Curation Information

Publication
Molecular characterization of transcriptional regulation of rovA by PhoP and RovA in Yersinia pestis.;Zhang Y, Gao H, Wang L, Xiao X, Tan Y, Guo Z, Zhou D, Yang R;PloS one 2011; 6(9):e25484 [21966533]
TF
PhoP [I3NI96, view regulon]
Reported TF sp.
Yersinia pestis biovar Microtus strain 201
Reported site sp.
Yersinia pestis biovar Microtus strain 201
Created by
Erill Lab
Curation notes
-

Experimental Process

rovA regulation by PhoP assessed by beta-gal with w-t and phoP mutant. Site verified by DNAse footprinting and EMSA.

Transcription Factor Binding Sites


TGTGTTTTTAATGTTAAT
TGTGTTTTTAATGTTAAT

Gene Regulation

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

Site sequence Regulated genes Gene diagram Experimental techniques TF function TF type
TGTGTTTTTAATGTTAAT slyA,
... ... slyA YP_2163 YP_2162 aRA12 slyB
Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Visual sequence inspection (nan) - repressor not specified