to CodY-mediated regulation in Bacillus subtilis. CodY Bacillus subtilis
21087492 From an electrophoretic mobility shift assay to isolated transcription factors: a fast genomic-proteomic approach. Xpp1 Hypocrea jecorina
21085634 The transcriptional regulator Rok binds A+T-rich DNA and is involved in repression of a mobile genetic element in Bacillus subtilis. Rok Bacillus subtilis
21084057 Identification of McbR as transcription regulator of aecD and genes involved in methionine and cysteine biosynthesis in Corynebacterium jeikeium K411. McbR Corynebacterium jeikeium K411
21078819 Crystal structure of TtgV in complex with its DNA operator reveals a general model for cooperative DNA binding of tetrameric gene regulators. TtgV Pseudomonas aeruginosa
2107533 The roles of indoleglycerol phosphate and the TrpI protein in the expression of trpBA from Pseudomonas aeruginosa. TrpI Pseudomonas aeruginosa
21057008 The atypical OmpR/PhoB response regulator ChxR from Chlamydia trachomatis forms homodimers in vivo and binds a direct repeat of nucleotide sequences. ChxR Chlamydia trachomatis
21042031 Oxygen-sensitive global regulator, Anr, is involved in the biosynthesis of poly(3-hydroxybutyrate) in Pseudomonas extremaustralis. Anr Pseudomonas
20979333 Genes essential for morphological development and antibiotic production in Streptomyces coelicolor are targets of BldD during vegetative growth. BldD Streptomyces coelicolor
20971899 Insights into the extracytoplasmic stress response of Xanthomonas campestris pv. campestris: role and regulation of {sigma}E-dependent activity. RpoE Xanthomonas campestris pv. campestris
20965974 Common and divergent features in transcriptional control of the homologous small RNAs GlmY and GlmZ in Enterobacteriaceae. GlrR Yersinia pseudotuberculosis
20947575 ArgR is an essential local transcriptional regulator of the arcABC operon in Streptococcus suis and is crucial for biological fitness in an acidic environment. ArgR Streptococcus suis
20935095 Regulation of CodY activity through modulation of intracellular branched-chain amino acid pools. CodY Bacillus subtilis SMY
20923423 The TetR-type transcriptional regulator FasR of Corynebacterium glutamicum controls genes of lipid synthesis during growth on acetate. FasR Corynebacterium glutamicum
20920248 Computational analysis of LexA regulons in Cyanobacteria. LexA various
20874755 Regulatory role of MlrA in transcription activation of csgD, the master regulator of biofilm formation in Escherichia coli. MlrA Escherichia coli
20869215 Choline catabolism, σ⁵⁴ factor and NtrC are required for the full expression of the Pseudomonas aeruginosa phosphorylcholine phosphatase gene. NtrC Pseudomonas aeruginosa
20864477 Regulation of the nitrate reductase operon narKGHJI by the cAMP-dependent regulator GlxR in Corynebacterium glutamicum. GlxR Corynebacterium glutamicum
20854853 Adaptation of AmtR-controlled gene expression by modulation of AmtR binding activity in Corynebacterium glutamicum. AmtR Corynebacterium glutamicum
20851905 The methanogen-specific transcription factor MsvR regulates the fpaA-rlp-rub oxidative stress operon adjacent to msvR in Methanothermobacter thermautotrophicus. MsvR Methanothermobacter thermautotrophicus
20851105 Identification and characterization of a transcriptional regulator, SucR, that influences sucCD transcription in Corynebacterium glutamicum. SucR Corynebacterium glutamicum
20843371 The characterization of conserved binding motifs and potential target genes for M. tuberculosis MtrAB reveals a link between the two-component system and the drug resistance of M. smegmatis. MtrA Mycobacterium tuberculosis
20830609 OmpR controls Yersinia enterocolitica motility by positive regulation of flhDC expression. OmpR Yersinia enterocolitica
20817675 Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation. AbrB / Abh Bacillus subtilis
20807206 Target transcription binding sites differentiate two groups of MerR-monovalent metal ion sensors. CueR Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
20805330 Characterization of the CpxRA regulon in Haemophilus ducreyi. CpxR Haemophilus ducreyi
20799976 Global gene expression under nitrogen starvation in Xylella fastidiosa: contribution of the σ54 regulon. RpoN Xylella fastidiosa
20735780 Regulation of glutamate dehydrogenase expression in Pseudomonas putida results from its direct repression by NtrC under nitrogen-limiting conditions. NtrC Pseudomonas putida
20727012 Transcriptional regulation of the mexEF-oprN multidrug efflux pump operon by MexT and an unidentified repressor in nfxC-type mutant of Pseudomonas aeruginosa. MexT Pseudomonas aeruginosa
20709902 AmrZ beta-sheet residues are essential for DNA binding and transcriptional control of Pseudomonas aeruginosa virulence genes. AmrZ Pseudomonas aeruginosa
20709897 Integration of metabolism and virulence by Clostridium difficile CodY. CodY Clostridium difficile
20709896 CztR, a LysR-type transcriptional regulator involved in zinc homeostasis and oxidative stress defense in Caulobacter crescentus. CztR Caulobacter crescentus
20708667 Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens. PilR Geobacter sulfurreducens
20705504 Fur is required for the activation of virulence gene expression through the induction of the sae regulatory system in Staphylococcus aureus. Fur Staphylococcus aureus
20679441 Identification of the TcpP-binding site in the toxT promoter of Vibrio cholerae and the role of ToxR in TcpP-mediated activation. TcpP Vibrio cholerae
20662783 A single qrr gene is necessary and sufficient for LuxO-mediated regulation in Vibrio fischeri. Vibrio Fischeri
20662776 Novel architectural features of Bordetella pertussis fimbrial subunit promoters and their activation by the global virulence regulator BvgA. BvgA Bordetella pertussis
20661434 Reconstruction of the core and extended regulons of global transcription factors. FNR Rhodobacter sphaeroides
20661307 Defining the plasticity of transcription factor binding sites by Deconstructing DNA consensus sequences: the PhoP-binding sites among gamma/enterobacteria. PhoP E. coli & S. typhimurium
20660485 Novel regulatory cascades controlling expression of nitrogen-fixation genes in Geobacter sulfurreducens. GnfM Geobacter sulfurreducens
20659289 H-NS-mediated repression of CRISPR-based immunity in Escherichia coli K12 can be relieved by the transcription activator LeuO. LeuO Escherichia coli
20656871 Transcriptional regulation of the terephthalate catabolism operon in Comamonas sp. strain E6. TphR Comamonas sp. strain E6
20639331 Regulation of ciaXRH operon expression and identification of the CiaR regulon in Streptococcus mutans. CiaR Streptococcus mutans
20639328 The paralogous MarR/DUF24-family repressors YodB and CatR control expression of the catechol dioxygenase CatE in Bacillus subtilis. YodB,CatR Bacillus subtilis
20639324 The ABC transporter HrtAB confers resistance to hemin toxicity and is regulated in a hemin-dependent manner by the ChrAS two-component system in Corynebacterium diphtheriae. ChrA Corynebacterium diphtheriae
20638427 The pstSCAB operon for phosphate uptake is regulated by the global regulator GlxR in Corynebacterium glutamicum. GlxR Corynebacterium glutamicum
20624907 Role of catabolite control protein A in the regulation of intermedilysin production by Streptococcus intermedius. CcpA Streptococcus intermedius
20622065 Overlapping repressor binding sites result in additive regulation of Escherichia coli FadH by FadR and ArcA. FadR, ArcA Escherichia coli
20606066 The BceABRS four-component system regulates the bacitracin-induced cell envelope stress response in Streptococcus mutans. BceR Streptococcus mutans
20594941 Identification of a TRAP transporter for malonate transport and its expression regulated by GtrA from Sinorhizobium meliloti. GtrA Sinorhizobium meliloti
20593029 Ribonucleotide reductases of Salmonella typhimurium: transcriptional regulation and differential role in pathogenesis. Fur Salmonella typhimurium LT2
20581202 Compartmentalized glucose metabolism in Pseudomonas putida is controlled by the PtxS repressor. PtxS Pseudomonas putida
20573962 Transcriptional control of the Bradyrhizobium japonicum irr gene requires repression by fur and Antirepression by Irr. Irr Bradyrhizobium japonicum
20562308 The LysR-type virulence activator AphB regulates the expression of genes in Vibrio cholerae in response to low pH and anaerobiosis. AphB Vibrio cholerae
20558281 Two non-consensus Clp binding sites are involved in upregulation of the gum operon involved in xanthan polysaccharide synthesis in Xanthomonas campestris pv. campestris. Clp Xanthomonas campestris pv. campestris
20545866 Unphosphorylated CsgD controls biofilm formation in Salmonella enterica serovar Typhimurium. CsgD Salmonella enterica serovar Typhimurium
20522496 Mutation of the gene encoding a major outer-membrane protein in Xanthomonas campestris pv. campestris causes pleiotropic effects, including loss of pathogenicity.
20521955 Pseudomonas syringae two-component response regulator RhpR regulates promoters carrying an inverted repeat element. RhpR Pseudomonas syringae
20511509 Role of multiple HLR1 sequences in the regulation of the dual promoters of the psaAB genes in Synechocystis sp. PCC 6803. RpaB Synechocystis sp. PCC 6803
20497331 Regulation of CovR expression in Group B Streptococcus impacts blood-brain barrier penetration. CovR Streptococcus agalacticae A909
20494996 The Pseudomonas aeruginosa Vfr regulator controls global virulence factor expression through cyclic AMP-dependent and -independent mechanisms. Vfr Pseudomonas aeruginosa
20493253 Repression of aerobic leukotoxin transcription by integration host factor in Aggregatibacter actinomycetemcomitans. IHF Aggregatibacter actinomycetemcomitans
20487270 The alternative oxidase (AOX) gene in Vibrio fischeri is controlled by NsrR and upregulated in response to nitric oxide. NsrR Vibrio Fischeri
20487029 AtuR is a repressor of acyclic terpene utilization (Atu) gene cluster expression and specifically binds to two 13 bp inverted repeat sequences of the atuA-atuR intergenic region. AtuR Pseudomonas aeruginosa
20472788 Transcriptional analysis of the grlRA virulence operon from Citrobacter rodentium. GrlA/GrlR E. Coli
20453121 NtcA from Microcystis aeruginosa PCC 7806 is autoregulatory and binds to the microcystin promoter. NtcA Microcystis aeruginosa PCC 7806
20453093 ExsA recruits RNA polymerase to an extended -10 promoter by contacting region 4.2 of sigma-70. ExsA Pseudomonas aeruginosa
20447998 Morphological differentiation and clavulanic acid formation are affected in a Streptomyces clavuligerus adpA-deleted mutant. Brp Streptomyces clavuligerus ATCC 27064
20437149 Experimental and computational characterization of the ferric uptake regulator from Aliivibrio salmonicida (Vibrio salmonicida). Fur Vibrio salmonicida
20435732 Subcellular localization and characterization of the ParAB system from Corynebacterium glutamicum. ParB Corynebacterium glutamicum
20435721 Regulatory system of the protocatechuate 4,5-cleavage pathway genes essential for lignin downstream catabolism. LigR Sphingobium sp. strain SYK-6
20421606 IscR regulates RNase LS activity by repressing rnlA transcription. IscR Escherichia coli
20418399 Three paralogous LysR-type transcriptional regulators control sulfur amino acid supply in Streptococcus mutans. CysR Streptococcus mutans
20405108 CalA, a cyAbrB protein, binds to the upstream region of ftsZ and is down-regulated in heterocysts in Anabaena sp. PCC 7120. CalA Anabaena sp. PCC 7120
20400542 Identification of the quorum-sensing target DNA sequence and N-Acyl homoserine lactone responsiveness of the Brucella abortus virB promoter. VjbR Brucella abortus
20395270 Structural and functional characterization of the transcriptional repressor CsoR from Thermus thermophilus HB8. CsoR Thermus thermophilus
20389118 ChpR is a chlorpyrifos-responsive transcription regulator in Sinorhizobium meliloti. ChpR Sinorhizobium meliloti
20363936 Direct targets of CodY in Staphylococcus aureus. CodY Staphylococcus aureus
20348267 Expanded role for the nitrogen assimilation control protein in the response of Klebsiella pneumoniae to nitrogen stress. NAC Klebsiella pneumoniae
20348251 Growth phase-dependent activation of the DccRS regulon of Campylobacter jejuni. DccR Campylobacter jejuni
20347390 The RssB/RssA two-component system regulates biosynthesis of the tripyrrole antibiotic, prodigiosin, in Serratia marcescens. CalA Anabaena sp. PCC 7120
20304990 Characterization of the Pseudomonas aeruginosa transcriptional response to phenylalanine and tyrosine. PhhR Pseudomonas aeruginosa str. PA14
20300643 Identification of the regulatory logic controlling Salmonella pathoadaptation by the SsrA-SsrB two-component system. SsrB Salmonella enterica
20233934 Quorum-sensing regulation of a copper toxicity system in Pseudomonas aeruginosa. LasR Pseudomonas aeruginosa
20199600 Complex interplay between the LysR-type regulator AtzR and its binding site mediates atzDEF activation in response to two distinct signals. AtzR Pseudomonas sp. ADP
20178568 Characterization of mleR, a positive regulator of malolactic fermentation and part of the acid tolerance response in Streptococcus mutans. MleR Streptococcus mutans
20173059 Role of GlnR in acid-mediated repression of genes encoding proteins involved in glutamine and glutamate metabolism in Streptococcus mutans. GlnR Streptococcus mutans
20172998 In the Staphylococcus aureus two-component system sae, the response regulator SaeR binds to a direct repeat sequence and DNA binding requires phosphorylation by the sensor kinase SaeS. SaeR Staphylococcus aureus
20167624 Cholesterol utilization in mycobacteria is controlled by two TetR-type transcriptional regulators: kstR and kstR2. KstR2 Mycobacterium tuberculosis
2015825 The binding of the ferric uptake regulation protein to a DNA fragment.
20156994 A novel nucleoid protein of Escherichia coli induced under anaerobiotic growth conditions. Dan Escherichia coli
20141531 Targets for the MalI repressor at the divergent Escherichia coli K-12 malX-malI promoters. MalI Escherichia coli K-12
20140235 Fis is essential for capsule production in Pasteurella multocida and regulates expression of other important virulence factors. FIS Pasteurella multocida
20139188 Analyses of the regulatory mechanism and physiological roles of Pseudomonas aeruginosa OhrR, a transcription regulator and a sensor of organic hydroperoxides. OhrR Pseudomonas aeruginosa
20110369 Direct interaction between quorum-sensing regulator SmcR and RNA polymerase is mediated by integration host factor to activate vvpE encoding elastase in Vibrio vulnificus. SmcR None
20091741 Inhibitors of the Pseudomonas aeruginosa quorum-sensing regulator, QscR. QscR Pseudomonas aeruginosa
20089044 The sigma-factor FliA, ppGpp and DksA coordinate transcriptional control of the aer2 gene of Pseudomonas putida. FliA Pseudomonas putida
20081038 PcaO positively regulates pcaHG of the beta-ketoadipate pathway in Corynebacterium glutamicum. PcaO Corynebacterium glutamicum
20081036 Identification and regulation of the N-acetylglucosamine utilization pathway of the plant pathogenic bacterium Xanthomonas campestris pv. campestris. NagR Xanthomonas campestris pv. campestris ATCC 33913
20073482 Transcriptional regulation and molecular characterization of the manA gene encoding the biofilm dispersing enzyme mannan endo-1,4-beta-mannosidase in Xanthomonas campestris.
20070368 Differential expression of genes of Xylella fastidiosa in xylem fluid of citrus and grapevine.
20061475 The cyclic-di-GMP phosphodiesterase BinA negatively regulates cellulose-containing biofilms in Vibrio fischeri. BinA Vibrio Fischeri
20056699 The transcriptional regulators RamA and RamB are involved in the regulation of glycogen synthesis in Corynebacterium glutamicum. RamA Corynebacterium glutamicum
20055984 The Zur regulon of Corynebacterium glutamicum ATCC 13032. Zur Corynebacterium glutamicum
20053280 Virulence regulator AphB enhances toxR transcription in Vibrio cholerae. AphB Vibrio cholerae
20048056 GacA-controlled activation of promoters for small RNA genes in Pseudomonas fluorescens. GacA Pseudomonas fluorescens
20047910 The ferrichrome uptake pathway in Pseudomonas aeruginosa involves an iron release mechanism with acylation of the siderophore and recycling of the modified desferrichrome.
20038591 The Streptococcus mutans IrvR repressor is a CI-like regulator that functions through autocleavage and Clp-dependent proteolysis. IrvR Streptococcus mutans
20028978 Mycobacterium tuberculosis cAMP receptor protein (Rv3676) differs from the Escherichia coli paradigm in its cAMP binding and DNA binding properties and transcription activation properties. CRP Mycobacterium tuberculosis
20025616 Redox-mediated interactions of VHb (Vitreoscilla haemoglobin) with OxyR: novel regulation of VHb biosynthesis under oxidative stress. OxyR Vitreoscilla
20023111 CalA, a cyanobacterial AbrB protein, interacts with the upstream region of hypC and acts as a repressor of its transcription in the cyanobacterium Nostoc sp. strain PCC 7120. CalA Nostoc sp. Strain PCC 7120
20015147 Induction of the ferritin gene (ftnA) of Escherichia coli by Fe(2+)-Fur is mediated by reversal of H-NS silencing and is RyhB independent. Fur Escherichia coli
20012992 The pathway-specific regulator AveR from Streptomyces avermitilis positively regulates avermectin production while it negatively affects oligomycin biosynthesis. AveR Streptomyces avermitilis
20004667 The cAMP receptor-like protein CLP is a novel c-di-GMP receptor linking cell-cell signaling to virulence gene expression in Xanthomonas campestris.
2 Delineation of the intimate details of the backbone conformation of pyridine nucleotide coenzymes in aqueous solution.
19939938 Genome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional repressor in Geobacter species. HgtR Geobacter sulfurreducens
19933826 The virulence transcriptional activator AphA enhances biofilm formation by Vibrio cholerae by activating expression of the biofilm regulator VpsT. AphA Vibrio cholerae
19933365 The major catalase gene (katA) of Pseudomonas aeruginosa PA14 is under both positive and negative control of the global transactivator OxyR in response to hydrogen peroxide. OxyR Pseudomonas aeruginosa
19933364 Characterization of the CtsR stress response regulon in Lactobacillus plantarum. CtsR Lactobacillus plantarum
19933349 Transcriptomic response of Listeria monocytogenes to iron limitation and Fur mutation. Fur Listeria monocytogenes
19915027 The zinc-responsive regulator Zur controls expression of the coelibactin gene cluster in Streptomyces coelicolor. Zur Streptomyces coelicolor
19915021 Genome-wide characterization of the SloR metalloregulome in Streptococcus mutans. SloR Streptococcus mutans
19897756 Requirement of the Lactobacillus casei MaeKR two-component system for L-malic acid utilization via a malic enzyme pathway. MaeR Lactobacillus casei
19894125 Characterization of NikR-responsive promoters of urease and metal transport genes of Helicobacter mustelae. NikR Helicobacter mustelae
19892760 The SOS response of Listeria monocytogenes is involved in stress resistance and mutagenesis. LexA Listeria monocytogenes
19889097 Novel Sinorhizobium meliloti quorum sensing positive and negative regulatory feedback mechanisms respond to phosphate availability. ExpR Sinorhizobium meliloti
19854911 Metabolic control of virulence genes in Brucella abortus: HutC coordinates virB expression and the histidine utilization pathway by direct binding to both promoters. HutC Brucella abortus
19854902 Transcriptional and functional analysis of the Neisseria gonorrhoeae Fur regulon. Fur Neisseria gonorrhoeae
19854834 Transcriptional regulation of membrane lipid homeostasis in Escherichia coli. FabR Escherichia coli
19850617 Regulation of the dauBAR operon and characterization of D-amino acid dehydrogenase DauA in arginine and lysine catabolism of Pseudomonas aeruginosa PAO1. ArgR, DauR Pseudomonas aeruginosa
19846594 Transcriptome profiling defines a novel regulon modulated by the LysR-type transcriptional regulator MexT in Pseudomonas aeruginosa. MexT Pseudomonas aeruginosa
19841076 CcpA and LacD.1 affect temporal regulation of Streptococcus pyogenes virulence genes. CcpA Streptococcus pyogenes
19832907 Pseudomonas aeruginosa PA14 cupD transcription is activated by the RcsB response regulator, but repressed by its putative cognate sensor RcsC. RcsC Pseudomonas aeruginosa PA14
19825982 The Crc global regulator binds to an unpaired A-rich motif at the Pseudomonas putida alkS mRNA coding sequence and inhibits translation initiation. Crc Pseudomonas putida
19810809 Identification of six type III effector genes with the PIP box in Xanthomonas campestris pv. campestris and five of them contribute individually to full pathogenicity. HrpX Xathomonas campestris
19801409 CbpA: a polarly localized novel cyclic AMP-binding protein in Pseudomonas aeruginosa. Vfr Pseudomonas aeruginosa
19781550 PhhR binds to target sequences at different distances with respect to RNA polymerase in order to activate transcription. PhhR Pseudomonas putida
19767422 Role of the transcriptional regulator RamB (Rv0465c) in the control of the glyoxylate cycle in Mycobacterium tuberculosis. RamB Mycobacterium tuberculosis
19749054 Identification of direct transcriptional target genes of ExoS/ChvI two-component signaling in Sinorhizobium meliloti. ChvI Sinorhizobium meliloti
19747491 RelB and RelE of Escherichia coli form a tight complex that represses transcription via the ribbon-helix-helix motif in RelB. RelB Escherichia coli
19732150 Search for additional targets of the transcriptional regulator CcpN from Bacillus subtilis. CcpN Bacillus subtilis
19717597 The PqrR transcriptional repressor of Pseudomonas aeruginosa transduces redox signals via an iron-containing prosthetic group. PqrR Pseudomonas aeruginosa
19703315 Direct and negative regulation of the sycO-ypkA-ypoJ operon by cyclic AMP receptor protein (CRP) in Yersinia pestis. CRP Yersinia pestis
19688381 The effect of ArgR-DNA binding affinity on ornithine production in Corynebacterium glutamicum. ArgR Corynebacterium glutamicum
19684132 A new member of the Escherichia coli fad regulon: transcriptional regulation of fadM (ybaW). FadR Escherichia coli
19682264 Global position analysis of the Pseudomonas aeruginosa quorum-sensing transcription factor LasR. LasR Pseudomonas aeruginosa
19679654 Escherichia coli unsaturated fatty acid synthesis: complex transcription of the fabA gene and in vivo identification of the essential reaction catalyzed by FabB. FabB Escherichia coli
19665500 The GlxR regulon of the amino acid producer Corynebacterium glutamicum: Detection of the corynebacterial core regulon and integration into the transcriptional regulatory network model. GlxR Corynebacterium glutamicum
19656291 NsrR targets in the Escherichia coli genome: new insights into DNA sequence requirements for binding and a role for NsrR in the regulation of motility. NsrR Escherichia coli
19651859 The global regulator CodY regulates toxin gene expression in Bacillus anthracis and is required for full virulence. CodY Bacillus anthracis
19648251 Powerful induction of divergent tgs1-Rv3131 genes in Mycobacterium tuberculosis is mediated by DevR interaction with a high-affinity site and an adjacent cryptic low-affinity site. DevR Mycobacterium tuberculosis
19648245 Contributions of Zur-controlled ribosomal proteins to growth under zinc starvation conditions. Zur Bacillus subtilis
19648241 The role of PerR in O2-affected gene expression of Clostridium acetobutylicum. PerR Clostridium acetobutylicum
19648236 NtrC-dependent regulatory network for nitrogen assimilation in Pseudomonas putida. NtrC Pseudomonas putida KT2440
19647061 Histone-like nucleoid-structuring protein represses transcription of the ehx operon carried by locus of enterocyte effacement-negative Shiga toxin-expressing Escherichia coli. H-NS Escherichia coli
19646180 Identification of the transcription factor responsible for L-malate-dependent regulation in the marine Antarctic bacterium Pseudoalteromonas haloplanktis TAC125. MalR Pseudoalteromonas haloplanktis TAC125
19643764 Positive regulation of flhDC expression by OmpR in Yersinia pseudotuberculosis. OmpR
19636340 LsrR-binding site recognition and regulatory characteristics in Escherichia coli AI-2 quorum sensing. LsrR Escherichia coli
19633076 Downregulation of the Escherichia coli guaB promoter by upstream-bound cyclic AMP receptor protein. CRP Escherichia coli
19624843 Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens. RpoN Geobacter sulfurreducens
19601664 Clp and RpfF up-regulate transcription of pelA1 gene encoding the major pectate lyase in Xanthomonas campestris pv. campestris. Clp Xanthomonas campestris pv. campestris
19589837 Role of MexZ and PA5471 in transcriptional regulation of mexXY in Pseudomonas aeruginosa. MexZ Pseudomonas aeruginosa
19586415 Iron differentially regulates gene expression and extracellular secretion of Vibrio vulnificus cytolysin-hemolysin. Fur Vibrio vulnificus
19583988 Transcriptional control of the succinate dehydrogenase operon sdhCAB of Corynebacterium glutamicum by the cAMP-dependent regulator GlxR and the LuxR-type regulator RamA. GlxR Corynebacterium glutamicum
19581368 An A257V mutation in the bacillus subtilis response regulator Spo0A prevents regulated expression of promoters with low-consensus binding sites. Spo0A Bacillus
19570137 Activation and repression of a sigmaN-dependent promoter naturally lacking upstream activation sequences. AtzR Pseudomonas sp. ADP
19557345 Molecular analysis of the copper-responsive CopRSCD of a pathogenic Pseudomonas fluorescens strain. CopR Pseudomonas fluorescens
19552825 Characterization of Zur-dependent genes and direct Zur targets in Yersinia pestis. Zur Yersinia pestis
19542281 SlyA, a MarR family transcriptional regulator, is essential for virulence in Dickeya dadantii 3937. SlyA Dickeya dadantii
19542274 CodY activates transcription of a small RNA in Bacillus subtilis. CodY Bacillus subtilis
19542007 Illumination stimulates cAMP receptor protein-dependent transcriptional activation from regulatory regions containing class I and class II promoter elements in Synechocystis sp. PCC 6803. CRP Synechocystis sp. PCC 6803
19520766 Fur controls iron homeostasis and oxidative stress defense in the oligotrophic alpha-proteobacterium Caulobacter crescentus. Fur Caulobacter crescentus
19508282 The long-chain fatty acid sensor, PsrA, modulates the expression of rpoS and the type III secretion exsCEBA operon in Pseudomonas aeruginosa. PsrA Pseudomonas aeruginosa
19506074 Regulation of glucose metabolism in Pseudomonas: the phosphorylative branch and entner-doudoroff enzymes are regulated by a repressor containing a sugar isomerase domain. HexR Pseudomonas putida
19502436 Identification of an arsenic resistance and arsenic-sensing system in Campylobacter jejuni. ArsR Campylobacter jejuni
19481152 A novel protein that binds to dnrN-dnrO intergenic region of Streptomyces peucetius purified by DNA affinity capture has dihydrolipoamide dehydrogenase activity. DnrO Streptomyces peucetius
19477902 The transcription factor DNR from Pseudomonas aeruginosa specifically requires nitric oxide and haem for the activation of a target promoter in Escherichia coli. DNR Pseudomonas aeruginosa
19465657 Biochemical evidence for ToxR and ToxJ binding to the tox operons of Burkholderia glumae and mutational analysis of ToxR. ToxR Burkholderia glumae
19460999 The SOS response controls integron recombination. LexA Escherichia coli
19446532 Recognition of AT-rich DNA binding sites by the MogR repressor. MogR Listeria monocytogenes
19445953 The vapBC operon from Mycobacterium smegmatis is an autoregulated toxin-antitoxin module that controls growth via inhibition of translation. VapBC Mycobacterium smegmatis
19445690 Identification of ColR binding consensus and prediction of regulon of ColRS two-component system. ColR Pseudomonas
19443542 OmpR positively regulates urease expression to enhance acid survival of Yersinia pseudotuberculosis. OmpR Yersinia pseudotuberculosis
19429622 Involvement of the leucine response transcription factor LeuO in regulation of the genes for sulfa drug efflux. LeuO Escherichia coli
19429617 The ldhA gene, encoding fermentative L-lactate dehydrogenase of Corynebacterium glutamicum, is under the control of positive feedback regulation mediated by LldR. LldR Corynebacterium glutamicum
19429554 Importance of trmE for growth of the psychrophile Pseudomonas syringae at low temperatures. several TFs Pseudomonas syringae
19406897 Identification of novel Ralstonia solanacearum type III effector proteins through translocation analysis of hrpB-regulated gene products. HrpB Ralstonia solanacearum GMI1000
19403527 Regulation of quinone oxidoreductase by the redox-sensing transcriptional regulator QorR in Corynebacterium glutamicum. QorR Corynebacterium glutamicum
19400773 The pleiotropic regulator AdpA-L directly controls the pathway-specific activator of nikkomycin biosynthesis in Streptomyces ansochromogenes. AdpA Streptomyces ansochromogenes
19399190 A single nucleotide change affects fur-dependent regulation of sodB in H. pylori. Fur Helicobacter pylori
19389781 Mce3R, a TetR-type transcriptional repressor, controls the expression of a regulon involved in lipid metabolism in Mycobacterium tuberculosis. Mce3R Mycobacterium tuberculosis
19383689 The cmaR gene of Corynebacterium ammoniagenes performs a novel regulatory role in the metabolism of sulfur-containing amino acids. CmaR Corynebacterium ammoniagenes
19376850 Functional domains of ExsA, the transcriptional activator of the Pseudomonas aeruginosa type III secretion system. ExsA Pseudomonas aeruginosa PA103
19372162 Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays. lexA Corynebacterium glutamicum
19372156 Identification of the binding site of the {sigma}54 hetero-oligomeric FleQ/FleT activator in the flagellar promoters of Rhodobacter sphaeroides. FleQ Rhodobacter sphaeroides WS8
19369699 Anti-activator ExsD forms a 1:1 complex with ExsA to inhibit transcription of type III secretion operons.
19361432 Sequence-specific binding to a subset of IscR-regulated promoters does not require IscR Fe-S cluster ligation. IscR Escherichia coli
19346302 Growth phase and metal-dependent transcriptional regulation of the fecA genes in Helicobacter pylori. Fur, NikR Helicobacter pylori
19332837 Regulation of ldh expression during biotin-limited growth of Corynebacterium glutamicum. SugR Corynebacterium glutamicum
19332834 The roles of the nitrate reductase NarGHJI, the nitrite reductase NirBD and the response regulator GlnR in nitrate assimilation of Mycobacterium tuberculosis. GlnR Mycobacterium tuberculosis
19328843 Genomic analysis identifies a transcription-factor binding motif regulating expression of the alpha C protein in Group B Streptococcus. GBS Streptococcus agalactiae
19324881 Structural and functional analysis of SmeT, the repressor of the Stenotrophomonas maltophilia multidrug efflux pump SmeDEF. SmeT Stenotrophomonas maltophilia
19321498 Phosphate control over nitrogen metabolism in Streptomyces coelicolor: direct and indirect negative control of glnR, glnA, glnII and amtB expression by the response regulator PhoP. PhoP Streptomyces coelicolor
19320834 HlyU acts as an H-NS antirepressor in the regulation of the RTX toxin gene essential for the virulence of the human pathogen Vibrio vulnificus CMCP6. HlyU Vibrio Vulnificus
19298371 The mntH gene encodes the major Mn(2+) transporter in Bradyrhizobium japonicum and is regulated by manganese via the Fur protein. Fur Bradyrhizobium japonicum
19276207 Regulatory targets of quorum sensing in Vibrio cholerae: evidence for two distinct HapR-binding motifs. HapR Vibrio cholerae
19270096 Pseudomonas aeruginosa AlgR controls cyanide production in an AlgZ-dependent manner. AlgR Pseudomonas aeruginosa
19251855 Activation and repression at the Escherichia coli ynfEFGHI operon promoter. NarL/FNR Escherichia coli
19251851 CodY in Staphylococcus aureus: a regulatory link between metabolism and virulence gene expression. CodY Staphylococcus aureus
19251636 Transcription factor function and promoter architecture govern the evolution of bacterial regulons. PhoP Yersinia pestis KIM6
19245326 The Zur of Xanthomonas campestris is involved in hypersensitive response and positively regulates the expression of the hrp cluster via hrpX but not hrpG. Zur Xanthomonas campestris pv. campestris 8004
19236707 Genome-wide analysis of the PreA/PreB (QseB/QseC) regulon of Salmonella enterica serovar Typhimurium. PreA/PreB Salmonella enterica
19234126 Pathogenic adaptation of intracellular bacteria by rewiring a cis-regulatory input function. SsrB Salmonella enterica
19221735 Molecular mechanism of SugR-mediated sugar-dependent expression of the ldhA gene encoding L-lactate dehydrogenase in Corynebacterium glutamicum. SugR Corynebacterium glutamicum
19220751 Cross-talk between two global regulators in Streptomyces: PhoP and AfsR interact in the control of afsS, pstS and phoRP transcription. PhoP Streptomyces coelicolor
19220749 CtrA response regulator binding to the Caulobacter chromosome replication origin is required during nutrient and antibiotic stress as well as during cell cycle progression. CtrA Caulobacter crescentus
19220743 Co-regulation of Xanthomonas campestris virulence by quorum sensing and a novel two-component regulatory system RavS/RavR.
19210620 Bacterial toxin YafQ is an endoribonuclease that associates with the ribosome and blocks translation elongation through sequence-specific and frame-dependent mRNA cleavage. LexA, DinJ-YafQ Escherichia coli
19204896 DNA recognition by the Salmonella enterica serovar Typhimurium transcription factor SlyA. SlyA Salmonella enterica serovar Typhimurium
19202105 Regulation of streptokinase expression by CovR/S in Streptococcus pyogenes: CovR acts through a single high-affinity binding site. CovR Streptococcus pyogenes
19201975 Reciprocal expression of integration host factor and HU in the developmental cycle and infectivity of Legionella pneumophila. IHF Legionella pneumophila
19201805 HtaA is an iron-regulated hemin binding protein involved in the utilization of heme iron in Corynebacterium diphtheriae. DtxR Corynebacterium diphtheriae
19201804 Combinatorial regulation by a novel arrangement of FruA and MrpC2 transcription factors during Myxococcus xanthus development. FruA Myxococcus xanthus
19185608 Proteomic analysis of Vibrio vulnificus M2799 grown under iron-repleted and iron-depleted conditions.
19179401 A combination of unusual transcription factors binds cooperatively to control Myxococcus xanthus developmental gene expression. MrpC2 Myxococcus xanthus
19170889 Threonine phosphorylation prevents promoter DNA binding of the Group B Streptococcus response regulator CovR. CovR Streptococcus agalacticae A909
19170871 Ss-LrpB, a transcriptional regulator from Sulfolobus solfataricus, regulates a gene cluster with a pyruvate ferredoxin oxidoreductase-encoding operon and permease genes. Ss-LrpB Sulfolobus solfataricus
19170600 pH-responsive DNA-binding activity of Helicobacter pylori NikR. NikR Helicobacter pylori
19168737 Direct regulation by the Vibrio cholerae regulator ToxT to modulate colonization and anticolonization pilus expression. ToxT Vibrio cholerae
19151143 Organization and PprB-dependent control of the Pseudomonas aeruginosa tad Locus, involved in Flp pilus biology. PprB Pseudomonas aeruginosa
19150849 Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB. HipAB Escherichia coli
19146703 Development and application of versatile high density microarrays for genome-wide analysis of Streptomyces coelicolor: characterization of the HspR regulon. HspR Streptomyces coelicolor
19139193 Regulation of the Vibrio vulnificus hupA gene by temperature alteration and cyclic AMP receptor protein and evaluation of its role in virulence. CRP Vibrio vulnificus
19130263 Iron uptake regulation in Pseudomonas aeruginosa. FUR
19129220 Oxidation of a single active site suffices for the functional inactivation of the dimeric Bacillus subtilis OhrR repressor in vitro. OhrR Bacillus subtilis
19124047 The serine hydroxymethyltransferase gene glyA in Corynebacterium glutamicum is controlled by GlyR. GlyR Corynebacterium glutamicum
19119856 Helicobacter pylori NikR's interaction with DNA: a two-tiered mode of recognition. NikR Helicobacter pylori
19118357 The two-component system BfrAB regulates expression of ABC transporters in Streptococcus gordonii and Streptococcus sanguinis. BfrA Streptococcus sanguinis
19118356 Characterization of the LacI-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032. RbsR Corynebacterium glutamicum ATCC 13032
19114488 Positive control of ferric siderophore receptor gene expression by the Irr protein in Bradyrhizobium japonicum. Irr Bradyrhizobium japonicum
19114485 TtgV represses two different promoters by recognizing different sequences. TtgT Pseudomonas putida
19103928 sarZ, a sarA family gene, is transcriptionally activated by MgrA and is involved in the regulation of genes encoding exoproteins in Staphylococcus aureus. MgrA Staphylococcus aureus
19103776 GbdR regulates Pseudomonas aeruginosa plcH and pchP transcription in response to choline catabolites. GbdR Pseudomonas aeruginosa
19096521 Genetic and computational identification of a conserved bacterial metabolic module. IolR Caulobacter crescentus
19095019 Complex expression control of the Corynebacterium glutamicum aconitase gene: identification of RamA as a third transcriptional regulator besides AcnR and RipA. RamA Corynebacterium glutamicum
19091955 A dual-signal regulatory circuit activates transcription of a set of divergent operons in Salmonella typhimurium. PhoP, SlyA Salmonella typhimurium
19083232 NdgR, an IclR-like regulator involved in amino-acid-dependent growth, quorum sensing, and antibiotic production in Streptomyces coelicolor. NdgR Streptomyces coelicolor
19077171 Protein-protein interactions between CbbR and RegA (PrrA), transcriptional regulators of the cbb operons of Rhodobacter sphaeroides. CbbR Rhodobacter sphaeroides
19077009 A cyanobacterial AbrB-like protein affects the apparent photosynthetic affinity for CO2 by modulating low-CO2-induced gene expression. AbrB / LexA Synechocystis sp. strain PCC 6803
19074398 Leucine-responsive regulatory protein (Lrp) acts as a virulence repressor in Salmonella enterica serovar Typhimurium. Lrp Salmonella enterica serovar Typhimurium
19074391 The Lactobacillus plantarum ftsH gene is a novel member of the CtsR stress response regulon. CtsR Lactobacillus plantarum
19074384 The response regulator RpaB binds to the upstream element of photosystem I genes to work for positive regulation under low-light conditions in Synechocystis sp. Strain PCC 6803. RpaB Synechocystis sp. Strain PCC 6803
1907266 AlgR, a response regulator controlling mucoidy in Pseudomonas aeruginosa, binds to the FUS sites of the algD promoter located unusually far upstream from the mRNA start site. AlgR Pseudomonas aeruginosa
19060154 Functional roles of arcA, etrA, cyclic AMP (cAMP)-cAMP receptor protein, and cya in the arsenate respiration pathway in Shewanella sp. strain ANA-3. CRP Shewanella sp. strain ANA-3
19060134 The global virulence regulator PhcA negatively controls the Ralstonia solanacearum hrp regulatory cascade by repressing expression of the PrhIR signaling proteins. PhcA Ralstonia solanacearum
19054112 Characterization and transcriptional analysis of an ECF sigma factor from Xanthomonas campestris pv. campestris. sigma(E) Xanthomonas campestris pv. campestris
19054104 OxyR is involved in the expression of thioredoxin reductase TrxB in Pseudomonas putida. OxyR Pseudomonas putida
19052235 Genome-scale reconstruction of the Lrp regulatory network in Escherichia coli. Lrp Escherichia coli
19050850 Comparative genomic study of spo0E family genes and elucidation of the role of Spo0E in Bacillus anthracis. AbrB Bacillus anthracis
19047757 Dual regulation of zwf-1 by both 2-keto-3-deoxy-6-phosphogluconate and oxidative stress in Pseudomonas putida. HexR Pseudomonas putida KT2440
19047729 Structure and function of the LysR-type transcriptional regulator (LTTR) family proteins.
19047352 Transcription of clpP is enhanced by a unique tandem repeat sequence in Streptococcus mutans. CtsR Streptococcus mutans
19047347 Involvement of the LuxR-type transcriptional regulator RamA in regulation of expression of the gapA gene, encoding glyceraldehyde-3-phosphate dehydrogenase of Corynebacterium glutamicum. RamA Corynebacterium glutamicum
19041911 Dual transcriptional control of the acetaldehyde dehydrogenase gene ald of Corynebacterium glutamicum by RamA and RamB. RamA Corynebacterium glutamicum
19028903 Expression of the cpdA gene, encoding a 3',5'-cyclic AMP (cAMP) phosphodiesterase, is positively regulated by the cAMP-cAMP receptor protein complex. CRP Vibrio vulnificus
19028892 Identification and characterization of a bacterial transport system for the uptake of pyruvate, propionate, and acetate in Corynebacterium glutamicum. RamA Corynebacterium glutamicum
19028891 Identification and characterization of NocR as a positive transcriptional regulator of the beta-lactam nocardicin A in Nocardia uniformis. NocR Nocardia uniformis
19028884 OryR is a LuxR-family protein involved in interkingdom signaling between pathogenic Xanthomonas oryzae pv. oryzae and rice. OryR Xanthomonas oryzae pv. oryzae
19027363 Mce2R from Mycobacterium tuberculosis represses the expression of the mce2 operon. Mce2R Mycobacterium tuberculosis
19019140 Identification of VceA and VceC, two members of the VjbR regulon that are translocated into macrophages by the Brucella type IV secretion system. VjbR Brucella spp.
19007408 Functional analysis of NsrR, a nitric oxide-sensing Rrf2 repressor in Neisseria gonorrhoeae. NsrR Neisseria gonorrhoeae
1900366 Purification of the regulatory protein AlgR1 and its binding in the far upstream region of the algD promoter in Pseudomonas aeruginosa. AlgR1 Pseudomonas aeruginosa
1900277 Positive FNR-like control of anaerobic arginine degradation and nitrate respiration in Pseudomonas aeruginosa. Anr Pseudomonas aeruginosa
18997424 Anaerobic regulation of citrate fermentation by CitAB in Escherichia coli. CitB E.coli
18990187 OxyR tightly regulates catalase expression in Neisseria meningitidis through both repression and activation mechanisms. OxyR Neisseria meningitidis
18988622 Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in L-lactate and sugar utilization. LldR Corynebacterium glutamicum
18984159 The MatP/matS site-specific system organizes the terminus region of the E. coli chromosome into a macrodomain. MatP Escherichia coli
18978065 MtrR modulates rpoH expression and levels of antimicrobial resistance in Neisseria gonorrhoeae. MtrR Neisseria gonorrhoeae FA19
18977770 Trans-translation is involved in the CcpA-dependent tagging and degradation of TreP in Bacillus subtilis. CcpA Bacillus subtilis
18957610 Functional impact of mutational activation on the Listeria monocytogenes central virulence regulator PrfA. PrfA Listeria monocytogenes
18957590 The transcription regulator AllR senses both allantoin and glyoxylate and controls a set of genes for degradation and reutilization of purines. AllR E.coli
18950641 Two levels of cooperativeness in the binding of TodT to the tod operon promoter. TodT Pseudomonas putida
18931106 Identification of Bdellovibrio bacteriovorus HD100 Bd0714 as a Nudix dGTPase. Bd0714 Bdellovibrio bacteriovorus
18854009 The dual transcriptional regulator CysR in Corynebacterium glutamicum ATCC 13032 controls a subset of genes of the McbR regulon in response to the availability of sulphide acceptor molecules. CysR Corynebacterium glutamicum
18849434 The hpx genetic system for hypoxanthine assimilation as a nitrogen source in Klebsiella pneumoniae: gene organization and transcriptional regulation. HpxR Klebsiella pneumoniae
18849430 Flexibility of Vibrio cholerae ToxT in transcription activation of genes having altered promoter spacing. ToxT Vibrio cholerae
18842098 Sinorhizobium meliloti regulator MucR couples exopolysaccharide synthesis and motility. ExpR, MucR Sinorhizobium meliloti
18837698 The copper-responsive repressor CopR of Lactococcus lactis is a 'winged helix' protein. CopR Lactococcus lactis
18832311 Nitrate-responsive NarX-NarL represses arginine-mediated induction of the Pseudomonas aeruginosa arginine fermentation arcDABC operon. NarL Pseudomonas aeruginosa
18808381 GadX/GadW-dependent regulation of the Escherichia coli acid fitness island: transcriptional control at the gadY-gadW divergent promoters and identification of four novel 42 bp GadX/GadW-specific binding sites. GadX/GadW Escherichia coli
18805984 Transcriptional regulation of the citrate gene cluster of Enterococcus faecalis Involves the GntR family transcriptional activator CitO. CitO Enterococcus faecalis
18800184 Transcriptional regulation of Corynebacterium glutamicum methionine biosynthesis genes in response to methionine supplementation under oxygen deprivation. McbR Corynebacterium glutamicum
18790868 PecS is a global regulator of the symptomatic phase in the phytopathogenic bacterium Erwinia chrysanthemi 3937. PecS Dickeya dadantii
18790698 High-affinity Ni2+ binding selectively promotes binding of Helicobacter pylori NikR to its target urease promoter. NikR Helicobacter pylori
18776020 The bile response repressor BreR regulates expression of the Vibrio cholerae breAB efflux system operon. BreR Vibrio Cholera
18773116 PerR confers phagocytic killing resistance and allows pharyngeal colonization by group A Streptococcus. PerR Streptococcus pyogenes
18761670 DeltaG-based prediction and experimental confirmation of SYCRP1-binding sites on the Synechocystis genome. Crp Synechocystis sp. PCC6803
18761017 CRP binding and transcription activation at CRP-S sites. CRP/Sxy H. influenzae
18757788 Effect of upstream curvature and transcription factors H-NS and LRP on the efficiency of Escherichia coli rRNA promoters P1 and P2 - a phasing analysis. H-NS Escherichia coli
18757728 The Pseudomonas aeruginosa multidrug efflux regulator MexR uses an oxidation-sensing mechanism. MexR Pseudomonas aeruginosa
18757533 Characterization of irvR, a novel regulator of the irvA-dependent pathway required for genetic competence and dextran-dependent aggregation in Streptococcus mutans. IrvR Streptococcus mutans
18713737 Vibrio vulnificus rpoS expression is repressed by direct binding of cAMP-cAMP receptor protein complex to its two promoter regions. CRP Vibrio vulnificus
18710863 The cyclic AMP receptor protein, CRP, is required for both virulence and expression of the minimal CRP regulon in Yersinia pestis biovar microtus. CRP Yersinia pestis Biovar microtus
18710862 CcpA mediates the catabolite repression of tst in Staphylococcus aureus. CcpA Staphylococcus aureus
18694822 A putative colR(XC1049)-colS(XC1050) two-component signal transduction system in Xanthomonas campestris positively regulates hrpC and hrpE operons and is involved in virulence, the hypersensitive response and tolerance to various stresses.
18689515 Binding sequences for RdgB, a DNA damage-responsive transcriptional activator, and temperature-dependent expression of bacteriocin and pectin lyase genes in Pectobacterium carotovorum subsp. carotovorum. RdgB Pectobacterium carotovorum subsp. carotovorum
18689485 Nitrogen control in Mycobacterium smegmatis: nitrogen-dependent expression of ammonium transport and assimilation proteins depends on the OmpR-type regulator GlnR. GlnR Mycobacterium smegmatis
18689483 Regulation of the Rhodobacter sphaeroides 2.4.1 hemA gene by PrrA and FnrL. PrrA and FnrL Rhodobacter sphaeroides 2.4.1
18685110 A key developmental regulator controls the synthesis of the antibiotic erythromycin in Saccharopolyspora erythraea. BldD Saccharopolyspora
18683632 Fumarate and nitrate reduction (FNR) dependent activation of the Escherichia coli anaerobic ribonucleotide reductase nrdDG promoter. FNR Escherichia coli
18681939 The Vibrio harveyi master quorum-sensing regulator, LuxR, a TetR-type protein is both an activator and a repressor: DNA recognition and binding specificity at target promoters. LuxR Vibrio harveyi
18681938 The cia operon of Streptococcus mutans encodes a unique component required for calcium-mediated autoregulation. CiaR Streptococcus mutans
1868094 Structural dynamics and functional domains of the fur protein.
18678876 Modulation of the regulatory activity of bacterial two-component systems by SlyA. SlyA Salmonella enterica serovar Typhimurium
18678666 TrxR, a new CovR-repressed response regulator that activates the Mga virulence regulon in group A Streptococcus. CovR Streptococcus pyogenes M1
18676710 Regulation of Lactobacillus casei sorbitol utilization genes requires DNA-binding transcriptional activator GutR and the conserved protein GutM. GutR Lactobacillus casei
18676675 Transition state regulator AbrB inhibits transcription of Bacillus amyloliquefaciens FZB45 phytase through binding at two distinct sites located within the extended phyC promoter region. AbrB Bacillus amyloliquefaciens FZB45
18672305 Ers a Crp/Fnr-like transcriptional regulator of Enterococcus faecalis. Ers Enterococcus faecalis
18667724 An AbrB-like transcriptional regulator, Sll0822, is essential for the activation of nitrogen-regulated genes in Synechocystis sp. PCC 6803. sll0822 Synechocystis sp. PCC 6803
18667568 Phosphate-dependent regulation of the low- and high-affinity transport systems in the model actinomycete Streptomyces coelicolor. PhoP Streptomyces coelicolor
18653527 A high-throughput percentage-of-binding strategy to measure binding energies in DNA-protein interactions: application to genome-scale site discovery. ArcA Shewanella oneidensis
18633278 Positive regulation of pyoluteorin biosynthesis in Pseudomonas sp. M18 by quorum-sensing regulator VqsR. VqsR Pseudomonas sp. M18
18632116 AdcAII, a new pneumococcal Zn-binding protein homologous with ABC transporters: biochemical and structural analysis. AdcR Streptococcus pneumoniae
18625553 N-Acyl-3-amino-5H-furanone derivatives as new inhibitors of LuxR-dependent quorum sensing: Synthesis, biological evaluation and binding mode study. LuxR Vibrio Fischeri
18599838 Functional genomics of PycR, a LysR family transcriptional regulator essential for maintenance of Pseudomonas aeruginosa in the rat lung. PycR Pseudomonas aeruginosa
18599828 Point mutations within the streptococcal regulator of virulence (Srv) alter protein-DNA interactions and Srv function. Srv Streptococcus pyogenes
18591226 Drosophila melanogaster-based screening for multihost virulence factors of Pseudomonas aeruginosa PA14 and identification of a virulence-attenuating factor, HudA. HudR Pseudomonas aeruginosa
18586823 The Zur of Xanthomonas campestris functions as a repressor and an activator of putative zinc homeostasis genes via recognizing two distinct sequences within its target promoters. Zur Xanthomonas campestris
18585392 A degenerate tripartite DNA-binding site required for activation of ComA-dependent quorum response gene expression in Bacillus subtilis. ComA Bacillus subtilis
18579523 A consensus sequence for binding of SmcR, a Vibrio vulnificus LuxR homologue, and genome-wide identification of the SmcR regulon. SmcR Vibrio vulnificus
18579153 Specificity of the TraA-DNA interaction in the regulation of the pPD1-encoded sex pheromone response in Enterococcus faecalis. TraA Enterococcus faecalis
18573287 The GlxR regulon of the amino acid producer Corynebacterium glutamicum: in silico and in vitro detection of DNA binding sites of a global transcription regulator. GlxR Corynebacterium glutamicum
18567656 The uncharacterized transcription factor YdhM is the regulator of the nemA gene, encoding N-ethylmaleimide reductase. YdhM E.coli
18565772 Molecular properties and transcriptional control of the phosphofructokinase and pyruvate kinase genes in a ruminal bacterium, Streptococcus bovis. CcpA Streptococcus bovis
18555801 A Synechocystis LexA-orthologue binds direct repeats in target genes. LexA Synechocystis sp. strain PCC 6803
18554322 Type III secretion system 1 genes in Vibrio parahaemolyticus are positively regulated by ExsA and negatively regulated by ExsD. ExsA Vibrio parahaemolyticus NY-4
18547423 The interplay of StyR and IHF regulates substrate-dependent induction and carbon catabolite repression of styrene catabolism genes in Pseudomonas fluorescens ST. StyR Pseudomonas fluorescens
18544072 The styrene-responsive StyS/StyR regulation system controls expression of an auxiliary phenylacetyl-coenzyme A ligase: implications for rapid metabolic coupling of the styrene upper- and lower-degradative pathways. PaaX Pseudomonas sp. strain Y2
18539789 Transcriptome analysis of the Lactococcus lactis ArgR and AhrC regulons. ArgR Lactococcus lactis
18539745 Global regulation by (p)ppGpp and CodY in Streptococcus mutans. CodY Streptococcus mutans
18524933 The role of SOS boxes in enteric bacteriocin regulation. LexA Escherichia coli
18524913 The Pseudomonas aeruginosa PsrA responds to long-chain fatty acid signals to regulate the fadBA5 beta-oxidation operon. PsrA Pseudomonas aeruginosa
18515420 Competitive and cooperative effects in quorum-sensing-regulated galactoglucan biosynthesis in Sinorhizobium meliloti. ExpR Sinorhizobium meliloti
18515418 Opposite effects of Mn2+ and Zn2+ on PsaR-mediated expression of the virulence genes pcpA, prtA, and psaBCA of Streptococcus pneumoniae. PsaR Streptococcus pneumoniae
18515344 The Escherichia coli RutR transcription factor binds at targets within genes as well as intergenic regions. RutR Escherichia coli
18510559 Multiple factors contribute to keeping levels of the symbiosis regulator RscS low. Vibrio Fischeri
18502871 Lysine represses transcription of the Escherichia coli dapB gene by preventing its activation by the ArgP activator. ArgP Escherichia coli
18502855 Interaction of DevR with multiple binding sites synergistically activates divergent transcription of narK2-Rv1738 genes in Mycobacterium tuberculosis. DevR Mycobacterium tuberculosis
18490461 CcpA-mediated repression of streptolysin S expression and virulence in the group A streptococcus. CcpA Streptococcus pyogenes MGAS5005
18487335 Role of the global transcriptional regulator PrrA in Rhodobacter sphaeroides 2.4.1: combined transcriptome and proteome analysis. PrrA Rhodobacter sphaeroides
18487325 Transcription of the ehx enterohemolysin gene is positively regulated by GrlA, a global regulator encoded within the locus of enterocyte effacement in enterohemorrhagic Escherichia coli. GrlA E. Coli
18487321 AinS quorum sensing regulates the Vibrio fischeri acetate switch. AinS Vibrio Fischeri
18485075 Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor. FleQ Pseudomonas aeruginosa
18469111 Modulation of covR expression in Streptococcus mutans UA159. CovR Streptococcus mutans UA159
18469094 The putative hybrid sensor kinase SypF coordinates biofilm formation in Vibrio fischeri by acting upstream of two response regulators, SypG and VpsR. VpsR Vibrio Fischeri
18458065 Cif is negatively regulated by the TetR family repressor CifR. CifR Pseudomonas aeruginosa
18456804 Integration host factor positively regulates virulence gene expression in Vibrio cholerae. H-NS Vibrio Cholera
18456803 Transcription factors CysB and SfnR constitute the hierarchical regulatory system for the sulfate starvation response in Pseudomonas putida. SfnR Pseudomonas putida
18452510 Selective repression by Fis and H-NS at the Escherichia coli dps promoter. Fis Escherichia coli
18449225 Flavonoid-responsive nodY-lacZ expression in three phylogenetically different Bradyrhizobium groups. NodD1 Bradyrhizobium groups
18437426 Analyses of binding sequences of the two LexA proteins of Xanthomonas axonopodis pathovar citri. LexA Xanthomonas axonopodis pathovar citri
18434315 Molecular mechanism for establishment of signal-dependent regulation in the PhoP/PhoQ system. SlyA Salmonella enterica serovar typhimurium
18431050 Prediction and experimental testing of ferric uptake regulator regulons in vibrios. Fur Vibrio salmonicida
18424527 The ArgP protein stimulates the Klebsiella pneumoniae gdhA promoter in a lysine-sensitive manner. ArgP Klebsiella pneumoniae
18416820 Assessment of CcpA-mediated catabolite control of gene expression in Bacillus cereus ATCC 14579. CcpA Bacillus cereus
1840615 Identification of NolR, a negative transacting factor controlling the nod regulon in Rhizobium meliloti. NolR Rhizobium meliloti
18391009 Expression of the Mycobacterium tuberculosis acr-coregulated genes from the DevR (DosR) regulon is controlled by multiple levels of regulation. DevR (DosR) Mycobacterium tuberculosis
18375805 SloR modulation of the Streptococcus mutans acid tolerance response involves the GcrR response regulator as an essential intermediary. GcrR Streptococcus mutans
18375800 The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences. UriR Corynebacterium glutamicum
18373522 Characterization of ExsA and of ExsA-dependent promoters required for expression of the Pseudomonas aeruginosa type III secretion system. ExsA Pseudomonas aeruginosa
18366809 Identification and characterization of PhoP regulon members in Yersinia pestis biovar Microtus. PhoP Yersinia pestis biovar Microtus
18366600 Characterization of the Shewanella oneidensis Fur gene: roles in iron and acid tolerance response. Fur Shewanella oneidensis
18363796 Characterization of the PvdS-regulated promoter motif in Pseudomonas syringae pv. tomato DC3000 reveals regulon members and insights regarding PvdS function in other pseudomonads. PvdS None
18359816 Cooperative binding of phosphorylated DevR to upstream sites is necessary and sufficient for activation of the Rv3134c-devRS operon in Mycobacterium tuberculosis: implication in the induction of DevR target genes. DevR (DosR) Mycobacterium tuberculosis
18359810 An ortholog of OxyR in Legionella pneumophila is expressed postexponentially and negatively regulates the alkyl hydroperoxide reductase (ahpC2D) operon. OxyR Legionella pneumophila
18355281 Triple transcriptional control of the resuscitation promoting factor 2 (rpf2) gene of Corynebacterium glutamicum by the regulators of acetate metabolism RamA and RamB and the cAMP-dependent regulator GlxR. GlxR Corynebacterium glutamicum
18346968 Autoregulation of the Escherichia coli melR promoter: repression involves four molecules of MelR. MelR Escherichia coli
18344368 Regulation of the Bacillus subtilis yciC gene and insights into the DNA-binding specificity of the zinc-sensing metalloregulator Zur. Zur Bacillus subtilis
18344367 Evidence that AphB, essential for the virulence of Vibrio vulnificus, is a global regulator. AphB Vibrio vulnificus
18344362 Fine-tuning of galactoglucan biosynthesis in Sinorhizobium meliloti by differential WggR (ExpG)-, PhoB-, and MucR-dependent regulation of two promoters. MucR Sinorhizobium meliloti
18341582 The coordinate regulation of multiple terminal oxidases by the Pseudomonas putida ANR global regulator. ANR Pseudomonas putida
18340041 Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts. Fis Escherichia coli
18329386 Identification of operator sites within the upstream region of the putative mce2R gene from mycobacteria. Mce2R Mycobacterium tuberculosis
18316381 Limited role for iron regulation in Coxiella burnetii pathogenesis. Fur Coxiella burnetii
18310036 Conditionally positive effect of the TetR-family transcriptional regulator AtrA on streptomycin production by Streptomyces griseus. AtrA Streptomyces griseus
18310026 Characterization of a Pseudomonas putida ABC transporter (AatJMQP) required for acidic amino acid uptake: biochemical properties and regulation by the Aau two-component system. AauR Pseudomonas putida KT2440
18310022 Relevance of nucleotides of the PcaU binding site from Acinetobacter baylyi. PcaU Acinetobacter baylyi
18310017 Regulation of the pehA gene encoding the major polygalacturonase of Xanthomonas campestris by Clp and RpfF. Clp Xanthomonas campestris pv. campestris
18304349 Study of the role of Mce3R on the transcription of mce genes of Mycobacterium tuberculosis. Mce3R Mycobacterium tuberculosis
18296524 ArnR, a novel transcriptional regulator, represses expression of the narKGHJI operon in Corynebacterium glutamicum. ArnR Corynebacterium glutamicum
18284589 Bicarbonate-mediated transcriptional activation of divergent operons by the virulence regulatory protein, RegA, from Citrobacter rodentium. RegA Citrobacter rodentium
1828282 [Principles of surgical treatment of inguinal hernia]. Amam Akak
18281395 The iron-responsive Fur regulon in Yersinia pestis. Fur Yersinia Pestis
18276643 Transcriptional regulation of NAD metabolism in bacteria: NrtR family of Nudix-related regulators. NrtR Synechocystis sp. and Shewanella oneidensis
18263722 Dual role of LldR in regulation of the lldPRD operon, involved in L-lactate metabolism in Escherichia coli. LldR Escherichia coli
18227264 Characterization of the Escherichia coli K-12 ydhYVWXUT operon: regulation by FNR, NarL and NarP. FNR/NarL/NarP Escherichia coli
18227247 Regulation of Pseudomonas aeruginosa ptxR by Vfr. Vfr Pseudomonas aeruginosa
18227063 Molecular analysis of BcrR, a membrane-bound bacitracin sensor and DNA-binding protein from Enterococcus faecalis. BcrR Enterococcus faecalis
18226834 PepA and ArgR do not regulate Cre recombination at the bacteriophage P1 loxP site. ArgR Escherichia coli
18223092 Regulation of swarming motility and flhDC(Sm) expression by RssAB signaling in Serratia marcescens. RssB Serratia marcescens
18221523 Probing regulon of ArcA in Shewanella oneidensis MR-1 by integrated genomic analyses. ArcA Shewanella oneidensis
18214545 The genistein stimulon of Bradyrhizobium japonicum. NodW Bradyrhizobium japonicum.
18212084 Analysis of the protective capacity of three Streptococcus suis proteins induced under divalent-cation-limited conditions. AdcR Streptococcus suis
18198339 A negative feedback loop involving small RNAs accelerates Vibrio cholerae's transition out of quorum-sensing mode. LuxO / HapR Vibrio cholerae
18194340 Characterization of DegU-dependent expression of bpr in Bacillus subtilis. DegU Bacillus subtilis
18183389 Regulation of expression of general components of the phosphoenolpyruvate: carbohydrate phosphotransferase system (PTS) by the global regulator SugR in Corynebacterium glutamicum. SugR Corynebacterium glutamicum
18179599 The Streptomyces coelicolor GlnR regulon: identification of new GlnR targets and evidence for a central role of GlnR in nitrogen metabolism in actinomycetes. GlnR Streptomyces coelicolor
18178742 CmeR functions as a pleiotropic regulator and is required for optimal colonization of Campylobacter jejuni in vivo. CmeR Campylobacter jejuni
18178737 Pseudomonas aeruginosa AlgR regulates type IV pilus biosynthesis by activating transcription of the fimU-pilVWXY1Y2E operon. AlgR Pseudomonas aeruginosa
18178734 SarA of Staphylococcus aureus binds to the sarA promoter to regulate gene expression. SarA Staphylococcus aureus
18177376 The GacA global regulator is required for the appropriate expression of Erwinia chrysanthemi 3937 pathogenicity genes during plant infection. GacA Erwinia chrysanthemi
18175178 Regulation of the type II secretion structural gene xpsE in Xanthomonas campestris Pathovar campestris by the global transcription regulator Clp. Clp Xanthomonas campestris pv campestris
18166197 Hierarchical binding of the TodT response regulator to its multiple recognition sites at the tod pathway operon promoter. TodT Pseudomonas putida DOT-T1E
18164038 Interplay of two quorum sensing regulation systems of Vibrio fischeri. Vibrio Fischeri
18156266 The LysR-type transcriptional regulator LeuO controls expression of several genes in Salmonella enterica serovar Typhi. LeuO Salmonella enterica serovar Typhi
18083819 A mutational analysis defines Vibrio fischeri LuxR binding sites. Vibrio Fischeri
18083815 Characterization of the SOS regulon of Caulobacter crescentus. LexA Caulobacter crescentus
18083814 Genetic and biochemical analysis of CodY-binding sites in Bacillus subtilis. CodY Bacillus subtilis
18083811 Differential regulation of high-affinity phosphate transport systems of Mycobacterium smegmatis: identification of PhnF, a repressor of the phnDCE operon. PhnF Mycobacterium smegmatis
18056476 MisR/MisS two-component regulon in Neisseria meningitidis. MisR Neisseria meningitidis
18055596 Regulation of the yjjQ-bglJ operon, encoding LuxR-type transcription factors, and the divergent yjjP gene by H-NS and LeuO. H-NS Escherichia coli K-12
18055594 Binding site determinants for the LysR-type transcriptional regulator PcaQ in the legume endosymbiont Sinorhizobium meliloti. PcaQ Sinorhizobium meliloti
18048935 Regulation of the Pseudomonas aeruginosa toxA, regA and ptxR genes by the iron-starvation sigma factor PvdS under reduced levels of oxygen. PvdS Pseudomonas aeruginosa
18048925 CsoR regulates the copper efflux operon copZA in Bacillus subtilis. CsoR Bacillus subtilis
18047570 Co-ordinated regulation of gluconate catabolism and glucose uptake in Corynebacterium glutamicum by two functionally equivalent transcriptional regulators, GntR1 and GntR2. GntR Corynebacterium glutamicum
18045385 RsaL provides quorum sensing homeostasis and functions as a global regulator of gene expression in Pseudomonas aeruginosa. RsaL Pseudomonas aeruginosa
18039772 Regulation of L-lactate utilization by the FadR-type regulator LldR of Corynebacterium glutamicum. LldR Corynebacterium glutamicum
18024519 CodY of Streptococcus pneumoniae: link between nutritional gene regulation and colonization. CodY Streptococcus pneumoniae
18022383 Isolation and functional characterization of Spirulina D6D gene promoter: role of a putative GntR transcription factor in transcriptional regulation of D6D gene expression. GntR Spirulina platensis C1
18005413 The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate:sugar phosphotransferase system (PTS) in Corynebacterium glutamicum. SugR Corynebacterium glutamicum
17993525 Characterization of the CopR regulon of Lactococcus lactis IL1403. CopR Lactococcus lactis IL1403
17988394 Identification and regulation of expression of a gene encoding a filamentous hemagglutinin-related protein in Bordetella holmesii. BvgA Bordetella holmesii
17986203 Complexity in efflux pump control: cross-regulation by the paralogues TtgV and TtgT. TtgV Pseudomonas putida DOT-T1E
17985115 Role of sigma54 in the regulation of genes involved in type I and type IV pili biogenesis in Xylella fastidiosa. RpoN Xylella fastidiosa
17981966 The GntR-like regulator TauR activates expression of taurine utilization genes in Rhodobacter capsulatus. TauR Rhodobacter capsulatus
17981963 The NtrC family regulator AlgB, which controls alginate biosynthesis in mucoid Pseudomonas aeruginosa, binds directly to the algD promoter. AlgB Pseudomonas aeruginosa PAO1
17933899 Direct transcriptional control of the plasminogen activator gene of Yersinia pestis by the cyclic AMP receptor protein. Crp Yersinia pestis
17933895 Regulation of D-xylose metabolism in Caulobacter crescentus by a LacI-type repressor. XylR Caulobacter crescentus
17933893 Cohabitation of two different lexA regulons in Pseudomonas putida. LexA Pseudomonas putida
17932079 Distribution of stable DnaA-binding sites on the Bacillus subtilis genome detected using a modified ChIP-chip method. DnaA Bacillus subtilis
17921503 Discovery of Fur binding site clusters in Escherichia coli by information theory models.
17919280 RutR is the uracil/thymine-sensing master regulator of a set of genes for synthesis and degradation of pyrimidines. RutR E.coli
17908208 LeuO antagonizes H-NS and StpA-dependent repression in Salmonella enterica ompS1. LeuO Salmonella enterica
17906150 Phosphate control of phoA, phoC and phoD gene expression in Streptomyces coelicolor reveals significant differences in binding of PhoP to their promoter regions. PhoP Streptomyces coelicolor
17905987 Distribution of centromere-like parS sites in bacteria: insights from comparative genomics. ParA, ParB Bacillus subtilis
17905984 Characterization of an active partition system for the Enterococcus faecalis pheromone-responding plasmid pAD1. RepC Enterococcus faecalis
17905983 Anaplasma phagocytophilum p44 mRNA expression is differentially regulated in mammalian and tick host cells: involvement of the DNA binding protein ApxR. ApxR Anaplasma phagocytophilum
17905980 The catabolite control protein CcpA binds to Pmga and influences expression of the virulence regulator Mga in the Group A streptococcus. CCR Bacillus subtilis
17892462 Alternate SlyA and H-NS nucleoprotein complexes control hlyE expression in Escherichia coli K-12. SlyA Escherichia coli K-12
17890167 Structural studies on Vibrio cholerae ToxR periplasmic and cytoplasmic domains. ToxR Vibrio cholerae
17877713 A Pseudomonas aeruginosa transcription factor that senses fatty acid structure. DesT Pseudomonas aeruginosa
17875629 Regulatory networks controlling Vibrio cholerae virulence gene expression. Vibrio cholerae
17854404 The LysR-type regulator AtzR binding site: DNA sequences involved in activation, repression and cyanuric acid-dependent repositioning. AtzR Pseudomonas
17850814 ArgR-dependent repression of arginine and histidine transport genes in Escherichia coli K-12. ArgR Escherichia coli
17827501 SlyA and H-NS regulate transcription of the Escherichia coli K5 capsule gene cluster, and expression of slyA in Escherichia coli is temperature-dependent, positively autoregulated, and independent of H-NS. SlyA Escherichia coli
17827317 Characterization of regulatory pathways in Xylella fastidiosa: genes and phenotypes controlled by algU.
17803774 The natural furanone (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone disrupts quorum sensing-regulated gene expression in Vibrio harveyi by decreasing the DNA-binding activity of the transcriptional regulator protein luxR. LuxR Vibrio harveyi
17784909 The RovA regulons of Yersinia enterocolitica and Yersinia pestis are distinct: evidence that many RovA-regulated genes were acquired more recently than the core genome. RovA
17768252 Transcriptional regulation of the sulfate-starvation-induced gene sfnA by a sigma54-dependent activator of Pseudomonas putida. SfnR Pseudomonas putida
17768239 The cyclic AMP receptor protein modulates quorum sensing, motility and multiple genes that affect intestinal colonization in Vibrio cholerae. CRP Vibrio cholerae
17766417 Pseudomonas aeruginosa AlgR represses the Rhl quorum-sensing system in a biofilm-specific manner. AlgR Pseudomonas aeruginosa
17725564 The MarR-type repressor MhqR (YkvE) regulates multiple dioxygenases/glyoxalases and an azoreductase which confer resistance to 2-methylhydroquinone and catechol in Bacillus subtilis. MhqR Bacillus subtilis
17725562 Identification of the genes directly controlled by the response regulator CiaR in Streptococcus pneumoniae: five out of 15 promoters drive expression of small non-coding RNAs. CiaR Streptococcus pneumoniae
17725558 Repression of Clostridium difficile toxin gene expression by CodY. CodY Clostridium difficile
17703195 Electrophoretic mobility shift assay (EMSA) for detecting protein-nucleic acid interactions. CRP, LacI Escherichia coli
17693518 The alcohol dehydrogenase gene adhA in Corynebacterium glutamicum is subject to carbon catabolite repression. RamB Corynebacterium glutamicum
17693507 Transcriptional regulation of stress response and motility functions in Helicobacter pylori is mediated by HspR and HrcA. HrcA Helicobacter pylori
17693498 Quorum-sensing regulation of the production of Blp bacteriocins in Streptococcus thermophilus. BlpR Streptococcus thermophilus
17675388 MarR-like transcriptional regulator involved in detoxification of aromatic compounds in Sulfolobus solfataricus. BldR Sulfolobus solfataricus
17675384 Role of nucleoid-associated proteins Hha and H-NS in expression of Salmonella enterica activators HilD, HilC, and RtsA required for cell invasion. H-NS Salmonella enterica
17675375 Control of methionine synthesis and uptake by MetR and homocysteine in Streptococcus mutans. MetR Streptococcus mutans
17661707 Regulation of virulence in Vibrio cholerae: the ToxR regulon. ToxR Vibrio cholerae
17660417 LiaRS-dependent gene expression is embedded in transition state regulation in Bacillus subtilis. AbrB Bacillus subtilis
17660406 OmpR negatively regulates expression of invasin in Yersinia enterocolitica. OmpR
17660290 Mutational analysis of active site residues essential for sensing of organic hydroperoxides by Bacillus subtilis OhrR. OhrR Bacillus subtilis
17646983 Transcriptionally regulated adhA gene encodes alcohol dehydrogenase required for ethanol and n-propanol utilization in Corynebacterium glutamicum R. AdhA Corynebacterium glutamicum R
17644067 Characterization of the multidrug efflux regulator AcrR from Escherichia coli. AcrR Escherichia coli
17640279 The novel transcriptional regulator SczA mediates protection against Zn2+ stress by activation of the Zn2+-resistance gene czcD in Streptococcus pneumoniae. SczA Streptococcus pneumoniae
17640272 Farnesol, a common sesquiterpene, inhibits PQS production in Pseudomonas aeruginosa. PqsR Pseudomonas aeruginosa
17640269 The tyrosine degradation gene hppD is transcriptionally activated by HpdA and repressed by HpdR in Streptomyces coelicolor, while hpdA is negatively autoregulated and repressed by HpdR. HpdA Streptomyces coelicolor
17630976 The response regulator SsrB activates expression of diverse Salmonella pathogenicity island 2 promoters and counters silencing by the nucleoid-associated protein H-NS. SsrB Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
17630305 Analysis of a ferric uptake regulator (Fur) mutant of Desulfovibrio vulgaris Hildenborough.
17630298 Transcription and regulation of the bidirectional hydrogenase in the cyanobacterium Nostoc sp. strain PCC 7120. LexA Nostoc sp. strain PCC 7120
17627767 EfeUOB (YcdNOB) is a tripartite, acid-induced and CpxAR-regulated, low-pH Fe2+ transporter that is cryptic in Escherichia coli K-12 but functional in E. coli O157:H7. Fur Escherichia coli str. K-12 substr. MG1655
17616585 Regulation of gbpC expression in Streptococcus mutans. CovR Streptococcus mutans
17601788 Regulation of the alpha-crystallin gene acr2 by the MprAB two-component system of Mycobacterium tuberculosis. MprA Mycobacterium tuberculosis
17600052 Quorum-sensing-regulated transcriptional initiation of plasmid transfer and replication genes in Rhizobium leguminosarum biovar viciae. TraR Rhizobium leguminosarum biovar viciae
17590235 Bioluminescence in Vibrio fischeri is controlled by the redox-responsive regulator ArcA. ArcA Vibrio Fischeri
17586650 Two-component response regulators of Vibrio fischeri: identification, mutagenesis, and characterization. Vibrio Fischeri
17586628 Dual role of OhrR as a repressor and an activator in response to organic hydroperoxides in Streptomyces coelicolor. OhrR Streptomyces coelicolor
17586627 BigR, a transcriptional repressor from plant-associated bacteria, regulates an operon implicated in biofilm growth. BigR Xylella fastidiosa
17581124 A proline iminopeptidase gene upregulated in planta by a LuxR homologue is essential for pathogenicity of Xanthomonas campestris pv. campestris. XccR Xanthomonas campestris pv. campestris
17581119 SaPI operon I is required for SaPI packaging and is controlled by LexA. LexA Staphylococcus aureus
17573476 Comparative analysis of the regulation of rovA from the pathogenic yersiniae. H-NS Yersinia enterocolitica
17569663 Repression by binding of H-NS within the transcription unit. H-NS Escherichia coli K-12
1756720 Mutations in TrpI binding site II that differentially affect activation of the trpBA promoter of Pseudomonas aeruginosa. TrpI Pseudomonas aeruginosa
17557847 Sinorhizobium meliloti fur-like (Mur) protein binds a fur box-like sequence present in the mntA promoter in a manganese-responsive manner. Mur Sinorhizobium meliloti
17557828 Staphylococcus aureus ArcR controls expression of the arginine deiminase operon. ArcR Staphylococcus aureus
17545281 Protein modulator of multidrug efflux gene expression in Pseudomonas aeruginosa. MexR Pseudomonas aeruginosa
17526837 The response regulator ComE in Streptococcus mutans functions both as a transcription activator of mutacin production and repressor of CSP biosynthesis. ComE Streptococcus pneumoniae
17526710 The two-component regulatory system senX3-regX3 regulates phosphate-dependent gene expression in Mycobacterium smegmatis. RegX3 Mycobacterium smegmatis
17522054 The N-terminal arm of the Helicobacter pylori Ni2+-dependent transcription factor NikR is required for specific DNA binding. NikR Helicobacter pylori
17513475 Identification of a novel streptococcal gene cassette mediating SOS mutagenesis in Streptococcus uberis. HdiR Streptococcus uberis
17513473 Phosphorylated AbsA2 negatively regulates antibiotic production in Streptomyces coelicolor through interactions with pathway-specific regulatory gene promoters. AbsA2 Streptomyces coelicolor
17513468 PdhR (pyruvate dehydrogenase complex regulator) controls the respiratory electron transport system in Escherichia coli. PdhR Escherichia coli
17510253 CodY-affected transcriptional gene expression of Streptococcus pyogenes during growth in human blood. CodY Streptococcus pyogenes
17506333 Refinement of the Xanthomonas campestris pv. vesicatoria hrpD and hrpE operon structure. HrpX Xanthomonas campestris pv. vesicatoria
17501920 The quorum sensing regulator HapR downregulates the expression of the virulence gene transcription factor AphA in Vibrio cholerae by antagonizing Lrp- and VpsR-mediated activation. VpsR Vibrio Cholera
17498746 Optimization of the palindromic order of the TtgR operator enhances binding cooperativity. TtgR Pseudomonas putida
17496102 Target genes and DNA-binding sites of the response regulator PhoR from Corynebacterium glutamicum. PhoR Corynebacterium glutamicum
17496078 Transcriptional regulation of the virR operon of the intracellular pathogen Rhodococcus equi. VirR Rhodococcus equi
17488720 Molecular and structural characterization of the PezAT chromosomal toxin-antitoxin system of the human pathogen Streptococcus pneumoniae. PezA Streptococcus pneumoniae
17483938 FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum. FarR Corynebacterium glutamicum
17483233 Proteomic identification of a novel Anaplasma phagocytophilum DNA binding protein that regulates a putative transcription factor. ApxR Anaplasma phagocytophilum
17483226 Delineation of the Salmonella enterica serovar Typhimurium HilA regulon through genome-wide location and transcript analysis. HilA Salmonella enterica Serovar Typhimurium
17482209 The transcriptional repressor TtgV recognizes a complex operator as a tetramer and induces convex DNA bending. TtgV Pseudomonas putida
17470804 Combinatorial regulation of genes essential for Myxococcus xanthus development involves a response regulator and a LysR-type regulator. FruA Myxococcus xanthus
17468244 A single, specific thymine mutation in the ComK-binding site severely decreases binding and transcription activation by the competence transcription factor ComK of Bacillus subtilis. ComK Bacillus subtilis
17468243 Genomic SELEX search for target promoters under the control of the PhoQP-RstBA signal relay cascade. RstA Escherichia coli
17464068 Regulation and characterization of rot transcription in Staphylococcus aureus. Rot Staphylococcus aureus
17464064 The Escherichia coli yhjA gene, encoding a predicted cytochrome c peroxidase, is regulated by FNR and OxyR. FNR, OxyR E. Coli
17462015 The Pseudomonas putida Crc global regulator is an RNA binding protein that inhibits translation of the AlkS transcriptional regulator. Crc Pseudomonas putida
17462009 Telomere resolution by Borrelia burgdorferi ResT through the collaborative efforts of tethered DNA binding domains. ResT Borrelia burgdorferi
17449618 The NsrR regulon of Escherichia coli K-12 includes genes encoding the hybrid cluster protein and the periplasmic, respiratory nitrite reductase. NsrR Escherichia coli K-12
17449616 Regulation of the Pseudomonas aeruginosa quorum-sensing regulator VqsR. LasR Pseudomonas aeruginosa
17438022 The HlyU protein is a positive regulator of rtxA1, a gene responsible for cytotoxicity and virulence in the human pathogen Vibrio vulnificus.
17434533 AfsR recruits RNA polymerase to the afsS promoter: a model for transcriptional activation by SARPs. AfsR Streptomyces coelicolor A3(2)
17416659 The zinc-responsive regulator Zur controls a zinc uptake system and some ribosomal proteins in Streptomyces coelicolor A3(2). Zur Streptomyces coelicolor
17412387 Single independent operator sites are involved in the genetic switch of the Lactobacillus delbrueckii bacteriophage mv4. Rep Lactobacillus casei
17400767 PsrA, the Pseudomonas sigma regulator, controls regulators of epiphytic fitness, quorum-sensing signals, and plant interactions in Pseudomonas syringae pv. tomato strain DC3000. PsrA Pseudomonas syringae pv. tomato strain DC3000
17400743 Analysis of LuxR regulon gene expression during quorum sensing in Vibrio fischeri. LuxR / LexA Vibrio fischeri
17400736 Zinc-responsive regulation of alternative ribosomal protein genes in Streptomyces coelicolor involves zur and sigmaR. Zur Streptomyces coelicolor
17384071 Effector-stimulated single molecule protein-DNA interactions of a quorum-sensing system in Sinorhizobium meliloti. ExpR Sinorhizobium meliloti
17379719 Molecular characterization of the Fur protein of Listeria monocytogenes. Fur Vibrio salmonicida
17376086 The quorum-sensing transcription factor TraR decodes its DNA binding site by direct contacts with DNA bases and by detection of DNA flexibility. TraR Agrobacterium tumefaciens C58
17376070 The two faces of Janus: virulence gene regulation by CovR/S in group A streptococci. CovR group A streptococcus
17369302 Transcription activation mediated by a cyclic AMP receptor protein from Thermus thermophilus HB8. CRP Thermus thermophilus HB8
17355989 Bioinformatic prediction and experimental verification of Fur-regulated genes in the extreme acidophile Acidithiobacillus ferrooxidans. Fur Acidithiobacillus ferrooxidans
17354605 [Point mutations in tox promoter/operator and diphtheria toxin repressor (DTXR) gene associated with the level of toxin production by Corynebacterium diphtheriae strains isolated in Belarus]. DtxR Corynebacterium diphtheriae
17351037 Regulation of hydrogen peroxide-dependent gene expression in Rhodobacter sphaeroides: regulatory functions of OxyR. OxyR Rhodobacter sphaeroides
17337587 A pair of highly conserved two-component systems participates in the regulation of the hypervariable FIR proteins in different Legionella species. CpxR Legionella pneumophila
17337579 HpdR is a transcriptional activator of Sinorhizobium meliloti hpdA, which encodes a herbicide-targeted 4-hydroxyphenylpyruvate dioxygenase. HpdR Sinorhizobium meliloti
17322317 Regulators of the Bacillus subtilis cydABCD operon: identification of a negative regulator, CcpA, and a positive regulator, ResD. CcpA Bacillus subtilis
17322190 Regulation of the kduID operon of Bacillus subtilis by the KdgR repressor and the ccpA gene: identification of two KdgR-binding sites within the kdgR-kduI intergenic region. KdgR Bacillus subtilis
17322186 The Bacillus subtilis NatK-NatR two-component system regulates expression of the natAB operon encoding an ABC transporter for sodium ion extrusion. NatR Bacillus subtilis
17307842 H-NS antagonism in Shigella flexneri by VirB, a virulence gene transcription regulator that is closely related to plasmid partition factors. VirB Shigella flexneri
17302820 Characterization of relA and codY mutants of Listeria monocytogenes: identification of the CodY regulon and its role in virulence. CodY Listeria monocytogenes
17293426 The DeoR-type regulator SugR represses expression of ptsG in Corynebacterium glutamicum. SugR Corynebacterium glutamicum
17293415 Contributions of [4Fe-4S]-FNR and integration host factor to fnr transcriptional regulation. IHF Escherichia coli str. K-12 substr. MG1655
17291009 Characterization of the Helicobacter pylori NikR-P(ureA) DNA interaction: metal ion requirements and sequence specificity. NikR Helicobacter pylori
17277059 The transcriptional regulators NorG and MgrA modulate resistance to both quinolones and beta-lactams in Staphylococcus aureus. NorG / MgrA Staphylococcus aureus
17261178 The small FNR regulon of Neisseria gonorrhoeae: comparison with the larger Escherichia coli FNR regulon and interaction with the NarQ-NarP regulon. FNR Neisseria gonorrhoeae
17257267 Transcriptional regulation of the desferrioxamine gene cluster of Streptomyces coelicolor is mediated by binding of DmdR1 to an iron box in the promoter of the desA gene. DmdR1 Streptomyces coelicolor
17244194 Bacterial sensing of and resistance to gold salts. GolS Salmonella
17238923 A PerR-regulated metal transporter (PmtA) is an interface between oxidative stress and metal homeostasis in Streptococcus pyogenes. AdcR Streptococcus pyogenes
17237173 SOS regulation of the type III secretion system of enteropathogenic Escherichia coli. LexA Escherichia coli
17237166 Positive regulation of fur gene expression via direct interaction of fur in a pathogenic bacterium, Vibrio vulnificus. Fur Vibrio vulnificus
17234887 Multiple small RNAs act additively to integrate sensory information and control quorum sensing in Vibrio harveyi. sigma54 Vibrio cholerae
17233899 Integration of regulatory signals through involvement of multiple global regulators: control of the Escherichia coli gltBDF operon by Lrp, IHF, Crp, and ArgR. Crp Mycobacterium smegmatis
17233828 Structural basis for operator and antirepressor recognition by Myxococcus xanthus CarA repressor. CarA Myxococcus xanthus
17220228 The HP0165-HP0166 two-component system (ArsRS) regulates acid-induced expression of HP1186 alpha-carbonic anhydrase in Helicobacter pylori by activating the pH-dependent promoter. ArsR Helicobacter pylori
17217960 Catabolism of phenylalanine by Pseudomonas putida: the NtrC-family PhhR regulator binds to two sites upstream from the phhA gene and stimulates transcription with sigma70. PhhR, IHF Pseudomonas putida
17209026 The novel transcription factor SgrR coordinates the response to glucose-phosphate stress. SgrR Escherichia coli K-12
17186376 How we learnt about iron acquisition in Pseudomonas aeruginosa: a series of very fortunate events. Fur Pseudomonas aeruginosa
17185537 The dimeric repressor SoxR binds cooperatively to the promoter(s) regulating expression of the sulfur oxidation (sox) operon of Pseudaminobacter salicylatoxidans KCT001. SoxR Pseudaminobacter salicylatoxidans KCT001
17183218 Carbon catabolite repression of sucrose utilization in Staphylococcus xylosus: catabolite control protein CcpA ensures glucose preference and autoregulatory limitation of sucrose utilization. ScrR Staphylococcus xylosus
17183215 Transcriptome analysis of temporal regulation of carbon metabolism by CcpA in Bacillus subtilis reveals additional target genes. CcpA Bacillus subtilis
17183211 RamA, the transcriptional regulator of acetate metabolism in Corynebacterium glutamicum, is subject to negative autoregulation. RamA Corynebacterium glutamicum
17181783 Regulation of tylosin production: role of a TylP-interactive ligand. TylP Streptomyces fradiae
17172347 The Pseudomonas quorum-sensing regulator RsaL belongs to the tetrahelical superclass of H-T-H proteins. RsaL Pseudomonas aeruginosa
17166222 Regulation of the expression of the CmeABC efflux pump in Campylobacter jejuni: identification of a point mutation abolishing the binding of the CmeR repressor in an in vitro-selected multidrug-resistant mutant. CmeR Campylobacter jejuni
17164287 Transcription factor distribution in Escherichia coli: studies with FNR protein. FNR Escherichia coli
17159211 Involvement of the arginine repressor in lysine biosynthesis of Thermus thermophilus. ArgR Thermus thermophilus
17159200 Characterization of DNA-binding specificity and analysis of binding sites of the Pseudomonas aeruginosa global regulator, Vfr, a homologue of the Escherichia coli cAMP receptor protein. Vfr Pseudomonas aeruginosa
17158660 Dual negative control of spx transcription initiation from the P3 promoter by repressors PerR and YodB in Bacillus subtilis. PerR Bacillus subtilis
17146667 Identification and characterization of two uvrA genes of Xanthomonas axonopodis pathovar citri. LexA Xanthomonas axonopodis pathovar citri
17143269 CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator. CsoR Mycobacterium tuberculosis
17142383 A two-component system regulates the expression of an ABC transporter for xylo-oligosaccharides in Geobacillus stearothermophilus. XynC Geobacillus stearothermophilus
17129387 CcpA affects expression of the groESL and dnaK operons in Lactobacillus plantarum. CcpA Lactobacillus plantarum
17114251 RamB, the transcriptional regulator of acetate metabolism in Corynebacterium glutamicum, is subject to regulation by RamA and RamB. RamB Corynebacterium glutamicum
17107553 OxyR regulated the expression of two major catalases, KatA and KatB, along with peroxiredoxin, AhpC in Pseudomonas putida. OxyR Pseudomonas putida
17101656 Iron-responsive repression of urease expression in Helicobacter hepaticus is mediated by the transcriptional regulator Fur. Fur Helicobacter hepaticus
17098899 Global analysis of the Mycobacterium tuberculosis Zur (FurB) regulon. Zur Mycobacterium tuberculosis
17087775 The symbiosis regulator rscS controls the syp gene locus, biofilm formation and symbiotic aggregation by Vibrio fischeri. RscS Vibrio Fischeri
17086994 [Regulation of nitrogen metabolism in gram-positive bacteria]. TnrA Mycobacterium smegmatis
17085555 Complete and SOS-mediated response of Staphylococcus aureus to the antibiotic ciprofloxacin. LexA Staphylococcus aureus
17083468 MvfR, a key Pseudomonas aeruginosa pathogenicity LTTR-class regulatory protein, has dual ligands. MvfR Pseudomonas aeruginosa
17081194 The GacA global regulator of Vibrio fischeri is required for normal host tissue responses that limit subsequent bacterial colonization. GacA Vibrio Fischeri
17074075 RovM, a novel LysR-type regulator of the virulence activator gene rovA, controls cell invasion, virulence and motility of Yersinia pseudotuberculosis. RovM Yersinia pseudotuberculosis
17068078 Non-canonical CRP sites control competence regulons in Escherichia coli and many other gamma-proteobacteria. CRP/Sxy H. influenzae
17046018 Characterization of MobR, the 3-hydroxybenzoate-responsive transcriptional regulator for the 3-hydroxybenzoate hydroxylase gene of Comamonas testosteroni KH122-3s. MobR Comamonas testosteroni KH122-3s
17041048 NrrA directly regulates expression of hetR during heterocyst differentiation in the cyanobacterium Anabaena sp. strain PCC 7120. NrrA Anabaena sp. strain PCC 7120
17041045 Role of Pseudomonas aeruginosa dinB-encoded DNA polymerase IV in mutagenesis. LexA Pseudomonas aeruginosa
17030579 Helicobacter pylori HP1512 is a nickel-responsive NikR-regulated outer membrane protein. NikR Helicobacter pylori
17028278 Overlapping and specialized functions of the molybdenum-dependent regulators MopA and MopB in Rhodobacter capsulatus. MopB Rhodobacter capsulatus
17028276 nalD encodes a second repressor of the mexAB-oprM multidrug efflux operon of Pseudomonas aeruginosa. NalD Pseudomonas aeruginosa
17028270 Time-resolved determination of the CcpA regulon of Lactococcus lactis subsp. cremoris MG1363. CcpA Lactococcus lactis
17015649 Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. LexA Pseudomonas aeruginosa
17015456 NikR mediates nickel-responsive transcriptional repression of the Helicobacter pylori outer membrane proteins FecA3 (HP1400) and FrpB4 (HP1512). NikR Helicobacter pylori
17015436 The Vibrio harveyi quorum-sensing system uses shared regulatory components to discriminate between multiple autoinducers. Review Vibrio Harveyi
17012397 The ColRS two-component system regulates membrane functions and protects Pseudomonas putida against phenol. ColR Pseudomonas putida
17005983 Dual regulation of a polyethylene glycol degradative operon by AraC-type and GalR-type regulators in Sphingopyxis macrogoltabida strain 103. PegR Sphingopyxis macrogoltabida strain 103
16997971 In silico prediction and functional validation of sigma28-regulated genes in Chlamydia and Escherichia coli. sigma-28 Chlamydia trachomatis
16997962 CovR activation of the dipeptide permease promoter (PdppA) in Group A Streptococcus. CovR Streptococcus pyogenes
16997959 The cation-responsive protein NhaR of Escherichia coli activates pgaABCD transcription, required for production of the biofilm adhesin poly-beta-1,6-N-acetyl-D-glucosamine. NhaR E. coli K12
16997957 Pip, a novel activator of phenazine biosynthesis in Pseudomonas chlororaphis PCL1391. Pip Pseudomonas chlororaphis PCL1391
16995897 Positive regulation of Bacillus subtilis ackA by CodY and CcpA: establishing a potential hierarchy in carbon flow. CodY Bacillus subtilis
16988238 The transcriptional regulator RovS controls the attachment of Streptococcus agalactiae to human epithelial cells and the expression of virulence genes. RovS Streptococcus agalactiae
16980498 Dual role of the PhoP approximately P response regulator: Bacillus amyloliquefaciens FZB45 phytase gene transcription is directed by positive and negative interactions with the phyC promoter. PhoP Bacillus amyloliquefaciens FZB45
16980496 Rem, a new transcriptional activator of motility and chemotaxis in Sinorhizobium meliloti. Rem Sinorhizobium meliloti
16971386 Transcriptional regulatory cascade for elastase production in Vibrio vulnificus: LuxO activates luxT expression and LuxT represses smcR expression. LuxO/LuxT Vibrio vulnificus
16963575 Unraveling the regulatory network in Streptococcus pyogenes: the global response regulator CovR represses rivR directly. CovR Streptococcus pyogenes
16956379 The Campylobacter jejuni PhosS/PhosR operon represents a non-classical phosphate-sensitive two-component system. PhosR Campylobacter jejuni
16954205 Coordinated regulation of the Neisseria gonorrhoeae-truncated denitrification pathway by the nitric oxide-sensitive repressor, NsrR, and nitrite-insensitive NarQ-NarP. NsrR Neisseria gonorrhoeae
16952938 The AlgT-dependent transcriptional regulator AmrZ (AlgZ) inhibits flagellum biosynthesis in mucoid, nonmotile Pseudomonas aeruginosa cystic fibrosis isolates. AlgT Pseudomonas aeruginosa
16950922 The Streptomyces NrdR transcriptional regulator is a Zn ribbon/ATP cone protein that binds to the promoter regions of class Ia and class II ribonucleotide reductase operons. NrdR Streptomyces coelicolor
16946269 Regulation of the expression of whiB1 in Mycobacterium tuberculosis: role of cAMP receptor protein. CRP Mycobacterium tuberculosis
1694528 Transcriptional regulation of comC: evidence for a competence-specific transcription factor in Bacillus subtilis. CTF Bacillus subtilis
16936021 Specific binding of the Xanthomonas campestris pv. vesicatoria AraC-type transcriptional activator HrpX to plant-inducible promoter boxes. HrpX Xanthomonas campestris pv. vesicatoria
16936015 The Escherichia coli K-12 NarL and NarP proteins insulate the nrf promoter from the effects of integration host factor. IHF Escherichia coli K-12
16925562 The bacterial chromosome segregation protein Spo0J spreads along DNA from parS nucleation sites. Spo0J Bacillus subtilis
16925552 rag genes: novel components of the RamR regulon that trigger morphological differentiation in Streptomyces coelicolor. RamR Streptomyces coelicolor
16923887 Control of the Streptomyces Subtilisin inhibitor gene by AdpA in the A-factor regulatory cascade in Streptomyces griseus. AdpA Streptomyces griseus
16897562 Insights into the LexA regulon of Thermotogales. LexA Petrotoga miotherma
16894339 Sensing by bacterial regulatory systems in host and non-host environments. PhoP various
1688844 Nucleotide sequencing and characterization of Pseudomonas putida catR: a positive regulator of the catBC operon is a member of the LysR family. CatR Pseudomonas putida
16885436 The GrlR-GrlA regulatory system coordinately controls the expression of flagellar and LEE-encoded type III protein secretion systems in enterohemorrhagic Escherichia coli. GrlA E. Coli
16861804 Characterization of copper-inducible promoters regulated by CpxA/CpxR in Escherichia coli. CpxR Escherichia coli K-12
16855242 Mutational analysis of the promoter recognized by Chlamydia and Escherichia coli sigma(28) RNA polymerase. sigma-28 Chlamydia trachomatis
16855231 Diverse flavonoids stimulate NodD1 binding to nod gene promoters in Sinorhizobium meliloti. NodD1 Sinorhizobium meliloti
16849788 Transcriptional regulation of the fad regulon genes of Escherichia coli by ArcA. ArcA Escherichia coli
16844243 Involvement of LuxR, a quorum sensing regulator in Vibrio harveyi, in the promotion of metabolic genes: argA, purM, lysE and rluA. LuxR Vibrio harveyi
16842348 Catabolite repression of the citST two-component system in Bacillus subtilis. CCR Bacillus subtilis
16840531 A LexA-related protein regulates redox-sensitive expression of the cyanobacterial RNA helicase, crhR. LexA Synechocystis
16838789 CorR regulates multiple components of virulence in Pseudomonas syringae pv. tomato DC3000. CorR Pseudomonas
16825793 Mechanism of CcpA-mediated glucose repression of the resABCDE operon of Bacillus subtilis. CcpA Bacillus subtilis
16824106 IscR acts as an activator in response to oxidative stress for the suf operon encoding Fe-S assembly proteins. IscR Escherichia coli
16822857 Prediction of CsrA-regulating small RNAs in bacteria and their experimental verification in Vibrio fischeri. Vibrio Fischeri
16816188 Regulation of the Myxococcus xanthus C-signal-dependent Omega4400 promoter by the essential developmental protein FruA. FruA Myxococcus xanthus
16816187 Regulation of LiaRS-dependent gene expression in bacillus subtilis: identification of inhibitor proteins, regulator binding sites, and target genes of a conserved cell envelope stress-sensing two-component system. LiaR Bacillus subtilis
16799864 Interaction of FurA from Anabaena sp. PCC 7120 with DNA: a reducing environment and the presence of Mn(2+) are positive effectors in the binding to isiB and furA promoters. FurA Anabaena sp. PCC 7120
16788190 Coregulation by phenylacetyl-coenzyme A-responsive PaaX integrates control of the upper and lower pathways for catabolism of styrene by Pseudomonas sp. strain Y2. PaaX1 Pseudomonas sp. strain Y2
16788178 Cross-regulation of biphenyl- and salicylate-catabolic genes by two regulatory systems in Pseudomonas pseudoalcaligenes KF707. BphR2 Pseudomonas aeruginosa
16781475 In vitro selection of DNA binding sites for transcription factor, PhaR, from Paracoccus denitrificans using genetic library on microbeads and flow cytometry. PhaR Paracoccus denitrificans
1675210 Studies of the Bradyrhizobium japonicum nodD1 promoter: a repeated structure for the nod box. NodD1 Bradyrhizobium japonicum
16735731 Mutation analysis of the Pseudomonas aeruginosa mvfR and pqsABCDE gene promoters demonstrates complex quorum-sensing circuitry. LasR, RhlR Pseudomonas aeruginosa
16717279 Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria. PhoB Sinorhizobium meliloti
16698104 Application of global analysis techniques to Corynebacterium glutamicum: new insights into nitrogen regulation. AmtR Corynebacterium glutamicum
16684113 Identification of novel HrpXo regulons preceded by two cis-acting elements, a plant-inducible promoter box and a -10 box-like sequence, from the genome database of Xanthomonas oryzae pv. oryzae. HrpX Xanthomonas oryzae pv. oryzae
16677314 IscR-dependent gene expression links iron-sulphur cluster assembly to the control of O2-regulated genes in Escherichia coli. IscR Escherichia coli
16672620 Role of the Fur regulon in iron transport in Bacillus subtilis. Fur Bacillus subtilis
16672598 Characterization of the ArsRS regulon of Helicobacter pylori, involved in acid adaptation. ArsR Helicobacter pylori G27
1665196 Environmentally regulated algD promoter is responsive to the cAMP receptor protein in Escherichia coli. CRP Pseudomonas aeruginosa
16630248 Global analysis of iron assimilation and fur regulation in Yersinia pestis. Fur Yersinia pestis
16622059 Transcriptional regulation of the macs1-fadD1 operon encoding two acyl-CoA synthases involved in the physiological differentiation of Streptomyces coelicolor. AcsR Streptomyces coelicolor
16621822 Characterization of the transcriptional activators SalA and SyrF, Which are required for syringomycin and syringopeptin production by Pseudomonas syringae pv. syringae. SalA Pseudomonas syringae pv. syringae.
16621813 In vitro and in vivo analysis of the role of PrrA in Rhodobacter sphaeroides 2.4.1 hemA gene expression. PrrA Rhodobacter sphaeroides 2.4.1
16617375 The MogR transcriptional repressor regulates nonhierarchal expression of flagellar motility genes and virulence in Listeria monocytogenes. MogR Listeria monocytogenes
16607032 Use of bacterial quorum-sensing components to regulate gene expression in plants. TraR Agrobacterium tumefaciens
16585752 The DtxR regulon of Corynebacterium glutamicum. DtxR Corynebacterium glutamicum
16585740 DNA microarray and proteomic analyses of the RpoS regulon in Geobacter sulfurreducens. RpoS
16573699 Coactivation of Vibrio vulnificus putAP operon by cAMP receptor protein and PutR through cooperative binding to overlapping sites. PutR Vibrio vulnificus
16553888 Nur, a nickel-responsive regulator of the Fur family, regulates superoxide dismutases and nickel transport in Streptomyces coelicolor. Nur Streptomyces coelicolor
16553883 The toxbox: specific DNA sequence requirements for activation of Vibrio cholerae virulence genes by ToxT. ToxT Vibrio cholerae
16553865 Effect of the crp mutation on the utilization of transferrin-bound iron by Vibrio vulnificus. CRP Vibrio vulnificus
16553856 Analysis of mutations that alter HO sensing and transcription regulation properties of a global peroxide regulator OxyR in Xanthomonas campestris pv. phaseoli.
16553827 Presence of NAD+-specific glyceraldehyde-3-phosphate dehydrogenase and CcpA-dependent transcription of its gene in the ruminal bacterium Streptococcus bovis. CcpA Streptococcus bovis
16549674 Identification of the Acidobacterium capsulatum LexA box reveals a lateral acquisition of the Alphaproteobacteria lexA gene. LexA Acidobacterium capsulatum
16549659 Identification and characterization of an iron-regulated gene, chtA, required for the utilization of the xenosiderophores aerobactin, rhizobactin 1021 and schizokinen by Pseudomonas aeruginosa. Fur Pseudomonas aeruginosa PAO1
16547051 The response regulator CroR modulates expression of the secreted stress-induced SalB protein in Enterococcus faecalis. CroR Enterococcus faecalis
16547045 Cross-regulation of the Bacillus subtilis glnRA and tnrA genes provides evidence for DNA binding site discrimination by GlnR and TnrA. GlnR Bacillus subtilis
16547043 Identification of RamA, a novel LuxR-type transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum. RamA Corynebacterium glutamicum
16547035 Effect of Neisseria meningitidis fur mutations on global control of gene transcription. Fur Neisseria meningitidis
16545946 Feedback regulation of doxorubicin biosynthesis in Streptomyces peucetius. DnrO Streptomyces peucetius
16528104 The Rhizobium etli sigma70 (SigA) factor recognizes a lax consensus promoter. SigA Rhizobium etli
16528102 Structures of omega repressors bound to direct and inverted DNA repeats explain modulation of transcription. Omega Streptococcus pyogenes
16517638 Conservation of the Pho regulon in Pseudomonas fluorescens Pf0-1. PhoB Pseudomonas fluorescens Pf0-1
16517618 CatM regulation of the benABCDE operon: functional divergence of two LysR-type paralogs in Acinetobacter baylyi ADP1. CatM Acinetobacter baylyi ADP1
16515846 Transcriptional organization and regulation of the Vibrio anguillarum heme uptake gene cluster. Fur Vibrio anguillarum
16513733 Mga is sufficient to activate transcription in vitro of sof-sfbX and other Mga-regulated virulence genes in the group A Streptococcus. Mga Streptococcus pyogenes
1649820 Functional analysis of the Pseudomonas putida regulatory protein CatR: transcriptional studies and determination of the CatR DNA-binding site by hydroxyl-radical footprinting. CatR Pseudomonas putida
16491025 Regulation of pho regulon gene expression by the carbon control protein A, CcpA, in Bacillus subtilis. CcpA Bacillus subtilis
16489762 In vitro characterization of a bacterial manganese uptake regulator of the fur superfamily. Fur Rhizobium leguminosarum
16484201 Transcription Profiling of the mgrA Regulon in Staphylococcus aureus. mgrA Staphylococcus aureus
16484186 Involvement of the HP0165-HP0166 two-component system in expression of some acidic-pH-upregulated genes of Helicobacter pylori. HP0166 Helicobacter pylori
16469701 A three-protein signaling pathway governing immunity to a bacterial cannibalism toxin. SdpR Bacillus subtilis
16469103 The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum. DtxR Corynebacterium glutamicum
16452424 Spo0A-dependent activation of an extended -10 region promoter in Bacillus subtilis. Spo0A Bacillus Subtilis
16452408 CcpA causes repression of the phoPR promoter through a novel transcription start site, P(A6). PhoP Bacillus subtilis
1644760 NosR, a membrane-bound regulatory component necessary for expression of nitrous oxide reductase in denitrifying Pseudomonas stutzeri. NosR Pseudomonas stutzeri
16428760 PsrA is a positive transcriptional regulator of the type III secretion system in Pseudomonas aeruginosa. PsrA Pseudomonas aeruginosa
16428414 The Fnr regulon of Bacillus subtilis. Fnr Bacillus subtilis
16428403 Regulation of the glucosyltransferase (gtfBC) operon by CovR in Streptococcus mutans. CovR Streptococcus mutans
16428398 Characterization of cis-acting sites controlling arginine deiminase gene expression in Streptococcus gordonii. ArcR Streptococcus gordonii
16428395 Arginine-dependent gene regulation via the ArgR repressor is species specific in chlamydia. ArgR Chlamydia
16428387 ohrR and ohr are the primary sensor/regulator and protective genes against organic hydroperoxide stress in Agrobacterium tumefaciens. OhrR Agrobacterium tumefaciens
16417491 Specificity of FNR-type regulators in Paracoccus denitrificans. NnrR Paracoccus denitrificans
16407274 Effector-repressor interactions, binding of a single effector molecule to the operator-bound TtgR homodimer mediates derepression. TtgR Pseudomonas putida
16407127 ChxR is a transcriptional activator in Chlamydia. ChxR Chlamydia trachomatis
16404569 Global gene regulation in Yersinia enterocolitica: effect of FliA on the expression levels of flagellar and plasmid-encoded virulence genes. FliA Yersinia enterocolitica
1640456 Arginine regulon of Escherichia coli K-12. A study of repressor-operator interactions and of in vitro binding affinities versus in vivo repression. ArgR Escherichia coli K-12
16390453 Activity of purified QscR, a Pseudomonas aeruginosa orphan quorum-sensing transcription factor. QscR Pseudomonas aeruginosa
16385073 The quorum-sensing negative regulator RsaL of Pseudomonas aeruginosa binds to the lasI promoter. RsaL Pseudomonas aeruginosa
16385063 The Iron control element, acting in positive and negative control of iron-regulated Bradyrhizobium japonicum genes, is a target for the Irr protein. Irr Bradyrhizobium japonicum
16385030 Characterization and use of catabolite-repressed promoters from gluconate genes in Corynebacterium glutamicum. GlxR Corynebacterium glutamicum
16385025 Structure, regulation, and putative function of the arginine deiminase system of Streptococcus suis. ArgR Streptococcus suis
16377617 A reassessment of the FNR regulon and transcriptomic analysis of the effects of nitrate, nitrite, NarXL, and NarQP as Escherichia coli K12 adapts from aerobic to anaerobic growth. FNR, NarL E. Coli
16352832 Identification of the syr-syp box in the promoter regions of genes dedicated to syringomycin and syringopeptin production by Pseudomonas syringae pv. syringae B301D. SyrF Pseudomonas syringae pv. syringae B301D
16352831 The Mycobacterium tuberculosis TrcR response regulator represses transcription of the intracellularly expressed Rv1057 gene, encoding a seven-bladed beta-propeller. TrcR Mycobacterium tuberculosis
16343630 The metal- and DNA-binding activities of Helicobacter pylori NikR. NikR Helicobacter pylori
16339952 The manganese-responsive repressor Mur of Rhizobium leguminosarum is a member of the Fur-superfamily that recognizes an unusual operator sequence. Mur Rhizobium leguminosarum
16339949 Transcription and autoregulation of the Rv3134c-devR-devS operon of Mycobacterium tuberculosis. DevR (DosR) Mycobacterium tuberculosis
16339935 Overall control of nitrogen metabolism in Lactococcus lactis by CodY, and possible models for CodY regulation in Firmicutes. CodY Lactococcus lactis
16332855 Transcriptional activation of quinoline degradation operons of Pseudomonas putida 86 by the AraC/XylS-type regulator OxoS and cross-regulation of the PqorM promoter by XylS. OxoS Pseudomonas putida
16321946 The ClgR protein regulates transcription of the clpP operon in Bifidobacterium breve UCC 2003. ClgR Bifidobacterium breve
16321933 Importance of tetramer formation by the nitrogen assimilation control protein for strong repression of glutamate dehydrogenase formation in Klebsiella pneumoniae. NAC Klebsiella pneumoniae
16313621 Fur regulates acid resistance in Shigella flexneri via RyhB and ydeP.
1631071 Specific binding of the diphtheria tox regulatory element DtxR to the tox operator requires divalent heavy metal ions and a 9-base-pair interrupted palindromic sequence. DtxR Corynebacterium diphtheriae
16301522 Studies of the distribution of Escherichia coli cAMP-receptor protein and RNA polymerase along the E. coli chromosome. CRP Escherichia coli
16299312 Iron and fur regulation in Vibrio cholerae and the role of fur in virulence.
16291680 Genome-wide transcriptional analysis of the phosphate starvation stimulon of Bacillus subtilis.
16291676 Comparative analysis of two classes of quorum-sensing signaling systems that control production of extracellular proteins and secondary metabolites in Erwinia carotovora subspecies. ExpR Erwinia carotovora
16291662 Vibrio cholerae ToxT independently activates the divergently transcribed aldA and tagA genes. ToxT Vibrio cholerae
16272381 The LuxR receptor: the sites of interaction with quorum-sensing signals and inhibitors. LuxR Vibrio Fischeri
16269821 Binding of the Bacillus subtilis LexA protein to the SOS operator. LexA Bacillus subtilis
16267313 CadC activates pH-dependent expression of the Vibrio vulnificus cadBA operon at a distance through direct binding to an upstream region. CadC Vibrio vulnificus
16267295 In vitro analysis of protein-operator interactions of the NikR and fur metal-responsive regulators of coregulated genes in Helicobacter pylori. NikR Helicobacter pylori
16267290 Genetic composition of the Bacillus subtilis SOS system. lexA Bacillus subtilis
16264194 Genomic analysis of LexA binding reveals the permissive nature of the Escherichia coli genome and identifies unconventional target sites. LexA Escherichia coli
16257976 Analysis of RovA, a transcriptional regulator of Yersinia pseudotuberculosis virulence that acts through antirepression and direct transcriptional activation. RovA Yersinia pseudotuberculosis
16246368 Structures of Mycobacterium tuberculosis DosR and DosR-DNA complex involved in gene activation during adaptation to hypoxic latency. DosR Mycobacterium tuberculosis
16239520 The nickel-responsive regulator NikR controls activation and repression of gene transcription in Helicobacter pylori. NikR Escherichia coli
16238634 Phosphate limitation induces catalase expression in Sinorhizobium meliloti, Pseudomonas aeruginosa and Agrobacterium tumefaciens. PhoB Pseudomonas aeruginosa
16238629 LexA regulates the bidirectional hydrogenase in the cyanobacterium Synechocystis sp. PCC 6803 as a transcription activator. LexA Synechocystis sp. PCC 6803
16238621 Role of BvgA phosphorylation and DNA binding affinity in control of Bvg-mediated phenotypic phase transition in Bordetella pertussis. BvgA Bordetella pertussis
16237028 Regulation of the pspA virulence factor and essential pcsB murein biosynthetic genes by the phosphorylated VicR (YycF) response regulator in Streptococcus pneumoniae. VicR Streptococcus pneumoniae
16209951 Structure of an OhrR-ohrA operator complex reveals the DNA binding mechanism of the MarR family. OhrR Bacillus subtilis
16199562 Fnr-, NarP- and NarL-dependent regulation of transcription initiation from the Haemophilus influenzae Rd napF (periplasmic nitrate reductase) promoter in Escherichia coli K-12. Fnr, NarP, NarL Haemophilus influenzae
16194241 Regulation of AmtR-controlled gene expression in Corynebacterium glutamicum: mechanism and characterization of the AmtR regulon. AmtR Corynebacterium glutamicum
16194235 PchR-box recognition by the AraC-type regulator PchR of Pseudomonas aeruginosa requires the siderophore pyochelin as an effector. PchR Pseudomonas aeruginosa
16194234 The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate. SsuR Corynebacterium glutamicum
16177315 Acid-induced activation of the urease promoters is mediated directly by the ArsRS two-component system of Helicobacter pylori. ArsR Helicobacter pylori G27
16174772 Binding of the global response regulator protein CovR to the sag promoter of Streptococcus pyogenes reveals a new mode of CovR-DNA interaction. CovR Streptococcus pyogenes
16166551 Regulation of sigL expression by the catabolite control protein CcpA involves a roadblock mechanism in Bacillus subtilis: potential connection between carbon and nitrogen metabolism. CcpA Bacillus subtilis
16166533 Cyclic AMP receptor protein and RhaR synergistically activate transcription from the L-rhamnose-responsive rhaSR promoter in Escherichia coli. CRP Escherichia coli
16166527 The H2O2 stress-responsive regulator PerR positively regulates srfA expression in Bacillus subtilis. PerR Bacillus subtilis
16164554 Transcriptional activation of the pathway-specific regulator of the actinorhodin biosynthetic genes in Streptomyces coelicolor. AtrA Streptomyces coelicolor
16159785 Activation of the phz operon of Pseudomonas fluorescens 2-79 requires the LuxR homolog PhzR, N-(3-OH-Hexanoyl)-L-homoserine lactone produced by the LuxI homolog PhzI, and a cis-acting phz box. PhzR Pseudomonas
16159767 Three chymotrypsin genes are members of the AdpA regulon in the A-factor regulatory cascade in Streptomyces griseus. AdpA Streptomyces griseus
16159761 Mode of action of the Bordetella BvgA protein: transcriptional activation and repression of the Bordetella bronchiseptica bipA promoter. BvgA Bordetella bronchiseptica
16151132 Dual role of response regulator StyR in styrene catabolism regulation. StyR Pseudomonas fluorescens
16135237 Transcriptional regulation of flhDC by QseBC and sigma (FliA) in enterohaemorrhagic Escherichia coli. QseB Escherichia coli
16115199 Systematic search for the Cra-binding promoters using genomic SELEX system. Cra E.coli
16111660 Deduction of upstream sequences of Xanthomonas campestris flagellar genes responding to transcription activation by FleQ. FleQ Xanthomonas campestris pv. campestris
16102913 LexA, a transcription regulator binding in the promoter region of the bidirectional hydrogenase in the cyanobacterium Synechocystis sp. PCC 6803. LexA Synechocystis sp. PCC 6803
16079351 Induction of the SOS regulon of Haemophilus influenzae does not affect phase variation rates at tetranucleotide or dinucleotide repeats. LexA Haemophilus influenzae
16077133 The Leptospira interrogans lexA gene is not autoregulated. LexA Leptospira interrogans
16077104 Transcriptional control by A-factor of strR, the pathway-specific transcriptional activator for streptomycin biosynthesis in Streptomyces griseus. AdpA Streptomyces griseus IFO13350
16075200 The glycolytic genes pfk and pyk from Lactobacillus casei are induced by sugars transported by the phosphoenolpyruvate:sugar phosphotransferase system and repressed by CcpA. CcpA Lactobacillus casei
16045618 NssR, a member of the Crp-Fnr superfamily from Campylobacter jejuni, regulates a nitrosative stress-responsive regulon that includes both a single-domain and a truncated haemoglobin. NssR Campylobacter jejuni
16040607 Identification of a gene involved in polysaccharide export as a transcription target of FruA, an essential factor for Myxococcus xanthus development. FruA Myxococcus xanthus
16040604 The Lactococcus lactis CodY regulon: identification of a conserved cis-regulatory element. CodY Lactococcus lactis
16030231 Expression of canonical SOS genes is not under LexA repression in Bdellovibrio bacteriovorus. LexA Bdellovibrio bacteriovorus
16030210 Bacillus subtilis phosphorylated PhoP: direct activation of the E(sigma)A- and repression of the E(sigma)E-responsive phoB-PS+V promoters during pho response. PhoP Bacillus subtilis
16000781 Identification of a positive transcription regulatory element within the coding region of the nifLA operon in Azotobacter vinelandii. NifA Azotobacter vinelandii
16000245 Identification of an AraC-like regulator gene required for induction of the 78-kDa ferrioxamine B receptor in Vibrio vulnificus.
15995194 ExpR, a LuxR homolog of Erwinia carotovora subsp. carotovora, activates transcription of rsmA, which specifies a global regulatory RNA-binding protein. ExpR Erwinia carotovora subsp. carotovora Ecc71
15978086 The transcriptional activator ClgR controls transcription of genes involved in proteolysis and DNA repair in Corynebacterium glutamicum. ClgR Corynebacterium glutamicum
15978084 Binding sites of VanRB and sigma70 RNA polymerase in the vanB vancomycin resistance operon of Enterococcus faecium BM4524. VanRB VanRB Enterococcus faecium BM4524
15978080 Integration of three signals at the Escherichia coli nrf promoter: a role for Fis protein in catabolite repression. FIS Escherichia coli
15978075 Dual regulation of genes involved in acetoin biosynthesis and motility/biofilm formation by the virulence activator AphA and the acetate-responsive LysR-type regulator AlsR in Vibrio cholerae. AphA Vibrio cholerae
15968080 The Helicobacter pylori CrdRS two-component regulation system (HP1364/HP1365) is required for copper-mediated induction of the copper resistance determinant CrdA. CrdR Helicobacter pylori 26695
15968052 Binding of Pseudomonas aeruginosa AlgZ to sites upstream of the algZ promoter leads to repression of transcription. AlgZ Pseudomonas aeruginosa
15968047 Microarray analysis and motif detection reveal new targets of the Salmonella enterica serovar Typhimurium HilA regulatory protein, including hilA itself. HilA Salmonella enterica serovar Typhimurium
15968046 Regulation of Pseudomonas quinolone signal synthesis in Pseudomonas aeruginosa. LasR, RhlR Pseudomonas aeruginosa
15955530 Clp upregulates transcription of engA gene encoding a virulence factor in Xanthomonas campestris by direct binding to the upstream tandem Clp sites. Clp Xanthomonas campestris
15950121 The PpsR regulator family. PpsR None
15942007 The ferric iron uptake regulator (Fur) from the extreme acidophile Acidithiobacillus ferrooxidans. Fur Acidithiobacillus ferrooxidans
15941987 Binding and transcriptional activation of non-flagellar genes by the Escherichia coli flagellar master regulator FlhD2C2. FlhD2C2 Escherichia coli
15941986 The Bacillus subtilis YdfHI two-component system regulates the transcription of ydfJ, a member of the RND superfamily. YdfI Bacillus subtilis
15937175 A region of Bacillus subtilis CodY protein required for interaction with DNA. CodY Bacillus subtilis
15937158 Transcriptional regulation of the flavohemoglobin gene for aerobic nitric oxide detoxification by the second nitric oxide-responsive regulator of Pseudomonas aeruginosa. RpoN Pseudomonas aeruginosa PAO1
1592820 The Streptomyces glaucescens TcmR protein represses transcription of the divergently oriented tcmR and tcmA genes by binding to an intergenic operator region. TcmR Streptomyces glaucescens
15916606 Elaborate transcription regulation of the Bacillus subtilis ilv-leu operon involved in the biosynthesis of branched-chain amino acids through global regulators of CcpA, CodY and TnrA. CcpA Bacillus subtilis
15908404 Deletion of the ferric uptake regulator Fur impairs the in vitro growth and virulence of Actinobacillus pleuropneumoniae.
15907934 Autorepression of AdpA of the AraC/XylS family, a key transcriptional activator in the A-factor regulatory cascade in Streptomyces griseus. AdpA Streptomyces griseus
15901700 Sulfur amino acid metabolism and its control in Lactococcus lactis IL1403. FhuR Lactococcus lactis IL1403
15901699 Fructose utilization in Lactococcus lactis as a model for low-GC gram-positive bacteria: its regulator, signal, and DNA-binding site. FruR Lactococcus lactis
15901691 Iron-responsive regulation of the Helicobacter pylori iron-cofactored superoxide dismutase SodB is mediated by Fur. Fur Helicobacter pylori
15901683 Vibrio fischeri uses two quorum-sensing systems for the regulation of early and late colonization factors. Vibrio Fischeri
15899403 Novel target genes of PsrA transcriptional regulator of Pseudomonas aeruginosa. PsrA Pseudomonas aeruginosa
15885105 Quantitative interdependence of coeffectors, CcpA and cre in carbon catabolite regulation of Bacillus subtilis. CcpA Bacillus subtilis
15882427 Binding of PhoP to promoters of phosphate-regulated genes in Streptomyces coelicolor: identification of PHO boxes. PhoP Streptomyces coelicolor
15882420 A member of the cAMP receptor protein family of transcription regulators in Mycobacterium tuberculosis is required for virulence in mice and controls transcription of the rpfA gene coding for a resuscitation promoting factor. CRP Mycobacterium tuberculosis
15882414 The CovR response regulator of group A streptococcus (GAS) acts directly to repress its own promoter. CovR Streptococcus pyogenes
15861813 Transcriptional regulation of high pathogenicity island iron uptake genes by YbtA. YbtA Yersinia pestis
15855505 Molecular characterization of MexL, the transcriptional repressor of the mexJK multidrug efflux operon in Pseudomonas aeruginosa. MexL Pseudomonas aeruginosa
15853892 DksA represses ribosomal gene transcription in Pseudomonas aeruginosa by interacting with RNA polymerase on ribosomal promoters. DksA Pseudomonas aeruginosa
15853890 Activation of both acfA and acfD transcription by Vibrio cholerae ToxT requires binding to two centrally located DNA sites in an inverted repeat conformation. ToxT Vibrio cholerae
15849419 DNA-binding protein involved in the regulation of chitinase production in Streptomyces lividans. Cpb1 Streptomyces lividans
15838057 Novel roles of ohrR-ohr in Xanthomonas sensing, metabolism, and physiological adaptive response to lipid hydroperoxide.
15838043 Characterization of enhancer binding by the Vibrio cholerae flagellar regulatory protein FlrC. FlrC Vibrio cholerae
15838033 Characterization of PmfR, the transcriptional activator of the pAO1-borne purU-mabO-folD operon of Arthrobacter nicotinovorans. PmfR Arthrobacter nicotinovorans
15838027 Requirements for Vibrio cholerae HapR binding and transcriptional repression at the hapR promoter are distinct from those at the aphA promoter. HapR Vibrio cholerae
15817787 The H-NS protein represses transcription of the eltAB operon, which encodes heat-labile enterotoxin in enterotoxigenic Escherichia coli, by binding to regions downstream of the promoter. H-NS Escherichia coli
1579469 Upstream binding sequences of the XylR activator protein and integration host factor in the xylS gene promoter region of the Pseudomonas TOL plasmid. XylR Pseudomonas putida
15774873 Effects on promoter activity of base substitutions in the cis-acting regulatory element of HrpXo regulons in Xanthomonas oryzae pv. oryzae. HrpXo Xanthomonas oryzae pv. oryzae
15773988 BvgA functions as both an activator and a repressor to control Bvg phase expression of bipA in Bordetella pertussis. BvgA Bordetella pertussis
15773986 Evidence that Bacillus catabolite control protein CcpA interacts with RNA polymerase to inhibit transcription. CcpA Bacillus subtilis
15769466 A novel CRP-dependent regulon controls expression of competence genes in Haemophilus influenzae. CRP Haemophilus influenzae
15758227 Identification of the DNA-binding site of the Rgg-like regulator LasX within the lactocin S promoter region. LasX Lactobacillus sakei L45
15749710 Interaction between ArgR and AhrC controls regulation of arginine metabolism in Lactococcus lactis. ArgR Lactococcus lactis
15743936 Percolation of the phd repressor-operator interface. Phd Salmonella enterica serovar Typhimurium
15731039 A Vibrio vulnificus type IV pilin contributes to biofilm formation, adherence to epithelial cells, and virulence.
15728904 CmeR functions as a transcriptional repressor for the multidrug efflux pump CmeABC in Campylobacter jejuni. CmeR Campylobacter jejuni
15720562 HspR is a global negative regulator of heat shock gene expression in Deinococcus radiodurans. HspR Deinococcus radiodurans
15720554 Identification of amino acid residues of the Agrobacterium tumefaciens quorum-sensing regulator TraR that are critical for positive control of transcription. TraR Agrobacterium tumefaciens C58
15720552 CcpN (YqzB), a novel regulator for CcpA-independent catabolite repression of Bacillus subtilis gluconeogenic genes. CcpN Bacillus subtilis
15716435 Activation of the vrg6 promoter of Bordetella pertussis by RisA. RisA Bordetella pertussis
15711009 LeuO protein delimits the transcriptionally active and repressive domains on the bacterial chromosome. LeuO, REVIEW
15703297 Dissecting the PhoP regulatory network of Escherichia coli and Salmonella enterica. PhoP E. coli & S. typhimurium
15699208 Genetic and physiological analysis of the major OxyR-regulated katA from Xanthomonas campestris pv. phaseoli. OxyR Xanthomonas campestris pv. phaseoli
15699202 Transcriptional profiling of Helicobacter pylori Fur- and iron-regulated gene expression.
15664197 LexA cleavage is required for CTX prophage induction. LexA Vibrio cholerae
15661014 The svpA-srtB locus of Listeria monocytogenes: fur-mediated iron regulation and effect on virulence. Fur Listeria monocytogenes
15661012 The sigma54-dependent transcriptional activator SfnR regulates the expression of the Pseudomonas putida sfnFG operon responsible for dimethyl sulphone utilization. SfnR Pseudomonas putida
15659676 Functional interactions between the carbon and iron utilization regulators, Crp and Fur, in Escherichia coli. Fur Escherichia coli
15659673 Role of integration host factor in the transcriptional activation of flagellar gene expression in Caulobacter crescentus. IHF Caulobacter crescentus
15659163 Ca2+-dependent expression of the CIRCE regulon in Streptococcus pneumoniae. HrcA Streptococcus pneumoniae
15634675 BzdR, a repressor that controls the anaerobic catabolism of benzoate in Azoarcus sp. CIB, is the first member of a new subfamily of transcriptional regulators. BzdR Azoarcus sp. CIB
15632445 DNA-binding activity of LndI protein and temporal expression of the gene that upregulates landomycin E production in Streptomyces globisporus 1912. LndI Streptomyces globisporus 1912
15632443 Detailed studies of the binding mechanism of the Sinorhizobium meliloti transcriptional activator ExpG to DNA. ExpG Sinorhizobium meliloti
15632442 Campylobacter jejuni gene expression in response to iron limitation and the role of Fur. Fur Campylobacter jejuni
15632300 Activation of SoxR-dependent transcription in Pseudomonas aeruginosa. SoxR Pseudomonas aeruginosa
15629923 Probing direct interactions between CodY and the oppD promoter of Lactococcus lactis. CodY Lactococcus lactis
15629913 Analysis of a DtxR-regulated iron transport and siderophore biosynthesis gene cluster in Corynebacterium diphtheriae. DtxR Corynebacterium diphtheriae
15612930 The PerR regulon in peroxide resistance and virulence of Streptococcus pyogenes. PerR Streptococcus pyogenes
15604457 Differences in LexA regulon structure among Proteobacteria through in vivo assisted comparative genomics. LexA Sinorhizobium meliloti
15601697 Dual transcriptional control of amfTSBA, which regulates the onset of cellular differentiation in Streptomyces griseus. BldD Streptomyces griseus
1560004 Identification of a distantly located regulatory element in the luxD gene required for negative autoregulation of the Vibrio fischeri luxR gene. LuxR Vibrio fischeri
15576789 Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis. Fur Shewanella oneidensis
15569664 Signal-dependent binding of the response regulators PhoP and PmrA to their target promoters in vivo. PhoP, PrmA Salmonella typhimurium
15554966 CovS/CovR of group B streptococcus: a two-component global regulatory system involved in virulence. CovR Streptococcus agalactiae
15547286 Regulation of iron transport in Streptococcus pneumoniae by RitR, an orphan response regulator. RitR Streptococcus pneumoniae
15547275 Effector-mediated interaction of CbbRI and CbbRII regulators with target sequences in Rhodobacter capsulatus. CbbR Rhodobacter capsulatus
15547270 A DNA region recognized by the nitric oxide-responsive transcriptional activator NorR is conserved in beta- and gamma-proteobacteria. NorR Ralstonia eutropha H16
15528665 The Pseudomonas aeruginosa global regulator MvaT specifically binds to the ptxS upstream region and enhances ptxS expression. MvaT Pseudomonas aeruginosa
15528664 Reconstruction of the evolutionary history of the LexA-binding sequence. LexA Fibrobacter succinogenes
15516594 Global transcriptome analysis of the heat shock response of Shewanella oneidensis. RpoN Shewanella oneidensis
15505212 Promoter specificity in Pseudomonas aeruginosa quorum sensing revealed by DNA binding of purified LasR. LasR Pseudomonas aeruginosa PAO1
15494411 Identification of AcnR, a TetR-type repressor of the aconitase gene acn in Corynebacterium glutamicum. AcnR Corynebacterium glutamicum
15491370 The response regulator SsrB activates transcription and binds to a region overlapping OmpR binding sites at Salmonella pathogenicity island 2. SsrB Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
15491369 Integration host factor is involved in transcriptional regulation of the Brucella abortus virB operon. IHF Brucella abortus
15491366 The role of H-NS in silencing F transfer gene expression during entry into stationary phase. H-NS Escherichia coli
15489451 Analysis of promoter elements involved in the transcriptional initiation of RpoS-dependent Borrelia burgdorferi genes. RpoS Borrelia burgdorferi
15489442 The BfeR regulator mediates enterobactin-inducible expression of Bordetella enterobactin utilization genes. BfeA Bordetella pertussis, Bordetella bronchiseptica
15469523 A regulation cascade controls expression of Porphyromonas gingivalis fimbriae via the FimR response regulator. FimR Porphyromonas gingivalis
15466047 Genomic studies with Escherichia coli MelR protein: applications of chromatin immunoprecipitation and microarrays. MelR Escherichia coli
15466037 The transcriptional regulator AlgR controls cyanide production in Pseudomonas aeruginosa. AlgR Pseudomonas aeruginosa
15458417 Widespread distribution of a lexA-regulated DNA damage-inducible multiple gene cassette in the Proteobacteria phylum. LexA Pseudomonas putida
15458403 Novel substitutions in the sigma54-dependent activator DctD that increase dependence on upstream activation sequences or uncouple ATP hydrolysis from transcriptional activation. DctD Sinorhizobium meliloti
15447793 Prediction of DtxR regulon: identification of binding sites and operons controlled by Diphtheria toxin repressor in Corynebacterium diphtheriae. DtxR Corynebacterium diphtheriae
15375149 DNA binding activity of the Escherichia coli nitric oxide sensor NorR suggests a conserved target sequence in diverse proteobacteria. NorR Escherichia coli
15375117 Transcriptional regulation of Vibrio cholerae hemagglutinin/protease by the cyclic AMP receptor protein and RpoS. CRP Vibrio cholerae
15359276 Structure and DNA-binding properties of the cytolysin regulator CylR2 from Enterococcus faecalis. CylR2 Enterococcus faecalis
15351643 Regulation of hem gene expression in Rhodobacter capsulatus by redox and photosystem regulators RegA, CrtJ, FnrL, and AerR. RegA Rhodobacter capsulatus
15345437 Regulation of the N-acyl homoserine lactone-dependent quorum-sensing system in rhizosphere Pseudomonas putida WCS358 and cross-talk with the stationary-phase RpoS sigma factor and the global regulator GacA.
15345406 Molecular characterization of CcpA and involvement of this protein in transcriptional regulation of lactate dehydrogenase and pyruvate formate-lyase in the ruminal bacterium Streptococcus bovis. CcpA Streptococcus bovis
15342575 Two arginine repressors regulate arginine biosynthesis in Lactobacillus plantarum. ArgR Lactobacillus plantarum
15336398 MexZ-mediated regulation of mexXY multidrug efflux pump expression in Pseudomonas aeruginosa by binding on the mexZ-mexX intergenic DNA. MexZ Pseudomonas aeruginosa
15317793 The htx and ptx operons of Pseudomonas stutzeri WM88 are new members of the pho regulon. PhoB Pseudomonas stutzeri WM88
15317771 Identification of AlgR-regulated genes in Pseudomonas aeruginosa by use of microarray analysis. AlgR Pseudomonas aeruginosa
15304477 Light and redox control of photosynthesis gene expression in Bradyrhizobium: dual roles of two PpsR. PpsR Bradyrhizobium
15302931 Listeria monocytogenes regulates flagellar motility gene expression through MogR, a transcriptional repressor required for virulence. MogR Listeria monocytogenes
15292128 Identification of sarV (SA2062), a new transcriptional regulator, is repressed by SarA and MgrA (SA0641) and involved in the regulation of autolysis in Staphylococcus aureus. SarA/MgrA Staphylococcus aureus
15289569 AlgR functions in algC expression and virulence in Pseudomonas syringae pv. syringae. AlgR Pseudomonas
15289557 Characterization of the Bacillus subtilis YxdJ response regulator as the inducer of expression for the cognate ABC transporter YxdLM. YxdJ Bacillus subtilis
15289555 Identification and transcriptional organization of a gene cluster involved in biosynthesis and transport of acinetobactin, a siderophore produced by Acinetobacter baumannii ATCC 19606T. Fur Acinetobacter baumannii ATCC 19606T
15262943 The homogentisate pathway: a central catabolic pathway involved in the degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in Pseudomonas putida. HmgR Pseudomonas putida
15262938 Replication of Enterococcus faecalis pheromone-responding plasmid pAD1: location of the minimal replicon and oriV site and RepA involvement in initiation of replication. RepA Enterococcus faecalis
15256575 FixJ-regulated genes evolved through promoter duplication in Sinorhizobium meliloti. FixJ Sinorhizobium meliloti
15255899 RovA is autoregulated and antagonizes H-NS-mediated silencing of invasin and rovA expression in Yersinia pseudotuberculosis. RovA
15231804 Iron acquisition and regulation in Campylobacter jejuni. Fur Campylobacter jejuni
15231782 Genes regulated by TorR, the trimethylamine oxide response regulator of Shewanella oneidensis. TorR Shewanella oneidensis
15228542 Activation of transcription initiation from a stable RNA promoter by a Fis protein-mediated DNA structural transmission mechanism. Fis Escherichia coli
15228537 Activation of the Bacillus subtilis global regulator CodY by direct interaction with branched-chain amino acids. CodY Bacillus subtilis
15228534 DNA-binding specificity of AdpA, a transcriptional activator in the A-factor regulatory cascade in Streptomyces griseus. AdpA Streptomyces griseus IFO13350
15225309 Vibrio cholerae AphA uses a novel mechanism for virulence gene activation that involves interaction with the LysR-type regulator AphB at the tcpPH promoter. AphA Vibrio cholerae
15225308 Inventory and functional analysis of the large Hrp regulon in Ralstonia solanacearum: identification of novel effector proteins translocated to plant host cells through the type III secretion system. HrpB Ralstonia solanacearum GMI1000
15225304 Function and regulation of the cyanobacterial genes lexA, recA and ruvB: LexA is critical to the survival of cells facing inorganic carbon starvation. LexA Synechocystis PCC6803
15221763 Proteomic analysis of a ferric uptake regulator mutant of Helicobacter pylori: regulation of Helicobacter pylori gene expression by ferric uptake regulator and iron. Fur Helicobacter pylori
15215626 Identification and characterization of two contiguous operons required for aerobactin transport and biosynthesis in Vibrio mimicus. Fur Vibrio mimicus
15210934 Identification of tandem duplicate regulatory small RNAs in Pseudomonas aeruginosa involved in iron homeostasis. Fur Pseudomonas aeruginosa
15205429 Autoinduction of Bacillus subtilis phoPR operon transcription results from enhanced transcription from EsigmaA- and EsigmaE-responsive promoters by phosphorylated PhoP. PhoP Bacillus subtilis
15175299 Transcriptome analysis of the ArgR regulon in Pseudomonas aeruginosa. ArgR Pseudomonas aeruginosa
15175298 The arginine regulatory protein mediates repression by arginine of the operons encoding glutamate synthase and anabolic glutamate dehydrogenase in Pseudomonas aeruginosa. ArgR Pseudomonas aeruginosa
15175288 Characterization and functional analysis of the poxB gene, which encodes pyruvate oxidase in Lactobacillus plantarum. CcpA Lactobacillus plantarum
15163666 The N terminus of Myxococcus xanthus CarA repressor is an autonomously folding domain that mediates physical and functional interactions with both operator DNA and antirepressor protein. CarA Myxococcus xanthus
15159386 Regulation of penicillin G acylase gene expression in Escherichia coli by repressor PaaX and the cAMP-cAMP receptor protein complex. PaaX Escherichia coli
15150239 Transcriptome analysis of Crp-dependent catabolite control of gene expression in Escherichia coli. crp Escherichia coli
15150239 Transcriptome analysis of Crp-dependent catabolite control of gene expression in Escherichia coli. CRP Escherichia coli
15150232 Identification and characterization of glxR, a gene involved in regulation of glyoxylate bypass in Corynebacterium glutamicum.
15150223 Stress response gene regulation in Chlamydia is dependent on HrcA-CIRCE interactions. HrcA Chlamydia trachomatis strain MoPn
15150218 Differential gene expression in response to hydrogen peroxide and the putative PerR regulon of Synechocystis sp. strain PCC 6803. PerR Synechocystis sp. strain PCC 6803
15148310 The ferric uptake regulator (Fur) protein from Bradyrhizobium japonicum is an iron-responsive transcriptional repressor in vitro. Fur Bradyrhizobium japonicum
15140891 Definition of a consensus DNA-binding site for PecS, a global regulator of virulence gene expression in Erwinia chrysanthemi and identification of new members of the PecS regulon. PecS Dickeya dadantii
15133106 The Fur-like protein Mur of Rhizobium leguminosarum is a Mn(2+)-responsive transcriptional regulator. Mur Rhizobium leguminosarum
15130126 Fur functions as an activator and as a repressor of putative virulence genes in Neisseria meningitidis. Fur Neisseria meningitidis
15126487 ClgR, a novel regulator of clp and lon expression in Streptomyces. ClgR Streptomyces coelicolor
15126469 Two separate quorum-sensing systems upregulate transcription of the same ABC transporter in Streptococcus pneumoniae. BlpR Staphylococcus aureus
15126451 TtgV bound to a complex operator site represses transcription of the promoter for the multidrug and solvent extrusion TtgGHI pump. TtgV Pseudomonas putida
15126450 OmpR and LeuO positively regulate the Salmonella enterica serovar Typhi ompS2 porin gene. OmpR, LeuO Salmonella enterica serovar Typhi
15123730 Operator design and mechanism for CarA repressor-mediated down-regulation of the photoinducible carB operon in Myxococcus xanthus. CarA Myxococcus xanthus
15101989 Identification of AbrB-regulated genes involved in biofilm formation by Bacillus subtilis.
15090522 RamB, a novel transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum. RamB Corynebacterium glutamicum
15066853 Vibrio fischeri sigma54 controls motility, biofilm formation, luminescence, and colonization. sigma54 Vibrio Fischeri
15066807 Cloning, deletion, and characterization of PadR, the transcriptional repressor of the phenolic acid decarboxylase-encoding padA gene of Lactobacillus plantarum. PadR Lactobacillus plantarum
15060033 Characterization of the cis-acting regulatory element controlling HrpB-mediated activation of the type III secretion system and effector genes in Ralstonia solanacearum. HrpB Ralstonia solanacearum
15057514 Interaction kinetics of the copper-responsive CopY repressor with the cop promoter of Enterococcus hirae. CopY Enterococcus hirae
15049827 clpC and clpP1P2 gene expression in Corynebacterium glutamicum is controlled by a regulatory network involving the transcriptional regulators ClgR and HspR as well as the ECF sigma factor sigmaH. ClgR Corynebacterium glutamicum
15049824 Mode of action of the TyrR protein: repression and activation of the tyrP promoter of Escherichia coli. TyrR Escherichia coli
1502169 Purification and characterization of the diphtheria toxin repressor. DtxR Corynebacterium diphtheriae
14996803 Regulation of expression of the divergent ulaG and ulaABCDEF operons involved in LaAscorbate dissimilation in Escherichia coli. UlaR Escherichia coli
14993314 Downregulation of the motA gene delays the escape of the obligate predator Bdellovibrio bacteriovorus 109J from bdelloplasts of bacterial prey cells. motA Bdellovibrio bacteriovorus
14973015 Evidence for HrpXo-dependent expression of type II secretory proteins in Xanthomonas oryzae pv. oryzae. HrpXo Xanthomonas oryzae pv. oryzae
14960585 A novel cyanobacterial SmtB/ArsR family repressor regulates the expression of a CPx-ATPase and a metallothionein in response to both Cu(I)/Ag(I) and Zn(II)/Cd(II). BxmR Oscillatoria brevis
14763974 The Pseudomonas aeruginosa RpoS regulon and its relationship to quorum sensing. RpoS Pseudomonas aeruginosa
14762014 Transcriptional regulation of the phoPR operon in Bacillus subtilis. PhoP Bacillus subtilis
14762013 Identification of genes controlled by the essential YycG/YycF two-component system of Staphylococcus aureus. YycF Staphylococcus aureus RN4220
14762010 ArgR and AhrC are both required for regulation of arginine metabolism in Lactococcus lactis. ArgR Lactococcus lactis MG1363
14761997 Molecular characterization of a high-affinity xylobiose transporter of Streptomyces thermoviolaceus OPC-520 and its transcriptional regulation. BxlR Streptomyces thermoviolaceus OPC-520
14741201 Purine and pyrimidine-specific repression of the Escherichia coli carAB operon are functionally and structurally coupled. PurR Escherichia coli
14731281 Application of AgaR repressor and dominant repressor variants for verification of a gene cluster involved in N-acetylgalactosamine metabolism in Escherichia coli K-12. AgaR Escherichia coli
14729687 Reversible acyl-homoserine lactone binding to purified Vibrio fischeri LuxR protein. LuxR Vibrio fischeri
1472055 In vitro interactions of the histone-like protein IHF with the algD promoter, a critical site for control of mucoidy in Pseudomonas aeruginosa. IHF Pseudomonas aeruginosa
14663078 The LysR-type transcriptional regulator CysB controls the repression of hslJ transcription in Escherichia coli. CysB Escherichia coli
14663075 Two MerR homologues that affect copper induction of the Bacillus subtilis copZA operon. CueR Bacillus subtilis
14652736 LexA-binding sequences in Gram-positive and cyanobacteria are closely related. LexA Anabaena sp. strain PCC7120
14651647 The Spo0A regulon of Bacillus subtilis. Spo0A Bacillus subtilis
14645293 Control of Pseudomonas aeruginosa algZ expression by the alternative sigma factor AlgT. AlgT Pseudomonas aeruginosa
14645281 GacA regulates symbiotic colonization traits of Vibrio fischeri and facilitates a beneficial association with an animal host. GacA Vibrio Fischeri
14641576 Characterization of a new solvent-responsive gene locus in Pseudomonas putida F1 and its functionalization as a versatile biosensor. SepR Pseudomonas putida
14627811 Solution structure and DNA binding of the effector domain from the global regulator PrrA (RegA) from Rhodobacter sphaeroides: insights into DNA binding specificity. RegA Rhodobacter sphaeroides
14622419 An anti-repression Fur operator upstream of the promoter is required for iron-mediated transcriptional autoregulation in Helicobacter pylori. Fur Helicobacter pylori
14622407 amfR, an essential gene for aerial mycelium formation, is a member of the AdpA regulon in the A-factor regulatory cascade in Streptomyces griseus. AdpA Streptomyces griseus IFO13350
14617666 The quorum sensing negative regulators EsaR and ExpR(Ecc), homologues within the LuxR family, retain the ability to function as activators of transcription. EsaR Pantoea stewartii subsp. stewartii n
14617654 Analysis of bvgR expression in Bordetella pertussis. BvgA Bordetella pertussis
14617647 Analysis of the Corynebacterium diphtheriae DtxR regulon: identification of a putative siderophore synthesis and transport system that is similar to the Yersinia high-pathogenicity island-encoded yersiniabactin synthesis and uptake system. DtxR Corynebacterium diphtheriae
14617183 Heat and DNA damage induction of the LexA-like regulator HdiR from Lactococcus lactis is mediated by RecA and ClpP. HdiR Lactococcus lactis
14612240 FNR-mediated regulation of hyp expression in Escherichia coli. FNR Escherichia coli
14602920 Molecular determinants of the hpa regulatory system of Escherichia coli: the HpaR repressor. HpaR Escherichia coli
14563870 Recognition of DNA by three ferric uptake regulator (Fur) homologs in Bacillus subtilis. Fur Bacillus subtilis
14526014 The iron-responsive regulator fur is transcriptionally autoregulated and not essential in Neisseria meningitidis. Fur Neisseria meningitidis
14526008 Mechanism of Pseudomonas aeruginosa RhlR transcriptional regulation of the rhlAB promoter. RhlR Pseudomonas aeruginosa
14509829 Cloning and characterization of the Actinobacillus pleuropneumoniae fur gene and its role in regulation of ApxI and AfuABC expression.
14507371 Negative feedback regulation of dnaK, clpB and lon expression by the DnaK chaperone machine in Streptomyces coelicolor, identified by transcriptome and in vivo DnaK-depletion analysis. HspR Streptomyces coelicolor
14506010 Antibiotic-dependent induction of Pseudomonas putida DOT-T1E TtgABC efflux pump is mediated by the drug binding repressor TtgR. TtgR Pseudomonas putida
14500484 Positive and negative cis-acting regulatory sequences control expression of leukotoxin in Actinobacillus actinomycetemcomitans 652. IS1301 Actinobacillus actinomycetemcomitans
1447146 Roles of CatR and cis,cis-muconate in activation of the catBC operon, which is involved in benzoate degradation in Pseudomonas putida. CatR Pseudomonas putida
1447138 Alginate synthesis in Pseudomonas aeruginosa: environmental regulation of the algC promoter. AlgR1 Pseudomonas aeruginosa
1400485 Binding of the metalloregulatory protein DtxR to the diphtheria tox operator requires a divalent heavy metal ion and protects the palindromic sequence from DNase I digestion. DtxR corynebacteriophage diphtheria
1400214 AlgR-binding sites within the algD promoter make up a set of inverted repeats separated by a large intervening segment of DNA. AlgR Pseudomonas aeruginosa
1392079 A developmentally regulated Caulobacter flagellar promoter is activated by 3' enhancer and IHF binding elements. IHF Caulobacter crescentus
1367469 The D-galactose dehydrogenase gene from Pseudomonas fluorescens: characterization of mutations leading to increased expression in Escherichia coli. Pseudomonas fluorescens
13129962 Regulation of fur expression by RpoS and fur in Vibrio vulnificus.
13129957 The naphthalene catabolic (nag) genes of Ralstonia sp. strain U2 are an operon that is regulated by NagR, a LysR-type transcriptional regulator. NagR Ralstonia sp. strain U2
13129950 Control of enzyme IIscr and sucrose-6-phosphate hydrolase activities in Streptococcus mutans by transcriptional repressor ScrR binding to the cis-active determinants of the scr regulon. ScrR Streptococcus mutans
1312212 Purification and initial characterization of AhrC: the regulator of arginine metabolism genes in Bacillus subtilis. AhrC Bacillus subtilis
12972351 Specific binding of the regulatory protein ExpG to promoter regions of the galactoglucan biosynthesis gene cluster of Sinorhizobium meliloti--a combined molecular biology and force spectroscopy investigation. ExpG Sinorhizobium meliloti
12957953 Mutational analysis of the critical bases involved in activation of the AreR-regulated sigma54-dependent promoter in Acinetobacter sp. strain ADP1. AreR Acinetobacter sp. strain ADP1
12950930 Binding of response regulator DegU to the aprE promoter is inhibited by RapG, which is counteracted by extracellular PhrG in Bacillus subtilis.
12950927 Genes controlled by the essential YycG/YycF two-component system of Bacillus subtilis revealed through a novel hybrid regulator approach. YycF Bacillus subtilis
12950914 RacA and the Soj-Spo0J system combine to effect polar chromosome segregation in sporulating Bacillus subtilis.
12949109 A dual binding site for integration host factor and the response regulator CtrA inside the Caulobacter crescentus replication origin. CtrA Caulobacter crescentus
12949088 Arsenic sensing and resistance system in the cyanobacterium Synechocystis sp. strain PCC 6803. ArsR Synechocystis sp. strain PCC 6803
12948648 Promoters of Corynebacterium glutamicum. Corynebacterium glutamicum
12947096 SmcR and cyclic AMP receptor protein coactivate Vibrio vulnificus vvpE encoding elastase through the RpoS-dependent promoter in a synergistic manner. SmcR Vibrio vulnificus
12923089 Role of RopB in growth phase expression of the SpeB cysteine protease of Streptococcus pyogenes. RopB Streptococcus pyogenes
12897002 The virulence activator AphA links quorum sensing to pathogenesis and physiology in Vibrio cholerae by repressing the expression of a penicillin amidase gene on the small chromosome. AphA Vibrio cholerae
12897000 Regulation of sialic acid catabolism by the DNA binding protein NanR in Escherichia coli. NanR Escherichia coli
12896994 In vivo and in vitro evidence that TtgV is the specific regulator of the TtgGHI multidrug and solvent efflux pump of Pseudomonas putida. TtgV Pseudomonas putida
12893272 Flagellin gene fliC of Xanthomonas campestris is upregulated by transcription factor Clp.
12892851 Vir90, a virulence-activated gene coding for a Bordetella pertussis iron-regulated outer membrane protein. BvgA Bordetella pertussis
12890034 The BceRS two-component regulatory system induces expression of the bacitracin transporter, BceAB, in Bacillus subtilis. BceR Bacillus subtilis
12890020 Characterization of the roles of NikR, a nickel-responsive pleiotropic autoregulator of Helicobacter pylori. NikR Helicobacter pylori
12883001 Identification of iron-activated and -repressed Fur-dependent genes by transcriptome analysis of Neisseria meningitidis group B. Fur Neisseria meningitidis
12881516 A novel DNA-binding site for the ferric uptake regulator (Fur) protein from Bradyrhizobium japonicum. Fur Bradyrhizobium japonicum
12871947 LeuO-mediated transcriptional derepression. LeuO Salmonella typhimurium
12867456 Characterization of a new LexA binding motif in the marine magnetotactic bacterium strain MC-1. LexA Magnetococcus marinus MC-1
12867437 NhaR and RcsB independently regulate the osmCp1 promoter of Escherichia coli at overlapping regulatory sites. NhaR, RcsB Escherichia coli
12864858 LexA-independent DNA damage-mediated induction of gene expression in Myxococcus xanthus. LexA Myxococcus xanthus
12864849 Complex regulation of csgD promoter activity by global regulatory proteins. IHF Salmonella typhimurium
12851461 Identification of an activator protein required for the induction of fruA, a gene essential for fruiting body development in Myxococcus xanthus. MrpC Myxococcus xanthus
12828641 The RepA and RepB autorepressors and TraR play opposing roles in the regulation of a Ti plasmid repABC operon. RepA Agrobacterium tumefaciens R10
12813078 Characterization of the Vibrio vulnificus putAP operon, encoding proline dehydrogenase and proline permease, and its differential expression in response to osmotic stress.
12813061 Identification and molecular characterization of the Mg2+ stimulon of Escherichia coli. PhoP Escherichia coli
12801423 Characterization of the iron-regulated desA promoter of Streptomyces pilosus as a system for controlled gene expression in actinomycetes. DmdR Streptomyces pilosus
12775687 PhoP-responsive expression of the Salmonella enterica serovar typhimurium slyA gene. SlyA Salmonella enterica serovar Typhimurium
12754257 Recruitment of sigma54-RNA polymerase to the Pu promoter of Pseudomonas putida through integration host factor-mediated positioning switch of alpha subunit carboxyl-terminal domain on an UP-like element. IHF Pseudomonas putida
12753196 A LuxR-type regulator from Agrobacterium tumefaciens elevates Ti plasmid copy number by activating transcription of plasmid replication genes. TraR Agrobacterium tumefaciens
12732310 From motility to virulence: Sensing and responding to environmental signals in Vibrio cholerae. various Vibrio cholerae
12730172 CodY is a nutritional repressor of flagellar gene expression in Bacillus subtilis. CodY Bacillus subtilis
12706510 Global regulation in Pseudomonas aeruginosa: the regulatory protein AlgR2 (AlgQ) acts as a modulator of quorum sensing. AlgR2 Pseudomonas aeruginosa
12704132 Characterization of the role of the divalent metal ion-dependent transcriptional repressor MntR in the virulence of Staphylococcus aureus. MntR Staphylococcus aureus
12700268 Involvement of the adc operon and manganese homeostasis in Streptococcus gordonii biofilm formation. AdcR Streptococcus gordonii
12700263 Identification of the DNA binding sites of PerA, the transcriptional activator of the bfp and per operons in enteropathogenic Escherichia coli. PerA Escherichia coli
12694625 Rv3133c/dosR is a transcription factor that mediates the hypoxic response of Mycobacterium tuberculosis. DevR Mycobacterium tuberculosis
12670973 Geobacter sulfurreducens has two autoregulated lexA genes whose products do not bind the recA promoter: differing responses of lexA and recA to DNA damage. LexA Geobacter sulfurreducens
12670680 The alternative sigma factor RpoN regulates the quorum sensing gene rhlI in Pseudomonas aeruginosa. RpoN Pseudomonas aeruginosa PAO1
12670500 Styrene-catabolism regulation in Pseudomonas fluorescens ST: phosphorylation of StyR induces dimerization and cooperative DNA-binding. StyR Pseudomonas fluorescens ST
12654908 The mechanism of regulation of bacteriophage lambda pR promoter activity by Escherichia coli DnaA protein. DnaA Escherichia coli
12646225 ZccR--a MerR-like regulator from Bordetella pertussis which responds to zinc, cadmium, and cobalt. ZccR Bordetella pertussis
12644489 Architecture of a fur binding site: a comparative analysis.
12624202 An amino acid change near the carboxyl terminus of the Streptococcus gordonii regulatory protein Rgg affects its abilities to bind DNA and influence expression of the glucosyltransferase gene gtfG. Rgg Streptococcus gordonii
12624200 Identification and in vivo characterization of PpaA, a regulator of photosystem formation in Rhodobacter sphaeroides. PpaA Rhodobacter sphaeroides
12622823 Regulation of the central glycolytic genes in Bacillus subtilis: binding of the repressor CggR to its single DNA target sequence is modulated by fructose-1,6-bisphosphate. CggR Bacillus subtilis
12620848 Transcriptional cross-regulation of the catechol and protocatechuate branches of the beta-ketoadipate pathway contributes to carbon source-dependent expression of the Acinetobacter sp. strain ADP1 pobA gene. CatM Acinetobacter sp. strain ADP1
12618455 Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis. CodY Bacillus subtilis
12601011 Interactions of the cbbII promoter-operator region with CbbR and RegA (PrrA) regulators indicate distinct mechanisms to control expression of the two cbb operons of Rhodobacter sphaeroides. CbbR Rhodobacter sphaeroides
12591885 Complex regulation of the Bacillus subtilis aconitase gene.
12591879 The cyclic AMP-cyclic AMP receptor protein complex regulates activity of the traJ promoter of the Escherichia coli conjugative plasmid pRK100. CRP Escherichia coli
12581365 Osmoregulation in Lactococcus lactis: BusR, a transcriptional repressor of the glycine betaine uptake system BusA. BusR Lactococcus lactis
12562798 Transcriptional switch on of ssgA by A-factor, which is essential for spore septum formation in Streptomyces griseus. AdpA Streptomyces griseus
12562794 Analysis of DNA binding and transcriptional activation by the LysR-type transcriptional regulator CbbR of Xanthobacter flavus. CbbR Xanthobacter flavus
12559906 Regulation of arginine biosynthesis in the psychropiezophilic bacterium Moritella profunda: in vivo repressibility and in vitro repressor-operator contact probing. ArgR Moritella profunda
12543916 Manganese-dependent regulation of the endocarditis-associated virulence factor EfaA of Enterococcus faecalis. EfaR Enterococcus faecalis
12535530 The response regulator BvgA and RNA polymerase alpha subunit C-terminal domain bind simultaneously to different faces of the same segment of promoter DNA. BvgA Bordetella pertussis
12535077 A new Escherichia coli metabolic competency: growth on fatty acids by a novel anaerobic beta-oxidation pathway. FadR Escherichia coli
12527761 Mutational analysis of the Chlamydia trachomatis dnaK promoter defines the optimal -35 promoter element. sigma-70 Chlamydia trachomatis
12519198 Inducible bacteriocin production in Lactobacillus is regulated by differential expression of the pln operons and by two antagonizing response regulators, the activity of which is enhanced upon phosphorylation. PlnC Lactobacillus plantarum C11
12492863 Two different modes of transcription repression of the Escherichia coli acetate operon by IclR. IclR Escherichia coli
12486041 The Streptococcus pneumoniae cia regulon: CiaR target sites and transcription profile analysis. CiaR Streptococcus pneumoniae
12481995 Mutational and transcriptional analysis of the type III secretion system of Bradyrhizobium japonicum. NodW Bradyrhizobium japonicum
12471445 Characterization of Xanthomonas axonopodis pv. citri LexA: recognition of the LexA binding site. LexA Xanthomonas axonopodis pv. citri
12460564 Regulation of the Escherichia coli allantoin regulon: coordinated function of the repressor AllR and the activator AllS. AllR Escherichia coli
12446644 Differential regulation of the Bordetella bipA gene: distinct roles for different BvgA binding sites. BvgA Bordetella pertussis
12446639 Analysis of a DtxR-like metalloregulatory protein, MntR, from Corynebacterium diphtheriae that controls expression of an ABC metal transporter by an Mn(2+)-dependent mechanism. MntR Corynebacterium diphtheriae
12437214 Integration host factor is essential for the optimal expression of the styABCD operon in Pseudomonas fluorescens ST. IHF Pseudomonas fluorescens ST
12427949 A new regulatory DNA motif of the gamma subclass Proteobacteria: identification of the LexA protein binding site of the plant pathogen Xylella fastidiosa. LexA Xylella fastidiosa
12426349 Arginine operator binding by heterologous and chimeric ArgR repressors from Escherichia coli and Bacillus stearothermophilus. ArgR Bacillus stearothermophilus
12426345 Functional analysis of the heat shock regulator HrcA of Chlamydia trachomatis. HrcA Chlamydia trachomatis
12426338 Functional analysis of the Bacillus subtilis Zur regulon. Zur Bacillus subtilis
12423024 Coupling of iron assimilation and pectinolysis in Erwinia chrysanthemi 3937. Fur Erwinia chrysanthemi 3937
12421317 Regulation of virulence gene expression in Vibrio cholerae by quorum sensing: HapR functions at the aphA promoter. HapR Vibrio cholerae
12421315 Autoregulation of Helicobacter pylori Fur revealed by functional analysis of the iron-binding site. Fur Helicobacter pylori
12406212 Two transcriptional regulators GlnR and GlnRII are involved in regulation of nitrogen metabolism in Streptomyces coelicolor A3(2). GlnRII Streptomyces coelicolor A3(2)
12399504 Functional analysis of TraA, the sex pheromone receptor encoded by pPD1, in a promoter region essential for the mating response in Enterococcus faecalis. TraA Enterococcus faecalis
12391883 [Functional interrelationship between elements of the Escherichia coli udp gene promotor responsible for binding regulatory proteins CytR, CRP, and RNA polymerase]. CytR Escherichia coli
12374844 A green nonsulfur bacterium, Dehalococcoides ethenogenes, with the LexA binding sequence found in gram-positive organisms. LexA Dehalococcoides ethenogenes
12374836 Control by A-factor of a metalloendopeptidase gene involved in aerial mycelium formation in Streptomyces griseus. AdpA Streptomyces griseus IFO13350
12374814 Recognition of DNA by Fur: a reinterpretation of the Fur box consensus sequence. Fur Bacillus subtilis
12368452 The Pseudomonas aeruginosa alternative sigma factor PvdS controls exotoxin A expression and is expressed in lung infections associated with cystic fibrosis. PvdS Pseudomonas aeruginosa
12368433 Negative transcriptional regulation of the mce3 operon in Mycobacterium tuberculosis. Mce3R Mycobacterium tuberculosis
12367524 The FxRxHrS motif: a conserved region essential for DNA binding of the VirR response regulator from Clostridium perfringens. VirR Clostridium perfringens
12367523 Fur-DNA interactions at the bidirectional fepDGC-entS promoter region in Escherichia coli.
12366834 MetR and CRP bind to the Vibrio harveyi lux promoters and regulate luminescence. CRP Vibrio harveyi
12356775 Promoter analysis and regulatory characteristics of vvhBA encoding cytolytic hemolysin of Vibrio vulnificus. CRP Vibrio vulnificus
12354231 OhrR, a transcription repressor that senses and responds to changes in organic peroxide levels in Xanthomonas campestris pv. phaseoli. OhrR Xanthomonas campestris pv. phaseoli
12354229 Global analysis of the Bacillus subtilis Fur regulon and the iron starvation stimulon. Fur Bacillus subtilis
12228300 The divergently transcribed Streptococcus parasanguis virulence-associated fimA operon encoding an Mn(2+)-responsive metal transporter and pepO encoding a zinc metallopeptidase are not coordinately regulated. ScaR Streptococcus parasanguis FW213
12218010 FleQ, the major flagellar gene regulator in Pseudomonas aeruginosa, binds to enhancer sites located either upstream or atypically downstream of the RpoN binding site. FleQ Pseudomonas aeruginosa
12218009 fleQ, the gene encoding the major flagellar regulator of Pseudomonas aeruginosa, is sigma70 dependent and is downregulated by Vfr, a homolog of Escherichia coli cyclic AMP receptor protein. Vfr Pseudomonas aeruginosa
12217688 A comprehensive alanine scanning mutagenesis of the Escherichia coli transcriptional activator SoxS: identifying amino acids important for DNA binding and transcription activation. SoxS Escherichia coli
12207696 GeneChip expression analysis of the iron starvation response in Pseudomonas aeruginosa: identification of novel pyoverdine biosynthesis genes. Fur, PvdS Pseudomonas aeruginosa
12207690 Identification of novel hrp-regulated genes through functional genomic analysis of the Pseudomonas syringae pv. tomato DC3000 genome. HrpL Pseudomonas syringae pv. tomato DC3000
12180919 A peroxide-induced zinc uptake system plays an important role in protection against oxidative stress in Bacillus subtilis. PerR Bacillus subtilis
12169610 Identification of a DtxR-regulated operon that is essential for siderophore-dependent iron uptake in Corynebacterium diphtheriae. DtxR Corynebacterium diphtheriae
12169605 Growth phase-dependent regulation of target gene promoters for binding of the essential orphan response regulator HP1043 of Helicobacter pylori. HP1043 Helicobacter pylori
12169591 Identification of Bacillus subtilis CysL, a regulator of the cysJI operon, which encodes sulfite reductase. CysL Bacillus subtilis
12142431 Microarray transcription profiling of a Shewanella oneidensis etrA mutant. Fnr Shewanella oneidensis
12139621 Pseudomonas aeruginosa RoxR, a response regulator related to Rhodobacter sphaeroides PrrA, activates expression of the cyanide-insensitive terminal oxidase. RoxR Pseudomonas aeruginosa
12123463 Control of the glycolytic gapA operon by the catabolite control protein A in Bacillus subtilis: a novel mechanism of CcpA-mediated regulation. CcpA Bacillus subtilis
12123454 Novel mode of transcription regulation of divergently overlapping promoters by PhoP, the regulator of two-component system sensing external magnesium availability. PhoP Escherichia coli
12100558 Direct and indirect roles of CcpA in regulation of Bacillus subtilis Krebs cycle genes. CcpA Bacillus subtilis
12093725 NO sensing by FNR: regulation of the Escherichia coli NO-detoxifying flavohaemoglobin, Hmp. FNR Escherichia coli
12087407 Structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA. TraR Agrobacterium tumefaciens
12085767 Screening for the target gene of cyanobacterial cAMP receptor protein SYCRP1. Crp Synechocystis sp. PCC 6803
12083764 Transcription of Xanthomonas campestris prt1 gene encoding protease 1 increases during stationary phase and requires global transcription factor Clp.
12081972 A repressor protein, PhaR, regulates polyhydroxyalkanoate (PHA) synthesis via its direct interaction with PHA. PhaR Paracoccus denitrificans
12081969 The gonococcal fur regulon: identification of additional genes involved in major catabolic, recombination, and secretory pathways. Fur Neisseria gonorrhoeae
12076794 Role of the Pseudomonas aeruginosa las and rhl quorum-sensing systems in rhlI regulation. LasR Pseudomonas aeruginosa
12051938 Quantification of the influence of HPrSer46P on CcpA-cre interaction. CcpA Bacillus megateriumxyl
12032345 Synergistic transcriptional activation by one regulatory protein in response to two metabolites. BenM Acinetobacter sp. ADP1
12029045 Definition of the mycobacterial SOS box and use to identify LexA-regulated genes in Mycobacterium tuberculosis. lexA Mycobacterium tuberculosis
12029044 Regulation of the Bacillus subtilis fur and perR genes by PerR: not all members of the PerR regulon are peroxide inducible. PerR Bacillus subtilis
12015814 Biochemical analysis of the recombinant Fur (ferric uptake regulator) protein from Anabaena PCC 7119: factors affecting its oligomerization state. Fur Anabaena PCC 7119
12010971 NikR mediates nickel-responsive transcriptional induction of urease expression in Helicobacter pylori. NikR Helicobacter pylori
12007798 Genetic organization of the lexA, recA and recX genes in Xanthomonas campestris. LexA Xanthomonas campestris
12003953 CcaR is an autoregulatory protein that binds to the ccaR and cefD-cmcI promoters of the cephamycin C-clavulanic acid cluster in Streptomyces clavuligerus. CcaR Streptomyces clavuligerus
12003942 Characterization of interactions between the transcriptional repressor PhlF and its binding site at the phlA promoter in Pseudomonas fluorescens F113. PhlF Pseudomonas fluorescens F113
12003934 ArgR-independent induction and ArgR-dependent superinduction of the astCADBE operon in Escherichia coli. ArgR Escherichia coli
12003931 Identification and physical characterization of the HbpR binding sites of the hbpC and hbpD promoters. HbpR E.coli
11994159 The repressor for an organic peroxide-inducible operon is uniquely regulated at multiple levels. OhrR Xanthomonas campestris pv phaseoli
11985717 Regulation of the bacillus subtilis ccpC gene by ccpA and ccpC. CodY Bacillus subtilis
11983871 The OhrR repressor senses organic hydroperoxides by reversible formation of a cysteine-sulfenic acid derivative. OhrR Bacillus subtilis
11983865 Repression of photosynthesis gene expression by formation of a disulfide bond in CrtJ. CrtJ Rhodobacter capsulatus SB1003
11976310 AerR, a second aerobic repressor of photosynthesis gene expression in Rhodobacter capsulatus. AerR Rhodobacter capsulatus
11972789 Binding site requirements of the virulence gene regulator AphB: differential affinities for the Vibrio cholerae classical and El Tor tcpPH promoters. AphB Vibrio cholerae
11934508 Mutational analysis of the bglH catabolite-responsive element (cre) in Lactobacillus plantarum. CcpA Lactobacillus plantarum
11932465 The benPK operon, proposed to play a role in transport, is part of a regulon for benzoate catabolism in Acinetobacter sp. strain ADP1. BenM, CatM Acinetobacter sp. strain ADP1
11930012 Genes directly controlled by CtrA, a master regulator of the Caulobacter cell cycle. CtrA Caulobacter crescentus
11918804 Identification of binding sites for the group A streptococcal global regulator CovR. CovR Streptococcus pyogenes
11917014 Rhodobacter sphaeroides LexA has dual activity: optimising and repressing recA gene transcription. LexA Rhodobacter sphaeroides
11914368 TetR family member psrA directly binds the Pseudomonas rpoS and psrA promoters. PsrA Pseudomonas putida
11911183 FimZ binds the Salmonella typhimurium fimA promoter region and may regulate its own expression with FimY. FimZ Salmonella typhimurium
11889107 Differential DNA binding of transcriptional regulator PcaU from Acinetobacter sp. strain ADP1. PcaU Acinetobacter sp. strain ADP1
11886560 The Fur repressor controls transcription of iron-activated and -repressed genes in Helicobacter pylori. Fur Helicobacter pylori
11882648 Interaction of the Salmonella typhimurium transcription and virulence factor SlyA with target DNA and identification of members of the SlyA regulon. SlyA Salmonella typhimurium
11866516 Thermodynamics of E. coli cytidine repressor interactions with DNA: distinct modes of binding to different operators suggests a role in differential gene regulation. CytR Escherichia coli
11849541 Regulation of gene expression in Vibrio cholerae by ToxT involves both antirepression and RNA polymerase stimulation. ToxT Vibrio cholerae
11844754 Reconstitution of the trimethylamine oxide reductase regulatory elements of Shewanella oneidensis in Escherichia coli. TorR Shewanella oneidensis
11827471 Two targets in pCF10 DNA for PrgX binding: their role in production of Qa and prgX mRNA and in regulation of pheromone-inducible conjugation. PrgX Enterococcus faecalis
11807066 Global genomic analysis of AlgU (sigma(E))-dependent promoters (sigmulon) in Pseudomonas aeruginosa and implications for inflammatory processes in cystic fibrosis. AlgU Pseudomonas aeruginosa
11807065 Regulatory RNA as mediator in GacA/RsmA-dependent global control of exoproduct formation in Pseudomonas fluorescens CHA0. GacA Pseudomonas fluorescens CHA0
11786010 Transcription regulation in thermophilic bacteria: high resolution contact probing of Bacillus stearothermophilus and Thermotoga neapolitana arginine repressor-operator interactions. ArgR Thermotoga neapolitana
11751828 Transcription factor FnrP from Paracoccus denitrificans contains an iron-sulfur cluster and is activated by anoxia: identification of essential cysteine residues. FnrP Paracoccus denitrificans
11751811 Identification of target genes regulated by the two-component system HP166-HP165 of Helicobacter pylori. HP166 Helicobacter pylori
11748231 Transcriptional activation of a heat-shock gene, lonD, of Myxococcus xanthus by a two component histidine-aspartate phosphorelay system. HsfA Myxococcus xanthus
11742080 IscR, an Fe-S cluster-containing transcription factor, represses expression of Escherichia coli genes encoding Fe-S cluster assembly proteins. IscR Escherichia coli
11741852 Analysis of cis- and trans-acting factors involved in regulation of the Streptococcus mutans fructanase gene (fruA). ccpA Streptococcus mutans
11741847 Regulation of the metC-cysK operon, involved in sulfur metabolism in Lactococcus lactis. CmbR Lactococcus lactis
11717289 Regulation of Streptococcus pneumoniae clp genes and their role in competence development and stress survival. CtsR Streptococcus pneumoniae
11698370 Modulation of anaerobic energy metabolism of Bacillus subtilis by arfM (ywiD). Fnr 11698370
11694511 In vivo UV laser footprinting of the Pseudomonas putidasigma 54Pu promoter reveals that integration host factor couples transcriptional activity to growth phase. IHF Pseudomonas putida
11673419 Molecular characterization and regulation of the aguBA operon, responsible for agmatine utilization in Pseudomonas aeruginosa PAO1. AguR Pseudomonas aeruginosa
11592632 Iron-Mediated regulation of alkaline proteinase production in Pseudomonas aeruginosa.
11580833 cDNA-AFLP analysis unravels a genome-wide hrpG-regulon in the plant pathogen Xanthomonas campestris pv. vesicatoria.
11580832 Environmental control of invasin expression in Yersinia pseudotuberculosis is mediated by regulation of RovA, a transcriptional activator of the SlyA/Hor family. RovA Yersinia pseudotuberculosis
11566998 Escherichia coli FadR positively regulates transcription of the fabB fatty acid biosynthetic gene. FadR Escherichia coli
11566986 Involvement of two distinct catabolite-responsive elements in catabolite repression of the Bacillus subtilis myo-inositol (iol) operon. CcpA Bacillus subtilis
11555297 Novel mode of transcription regulation by SdiA, an Escherichia coli homologue of the quorum-sensing regulator. SdiA Escherichia coli
11555283 A complex role for the gamma-butyrolactone SCB1 in regulating antibiotic production in Streptomyces coelicolor A3(2). ScbR Streptomyces coelicolor A3(2)
11553598 Regulation of Streptococcus gordonii sspB by the sspA gene product. SspA Streptococcus gordonii
11544214 Promoter specificity elements in Pseudomonas aeruginosa quorum-sensing-controlled genes. LasR Pseudomonas aeruginosa
11532153 The CRP-cAMP complex and downregulation of the glnAp2 promoter provides a novel regulatory linkage between carbon metabolism and nitrogen assimilation in Escherichia coli. CRP Escherichia coli
11532148 Roles of metal ions and hydrogen peroxide in modulating the interaction of the Bacillus subtilis PerR peroxide regulon repressor with operator DNA. PerR Bacillus subtilis
11500408 Characterization of an endoprotease (PrpL) encoded by a PvdS-regulated gene in Pseudomonas aeruginosa. PvdS Pseudomonas aeruginosa
11495992 Growth medium composition-determined regulatory mechanisms are superimposed on CatR-mediated transcription from the pheBA and catBCA promoters in Pseudomonas putida. CatR Pseudomonas putida
11489860 Genetic and structural organization of the aminophenol catabolic operon and its implication for evolutionary process. NbzR Pseudomonas putida
11489854 Unusual regulatory elements for iron deficiency induction of the idiA gene of Synechococcus elongatus PCC 7942. IdiB Synechococcus elongatus PCC 7942
11489130 Characterization of integration host factor (IHF) binding upstream of the cysteine-rich protein operon (omcAB) promoter of Chlamydia trachomatis LGV serovar L2. IHF Chlamydia trachomatis LGV serovar L2
11489126 Overlapping binding sites for the virulence gene regulators AphA, AphB and cAMP-CRP at the Vibrio cholerae tcpPH promoter. AphA, AphB, CRP Vibrio cholerae
11472929 Identification and functional characterization of CbaR, a MarR-like modulator of the cbaABC-encoded chlorobenzoate catabolism pathway. CbaR Comamonas testosteroni BR60
11466300 Iron-dependent transcription of the frpB gene of Helicobacter pylori is controlled by the Fur repressor protein. Fur Helicobacter pylori
11466291 The HilA box and sequences outside it determine the magnitude of HilA-dependent activation of P(prgH) from Salmonella pathogenicity island 1. HilA Salmonella enterica serovar Typhimurium
11459836 BphS, a key transcriptional regulator of bph genes involved in polychlorinated biphenyl/biphenyl degradation in Pseudomonas sp. KKS102. BphS Pseudomonas
11443074 Complex regulation of the organic hydroperoxide resistance gene (ohr) from Xanthomonas involves OhrR, a novel organic peroxide-inducible negative regulator, and posttranscriptional modifications. OhrR Xanthomonas campestris pv. phaseoli
11437342 Regulation of virulence in Vibrio cholerae. Vibrio cholerae
11430407 CbbR, a LysR-type transcriptional regulator from Hydrogenophilus thermoluteolus, binds two cbb promoter regions. CbbR Hydrogenophilus thermoluteolus
11425700 The functional ccpA gene is required for carbon catabolite repression in Lactobacillus plantarum. CcpA Lactobacillus plantarum
11419938 Conformational changes of the ferric uptake regulation protein upon metal activation and DNA binding; first evidence of structural homologies with the diphtheria toxin repressor.
11418559 Control of the arabinose regulon in Bacillus subtilis by AraR in vivo: crucial roles of operators, cooperativity, and DNA looping. AraR Bacillus subtilis 168
11418558 Identification of a DNA binding region in GerE from Bacillus subtilis. GerE Bacillus subtilis
11418552 OhrR is a repressor of ohrA, a key organic hydroperoxide resistance determinant in Bacillus subtilis. OhrR Bacillus subtilis
11410342 PhaR, a protein of unknown function conserved among short-chain-length polyhydroxyalkanoic acids producing bacteria, is a DNA-binding protein and represses Paracoccus denitrificans phaP expression in vitro. PhaR Paracoccus denitrificans
11401718 Systematic mutagenesis of the DNA binding sites for SoxS in the Escherichia coli zwf and fpr promoters: identifying nucleotides required for DNA binding and transcription activation. SoxS Escherichia coli
11401705 Mutational analysis of the high-affinity BvgA binding site in the fha promoter of Bordetella pertussis. BvgA Bordetella pertussis
11401704 Repression of virulence genes by phosphorylation-dependent oligomerization of CsrR at target promoters in S. pyogenes. CsrR Streptococcus pyogenes
11401688 A connection between stress and development in the multicellular prokaryote Streptomyces coelicolor A3(2). BldD Streptomyces coelicolor A3(2)
11395466 Signal transduction cascade for regulation of RpoS: temperature regulation of DsrA. LeuO Escherichia coli
11395454 Activation from a distance: roles of Lrp and integration host factor in transcriptional activation of gltBDF. Lrp Escherichia coli
11390693 Analysis of Pseudomonas putida alkane-degradation gene clusters and flanking insertion sequences: evolution and regulation of the alk genes. AlkS Pseudomonas putida
11371535 Regulation of rpoS gene expression in Pseudomonas: involvement of a TetR family regulator.
11370867 Regulation of bacteriocin production in Lactobacillus plantarum depends on a conserved promoter arrangement with consensus binding sequence. PlnC and PlnD Lactobacillus plantarum C11
11361075 Catabolite regulation of the cytochrome c550-encoding Bacillus subtilis cccA gene. CcpA Bacillus subtilis
11359576 Cloning and functional characterization of the Pseudomonas aeruginosa rhlC gene that encodes rhamnosyltransferase 2, an enzyme responsible for di-rhamnolipid biosynthesis. RpoN Pseudomonas aeruginosa PAO1
11359572 Diversity in the Bordetella virulence regulon: transcriptional control of a Bvg-intermediate phase gene. BvgA Bordetella virulence
11349039 PerR controls oxidative stress resistance and iron storage proteins and is required for virulence in Staphylococcus aureus. PerR Staphylococcus aureus
11344161 RegG, a CcpA homolog, participates in regulation of amylase-binding protein A gene (abpA) expression in Streptococcus gordonii. RegG Streptococcus gordonii
11325950 A homolog of the CtrA cell cycle regulator is present and essential in Sinorhizobium meliloti. CtrA Sinorhizobium meliloti
11320132 Expression of the gap gene encoding glyceraldehyde-3-phosphate dehydrogenase of Streptomyces aureofaciens requires GapR, a member of the AraC/XylS family of transcriptional activators. GapR Streptomyces aureofaciens
11306089 A model on the regulation of 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase expression in Comamonas testosteroni. Rep2 Comamonas testosteroni
11298739 Nucleotide sequence analysis of 5'-flanking region of salicylate hydroxylase gene, and identification and purification of a LysR-type regulator, SalR. CatR Pseudomonas putida
11298292 BldD is a direct regulator of key developmental genes in Streptomyces coelicolor A3(2). BldD Streptomyces coelicolor A3(2)
11297524 Differential expression of Vibrio vulnificus elastase gene in a growth phase-dependent manner by two different types of promoters.
11292804 In vivo and in vitro effects of integration host factor at the DmpR-regulated sigma(54)-dependent Po promoter. IHF Pseudomonas putida
11278784 MalR-mediated regulation of the Streptococcus pneumoniae malMP operon at promoter PM. Influence of a proximal divergent promoter region and competition between MalR and RNA polymerase proteins. MalR Streptococcus pneumoniae
11251851 Catabolite repression mediated by the CcpA protein in Bacillus subtilis: novel modes of regulation revealed by whole-genome analyses. CcpA Bacillus subtilis
11251844 A novel mechanism controls anaerobic and catabolite regulation of the Escherichia coli tdc operon. CRP Escherichia coli
11244084 Transcriptional activation of the Bacillus subtilis ackA promoter requires sequences upstream of the CcpA binding site. CcpA Bacillus subtilis
11222621 Analysis of promoters recognized by PvdS, an extracytoplasmic-function sigma factor protein from Pseudomonas aeruginosa. PvdS Pseudomonas aeruginosa
11222606 Regulatory architecture of the iron-regulated fepD-ybdA bidirectional promoter region in Escherichia coli.
11222601 Identification of the varR gene as a transcriptional regulator of virginiamycin S resistance in Streptomyces virginiae. VarR Streptomyces virginiae
11208776 MexR repressor of the mexAB-oprM multidrug efflux operon of Pseudomonas aeruginosa: identification of MexR binding sites in the mexA-mexR intergenic region. MexR Pseudomonas aeruginosa
11169114 A novel promoter architecture for microaerobic activation by the anaerobic transcription factor FNR. FNR Escherichia coli
11161053 Redox control of ntcA gene expression in Synechocystis sp. PCC 6803. Nitrogen availability and electron transport regulate the levels of the NtcA protein. NtcA Synechocystis sp. PCC 6803
11160798 Pseudomonas putida CE2010 can degrade biphenyl by a mosaic pathway encoded by the tod operon and cmtE, which are identical to those of P. putida F1 except for a single base difference in the operator-promoter region of the cmt operon. CymR Psudomonas putida
11160100 RNA arbitrarily primed PCR survey of genes regulated by ToxR in the deep-sea bacterium Photobacterium profundum strain SS9. ToxR Photobacterium profundum strain SS9
11136469 CueR (YbbI) of Escherichia coli is a MerR family regulator controlling expression of the copper exporter CopA. CueR Escherichia coli
11133968 Temporal regulation of genes encoding the flagellar proximal rod in Caulobacter crescentus. CtrA Caulobacter crescentus
11133947 Genetic and biochemical analyses of BvgA interaction with the secondary binding region of the fha promoter of Bordetella pertussis. BvgA Bordetella pertussis
11133942 The gdhB gene of Pseudomonas aeruginosa encodes an arginine-inducible NAD(+)-dependent glutamate dehydrogenase which is subject to allosteric regulation. ArgR Pseudomonas aeruginosa
11133939 In Staphylococcus aureus, fur is an interactive regulator with PerR, contributes to virulence, and Is necessary for oxidative stress resistance through positive regulation of catalase and iron homeostasis. PerR Staphylococcus aureus
11133933 Nitrogen control in cyanobacteria. NtcA Synechococcus sp, Anabaena sp
11123682 The HspR regulon of Streptomyces coelicolor: a role for the DnaK chaperone as a transcriptional co-repressordagger. DnaK Streptomyces coelicolor
11123672 Transcriptional regulation and immunity in mycobacteriophage Bxb1. gp69 Mycobacteriophage Bxb1
11114926 Transcriptional organization and dynamic expression of the hbpCAD genes, which encode the first three enzymes for 2-hydroxybiphenyl degradation in Pseudomonas azelaica HBP1. HbpR Pseudomonas
11101675 A method for direct cloning of fur-regulated genes: identification of seven new fur-regulated loci in Escherichia coli.
11101674 YeiL, the third member of the CRP-FNR family in Escherichia coli. YeiL Escherichia coli
11092854 Transcriptional control of the hydrogen cyanide biosynthetic genes hcnABC by the anaerobic regulator ANR and the quorum-sensing regulators LasR and RhlR in Pseudomonas aeruginosa. ANR / LasR / RhlR Pseudomonas aeruginosa PAO1
11085275 The DNA-binding characteristics of the Streptomyces reticuli regulator FurS depend on the redox state of its cysteine residues. FurS Streptomyces reticuli
11084595 Improvement in bioreactor productivities using free radicals: HOCl-induced overproduction of xanthan gum from Xanthomonas campestris and its mechanism. SoxS Xanthomonas campestris
11069684 Activation of the Anabaena nir operon promoter requires both NtcA (CAP family) and NtcB (LysR family) transcription factors. NtcB Anabaena sp. PCC 7120
11069683 The clpP multigenic family in Streptomyces lividans: conditional expression of the clpP3 clpP4 operon is controlled by PopR, a novel transcriptional activator. PopR Streptomyces lividans
11065370 Identification of DNA-binding proteins involved in regulation of expression of the Streptomyces aureofaciens sigF gene, which encodes sporulation sigma factor sigma(F). RsfA Streptomyces aureofaciens
11065368 Catabolite repression of dra-nupC-pdp operon expression in Bacillus subtilis. CcpA Bacillus subtilis
11059492 Regulation of hrp genes and type III protein secretion in Erwinia amylovora by HrpX/HrpY, a novel two-component system, and HrpS.
11058113 An imperfect inverted repeat is critical for DNA binding of the response regulator RegR of Bradyrhizobium japonicum. RegR Bradyrhizobium japonicum
11053384 The Pseudomonas aeruginosa lectins PA-IL and PA-IIL are controlled by quorum sensing and by RpoS. RpoS Pseudomonas aeruginosa
11053382 The malonate decarboxylase operon of Acinetobacter calcoaceticus KCCM 40902 is regulated by malonate and the transcriptional repressor MdcY. MdcY Acinetobacter calcoaceticus KCCM 40902
11053378 Silencing and activation of ClyA cytotoxin expression in Escherichia coli. CRP Escherichia coli
11053377 BenR, a XylS homologue, regulates three different pathways of aromatic acid degradation in Pseudomonas putida. BenR Pseudomonas putida
11050092 A transcriptional regulator of a pristinamycin resistance gene in Streptomyces coelicolor. Pip Streptomyces coelicolor
11043468 Molecular analysis of thermoregulation of phaseolotoxin-resistant ornithine carbamoyltransferase (argK) from Pseudomonas syringae pv. phaseolicola. CorR Pseudomonas syringae pv. glycinea PG4180
11029696 Expression of the virulence-related Sca (Mn2+) permease in Streptococcus gordonii is regulated by a diphtheria toxin metallorepressor-like protein ScaR. ScaR Streptococcus gordonii
11029691 The Vibrio cholerae ToxR/TcpP/ToxT virulence cascade: distinct roles for two membrane-localized transcriptional activators on a single promoter. ToxR, TcpP Vibrio cholerae
11024268 Regulation of anaerobic arginine catabolism in Bacillus licheniformis by a protein of the Crp/Fnr family. ArcR Bacillus licheniformis
11021938 The nitric oxide regulated nor promoter of Paracoccus denitrificans. NNR Paracoccus denitrificans
11016850 Cloning and characterization of a Legionella pneumophila-specific gene encoding a member of the LysR family of transcriptional regulators. FlaR Legionella pneumophila
11004165 Transcriptional regulation of the cpr gene cluster in ortho-chlorophenol-respiring Desulfitobacterium dehalogenans. CprK Desulfitobacterium dehalogenans
10998180 Molecular and physiological analysis of an OxyR-regulated ahpC promoter in Xanthomonas campestris pv. phaseoli. OxyR Xanthomonas campestris pv. phaseoli
10993722 Analysis of a cell-cycle promoter bound by a response regulator. CtrA Caulobacter crescentus
10972815 AmtR, a global repressor in the nitrogen regulation system of Corynebacterium glutamicum. AmtR Corynebacterium glutamicum
10966390 A serine protease-encoding gene (aprII) of Alteromonas sp. Strain O-7 is regulated by the iron uptake regulator (Fur) protein. Fur Alteromonas sp. Strain O-7
10954081 Analysis of the expression of the Rhodobacter sphaeroides lexA gene. LexA Rhodobacter sphaeroides
10931350 Characterization of the 2-ketogluconate utilization operon in Pseudomonas aeruginosa PAO1. PtxS Pseudomonas aeruginosa
10923791 Transcription of emrKY is regulated by the EvgA-EvgS two-component system in Escherichia coli K-12. EvgA Escherichia coli K-12
10915804 Transcriptional activation of an Escherichia coli copper efflux regulon by the chromosomal MerR homologue, cueR. CueR Escherichia coli
10913087 Role of the Pseudomonas aeruginosa oxyR-recG operon in oxidative stress defense and DNA repair: OxyR-dependent regulation of katB-ankB, ahpB, and ahpC-ahpF. OxyR Pseudomonas aeruginosa
10913081 Phosphate starvation-inducible proteins of Bacillus subtilis: proteomics and transcriptional analysis. PhoP Bacillus subtilis
10903856 Multiple regulators and their interactions in vivo and in vitro with the cbb regulons of Rhodobacter capsulatus. CbbR Rhodobacter capsulatus
10900199 Versatile transcription of biphenyl catabolic bph operon in Pseudomonas pseudoalcaligenes KF707. ORF0 Pseudomonas aeruginosa
10899841 Genetic characterization of a Streptococcus mutans LraI family operon and role in virulence. SloR Streptococcus mutans
10894751 Autoregulation of the Pseudomonas aeruginosa protein PtxS occurs through a specific operator site within the ptxS upstream region. PtxS Pseudomonas aeruginosa
10894740 Vibrio cholerae H-NS silences virulence gene expression at multiple steps in the ToxR regulatory cascade. H-NS Vibrio Cholera
10893220 Steric hindrance regulation of the Pseudomonas aeruginosa amidase operon. AmiR Pseudomonas aeruginosa
10880436 Identification and cell cycle control of a novel pilus system in Caulobacter crescentus. CtrA Caulobacter crescentus
10873648 Characterization of an ECF sigma factor protein from Pseudomonas aeruginosa. PvdS Pseudomonas aeruginosa
10873449 Probing the Escherichia coli transcriptional activator MarA using alanine-scanning mutagenesis: residues important for DNA binding and activation. MarA Escherichia coli
10864496 Purification and in vitro activities of the Bacillus subtilis TnrA transcription factor. TnrA Bacillus subtilis
10850997 Fur positive regulation of iron superoxide dismutase in Escherichia coli: functional analysis of the sodB promoter. Fur Escherichia coli
10850993 Regulation of the furA and catC operon, encoding a ferric uptake regulator homologue and catalase-peroxidase, respectively, in Streptomyces coelicolor A3(2). FurA Streptomyces coelicolor A3(2)
10833520 Evidence of an unusually long operator for the fur repressor in the aerobactin promoter of Escherichia coli.
10816566 The zinc-responsive regulator Zur and its control of the znu gene cluster encoding the ZnuABC zinc uptake system in Escherichia coli. Zur Escherichia coli str. K-12 substr. MG1655
10792721 Dual regulation of mucoidy in Pseudomonas aeruginosa and sigma factor antagonism. AlgU Pseudomonas aeruginosa
10792718 Identification of an AfsA homologue (BarX) from Streptomyces virginiae as a pleiotropic regulator controlling autoregulator biosynthesis, virginiamycin biosynthesis and virginiamycin M1 resistance. BarA Streptomyces virginiae
10787413 Regulation of high affinity nickel uptake in bacteria. Ni2+-Dependent interaction of NikR with wild-type and mutant operator sites. NikR Escherichia coli
10760155 Identification of additional genes belonging to the LexA regulon in Escherichia coli. LexA Escherichia coli
10760146 Manganese homeostasis in Bacillus subtilis is regulated by MntR, a bifunctional regulator related to the diphtheria toxin repressor family of proteins. MntR Bacillus subtilis
10748066 Interaction of CbbR and RegA* transcription regulators with the Rhodobacter sphaeroides cbbIPromoter-operator region. CbbR Rhodobacter sphaeroides
10746770 Fur-independent regulation of iron metabolism by Irr in Bradyrhizobium japonicum. Fur Bradyrhizobium japonicum
10746769 Molecular characterization of the ferric-uptake regulator, fur, from Staphylococcus aureus. Fur Staphylococcus aureus
10736223 Analysis of expression of prgX, a key negative regulator of the transfer of the Enterococcus faecalis pheromone-inducible plasmid pCF10. PrgX Enterococcus faecalis
10708392 Regulation of production of the antifungal metabolite 2,4-diacetylphloroglucinol in Pseudomonas fluorescens F113: genetic analysis of phlF as a transcriptional repressor. PhlF Pseudomonas fluorescens F113
10708389 Transcriptional analysis of the nirS gene, encoding cytochrome cd1 nitrite reductase, of Paracoccus pantotrophus LMD 92.63. Nnr Paracoccus pantotrophus
10702265 The RcsAB box. Characterization of a new operator essential for the regulation of exopolysaccharide biosynthesis in enteric bacteria. RcsAB Escherichia coli K-12
10698954 Cell cycle regulator phosphorylation stimulates two distinct modes of binding at a chromosome replication origin. CtrA Caulobacter crescentus
10692380 Vibrio cholerae VibF is required for vibriobactin synthesis and is a member of the family of nonribosomal peptide synthetases. Fur Vibrio cholerae
10692357 The RofA binding site in Streptococcus pyogenes is utilized in multiple transcriptional pathways. RofA Streptococcus pyogenes
10692351 Functional analysis of PvdS, an iron starvation sigma factor of Pseudomonas aeruginosa. PvdS Pseudomonas aeruginosa
10692350 Three new NifA-regulated genes in the Bradyrhizobium japonicum symbiotic gene region discovered by competitive DNA-RNA hybridization. NifA Bradyrhizobium japonicum
10692157 CtsR controls class III heat shock gene expression in the human pathogen Listeria monocytogenes. CtsR Listeria monocytogenes
10692156 A positive feedback mechanism controls expression of AlkS, the transcriptional regulator of the Pseudomonas oleovorans alkane degradation pathway. AlkS Pseudomonas putida
10678946 Characterization of in vitro DNA binding sites of the EUO protein of Chlamydia psittaci. EUO Chlamydia psittaci
10671497 Regulation of cytochrome bd expression in the obligate aerobe Azotobacter vinelandii by CydR (Fnr). Sensitivity to oxygen, reactive oxygen species, and nitric oxide. CydR Azotobacter vinelandii
10660070 Structure and regulation of the dnaA promoter region in three Streptomyces species. DnaA Streptomyces
10658665 Genetics and regulation of two distinct haem-uptake systems, phu and has, in Pseudomonas aeruginosa. Fur Pseudomonas aeruginosa
10658664 Critical nucleotides in the interaction of CatR with the pheBA promoter: conservation of the CatR-mediated regulation mechanisms between the pheBA and catBCA operons. CatR Pseudomonas putida
10653699 Structural comparison of the PhoB and OmpR DNA-binding/transactivation domains and the arrangement of PhoB molecules on the phosphate box. PhoB Escherichia coli
10639413 Cloning and characterization of vuuA, a gene encoding the Vibrio vulnificus ferric vulnibactin receptor.
10632889 Molecular cloning and transcriptional regulation of ompT, a ToxR-repressed gene in Vibrio cholerae. ToxR Vibrio Cholera
10629190 Characterization of specific nucleotide substitutions in DtxR-specific operators of Corynebacterium diphtheriae that dramatically affect DtxR binding, operator function, and promoter strength. DtxR Corynebacterium diphtheriae
10618236 Carbon catabolite repression in Lactobacillus pentosus: analysis of the ccpA region. CcpA Lactobacillus pentosus
10613878 The replicator of the nopaline-type Ti plasmid pTiC58 is a member of the repABC family and is influenced by the TraR-dependent quorum-sensing regulatory system. TraR Agrobacterium tumefaciens
10613868 HbaR, a 4-hydroxybenzoate sensor and FNR-CRP superfamily member, regulates anaerobic 4-hydroxybenzoate degradation by Rhodopseudomonas palustris. HbaR Escherichia coli
10613863 The VirR response regulator from Clostridium perfringens binds independently to two imperfect direct repeats located upstream of the pfoA promoter. VirR Clostridium perfringens
10613862 DNA-Binding properties of the Fremyella diplosiphon RpbA repressor. RpbA Fremyella diplosiphon
10601279 SarA, a global regulator of virulence determinants in Staphylococcus aureus, binds to a conserved motif essential for sar-dependent gene regulation. SarA Staphylococcus aureus
10595554 NikR is a ribbon-helix-helix DNA-binding protein. NikR Escherichia coli
10570977 A rhizobial homolog of IHF stimulates transcription of dctA in Rhizobium leguminosarum but not in Sinorhizobium meliloti. IHF Rhizobium leguminosarum
10570200 Global GacA-steered control of cyanide and exoprotease production in Pseudomonas fluorescens involves specific ribosome binding sites. GacA Pseudomonas fluorescens
10570171 Identification of genes controlled by quorum sensing in Pseudomonas aeruginosa. LasR Pseudomonas aeruginosa
10564786 Regulation of the expression of amy TO1 encoding a thermostable alpha-amylase from Streptomyces sp. TO1, in its original host and in Streptomyces lividans TK24. Reg1 Streptomyces lividans TK24
10564507 The autoregulatory HspR repressor protein governs chaperone gene transcription in Helicobacter pylori. HspR Helicobacter pylori
10556727 In vitro transcription analysis of rpoD in Pseudomonas aeruginosa PAO1. sigma factor H Pseudomonas aeruginosa
10542188 The BldD protein from Streptomyces coelicolor is a DNA-binding protein. BldD Streptomyces coelicolor
10540292 A role for the leucine-responsive regulatory protein and integration host factor in the regulation of the Salmonella plasmid virulence (spv ) locus in Salmonella typhimurium. Lrp, IHF Salmonella typhimurium
10540289 The A-factor regulatory cascade leading to streptomycin biosynthesis in Streptomyces griseus : identification of a target gene of the A-factor receptor. ArpA Streptomyces griseus
10517591 RheA, the repressor of hsp18 in Streptomyces albus G. RheA Streptomyces albus G
10517320 The transcriptional activator CorR is involved in biosynthesis of the phytotoxin coronatine and binds to the cmaABT promoter region in a temperature-dependent manner. CorR Pseudomonas
10515920 Regulation of the transposase of Tn4652 by the transposon-encoded protein TnpC. TnpA Pseudomonas putida
10510228 Adaptation of Comamonas testosteroni TA441 to utilization of phenol by spontaneous mutation of the gene for a trans-acting factor. AphS Comamonas testosteroni TA441
10503547 Purification and characterization of MerR, the regulator of the broad-spectrum mercury resistance genes in Streptomyces lividans 1326. MerR Streptomyces lividans 1326
10498703 Transcriptional control of Bacillus subtilis hemN and hemZ. Fnr Bacillus subtilis
10496885 Differential transcription of the tcpPH operon confers biotype-specific control of the Vibrio cholerae ToxR virulence regulon. ToxR Vibrio cholerae
10485921 Characterization of a manganese-dependent regulatory protein, TroR, from Treponema pallidum. TroR Treponema pallidum
10473416 Identification of the Pseudomonas stutzeri OX1 toluene-o-xylene monooxygenase regulatory gene (touR) and of its cognate promoter. TouR Pseudomonas stutzeri OX1
10464217 Amino acid-mediated induction of the basic amino acid-specific outer membrane porin OprD from Pseudomonas aeruginosa. ArgR Pseudomonas aeruginosa
10464192 Analysis of BvgA activation of the pertactin gene promoter in Bordetella pertussis. BvgA Bordetella pertussis
10447890 Identification of DNA binding sites for ComE, a key regulator of natural competence in Streptococcus pneumoniae. ComE Streptococcus pneumoniae
10438759 The Pseudomonas aeruginosa exotoxin A regulatory gene, ptxS: evidence for negative autoregulation. PtxS Pseudomonas aeruginosa
10430886 Signal-dependent DNA binding and functional domains of the quorum-sensing activator TraR as identified by repressor activity. TraR Agrobacterium tumefaciens
10423526 Regulation of the Bacillus subtilis phosphotransacetylase gene. ccpA Bacillus subtilis
10419964 OxyR and SoxRS regulation of fur. OxyR Escherichia coli str. K-12
10417639 Mode of action of AraR, the key regulator of L-arabinose metabolism in Bacillus subtilis. AraR B. subtilis 168
10411747 Characterization of the SarA virulence gene regulator of Staphylococcus aureus. SarA Staphylococcus aureus
10411736 ZntR is an autoregulatory protein and negatively regulates the chromosomal zinc resistance operon znt of Staphylococcus aureus. ZntR Staphylococcus aureus
10400592 Regulated expression of a highly conserved regulatory gene cluster is necessary for controlling photosynthesis gene expression in response to anaerobiosis in Rhodobacter capsulatus. RegA Rhodobacter capsulatus
10400588 Interaction of Bacillus subtilis Fur (ferric uptake repressor) with the dhb operator in vitro and in vivo. Fur Bacillus subtilis
10383964 Regulation of podJ expression during the Caulobacter crescentus cell cycle. CtrA Caulobacter crescentus
10369757 Probing activation of the prokaryotic arginine transcriptional regulator using chimeric proteins. ArgR Bacillus subtilis
10348851 Transcriptional control of the iron-responsive fxbA gene by the mycobacterial regulator IdeR. IdeR Mycobacterium smegmatis
10320580 ClpE, a novel type of HSP100 ATPase, is part of the CtsR heat shock regulon of Bacillus subtilis. CtsR Bacillus subtilis
10320354 Spectroscopic and saturation magnetization properties of the manganese- and cobalt-substituted Fur (ferric uptake regulation) protein from Escherichia coli.
10231483 PcaR-mediated activation and repression of pca genes from Pseudomonas putida are propagated by its binding to both the -35 and the -10 promoter elements. PcaR Pseudomonas putida
10224066 Characterization and cloning of celR, a transcriptional regulator of cellulase genes from Thermomonospora fusca. CelR Thermomonospora fusca
10220379 Autoinducer binding by the quorum-sensing regulator TraR increases affinity for target promoters in vitro and decreases TraR turnover rates in whole cells. TraR Agrobacterium tumefaciens
10217783 In vitro transcriptional studies of the bkd operon of Pseudomonas putida: L-branched-chain amino acids and D-leucine are the inducers. BkdR Pseudomonas putida
10217756 The global nitrogen regulator NtcA regulates transcription of the signal transducer PII (GlnB) and influences its phosphorylation level in response to nitrogen and carbon supplies in the Cyanobacterium synechococcus sp. strain PCC 7942. NtcA synechococcus sp. strain PCC 7942
10217491 Determination of the Paracoccus denitrificans SOS box. LexA Paracoccus denitrificans
10216857 Lrp binds to two regions in the dadAX promoter region of Escherichia coli to repress and activate transcription directly. Lrp Escherichia coli
10206709 Transcriptional regulation of molybdoenzyme synthesis in Escherichia coli in response to molybdenum: ModE-molybdate, a repressor of the modABCD (molybdate transport) operon is a secondary transcriptional activator for the hyc and nar operons. ModE Escherichia coli
10200970 Two operons that encode FNR-like proteins in Lactococcus lactis. Flp Lactococcus lactis
10198009 The ArgR regulatory protein, a helper to the anaerobic regulator ANR during transcriptional activation of the arcD promoter in Pseudomonas aeruginosa. ArgR Pseudomonas aeruginosa
10198005 The CtrA response regulator mediates temporal control of gene expression during the Caulobacter cell cycle. CtrA Caulobacter crescentus
10198003 kdgREcc negatively regulates genes for pectinases, cellulase, protease, HarpinEcc, and a global RNA regulator in Erwinia carotovora subsp. carotovora. KdgREcc Erwinia carotovora subsp. carotovora
10096086 Quorum sensing in Vibrio fischeri: elements of the luxl promoter. LuxR Vibrio fischeri
10095766 Interactions of the Streptomyces lividans initiator protein DnaA with its target. DnaA Streptomyces lividans
10094696 RsaL, a novel repressor of virulence gene expression in Pseudomonas aeruginosa. LasR Pseudomonas aeruginosa
10094627 Transcriptional activation of the glycolytic las operon and catabolite repression of the gal operon in Lactococcus lactis are mediated by the catabolite control protein CcpA. CcpA Lactococcus lactis
10074092 Role of ArgR in activation of the ast operon, encoding enzymes of the arginine succinyltransferase pathway in Salmonella typhimurium. ArgR Salmonella typhimurium
10071223 A mutational study of the ArcA-P binding sequences in the aldA promoter of Escherichia coli. ArcA E. coli
None Regulation of D-galacturonate metabolism in Caulobacter crescentus by HumR, a LacI-family transcriptional repressor HumR Caulobacter crescentus