LexA - UniProtKB: A0A072Z841 regulon and binding site collection of Corynebacterium glutamicum ATCC 13032


Sites are listed as curated.

TAGAAAAAACGTTCGC
TCGCAATTGTGTGCTA
TAAAACACTTGTTCTA
TCGAATAAATGTTCGA
TCGAAAGTGTGAGCGG
TGGAAAATTTGTTCTA
TGGAACAGGTGTTCGA
TCGATGCTATGTTCGA
TCGAACATAGCATCGA
TTGAAGATATGTACGA
TCGATAATATGTTCTA
TCGAACATGTGAACGG
ACTGACAGAGGTTCGA
TCGAACACTCGTACCA
TCGAACAGTTGTGCGT
TCGAAAACTTTTCCGA
TAGAACACTCCTACGA
TCGAACACGTGAGCGG
TCGAATAACTGTTCGA
TGGAAAATATGTTCGA
ATGAAAATTTGTTTGA
TCGAAAAGTGGCTCCA
CCGATCAAATGTTTGA
TAGAAAACTTGGACGA
ACACAAACGTGTTCGA
TCGTAACCTTGTGCGA
TCGAATAAGTGTCCAC
TCGAAAGTATTTCCGA
TAGAACATATGTACCA
TAGCACATATTTTCTA
TTGAATAAGTGTTTGA
CCGAACACAGTTTTAA
GCGAACAGAGTTTTTA
TCGAACACCGTTTCTC
TTGAACAAATGTTCGG
TCAAATATGTGTTCGA
TTACACATCTGTTCGA
TCGGACACATTTTTGC
TTCGCACATTTTTTCT
TCAAAAAAGTGGTCTA

Sites are listed after the alignment process. For alignment of variable-length binding sites, LASAGNA is used.

TTAGAAAAAACGTTCGC
ATCGCAATTGTGTGCTA
TTAGAACAAGTGTTTTA
ATCGAATAAATGTTCGA
CCCGCTCACACTTTCGA
TTAGAACAAATTTTCCA
TTCGAACACCTGTTCCA
TTCGAACATAGCATCGA
TTCGAACATAGCATCGA
CTCGTACATATCTTCAA
ATAGAACATATTATCGA
GTCGAACATGTGAACGG
TACTGACAGAGGTTCGA
ATGGTACGAGTGTTCGA
CACGCACAACTGTTCGA
ATCGGAAAAGTTTTCGA
TTCGTAGGAGTGTTCTA
CCCGCTCACGTGTTCGA
ATCGAATAACTGTTCGA
CTCGAACATATTTTCCA
CTCAAACAAATTTTCAT
TTCGAAAAGTGGCTCCA
ACCGATCAAATGTTTGA
TTCGTCCAAGTTTTCTA
CACACAAACGTGTTCGA
TTCGCACAAGGTTACGA
TTCGAATAAGTGTCCAC
TTCGAAAGTATTTCCGA
TTAGAACATATGTACCA
ATAGCACATATTTTCTA
TTTGAATAAGTGTTTGA
TCCGAACACAGTTTTAA
AGCGAACAGAGTTTTTA
TTCGAACACCGTTTCTC
ATTGAACAAATGTTCGG
TTCAAATATGTGTTCGA
TTTACACATCTGTTCGA
GGCAAAAATGTGTCCGA
TTCGCACATTTTTTCTA
CTCAAAAAAGTGGTCTA

For the selected transcription factor and species, the list of curated binding sites in the database are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation.

    Genome TF TF conformation Site sequence Site location Experimental techniques Gene regulation Curations PMIDs
    NC_006958.1 A0A072Z841 dimer TAGAAAAAACGTTCGC +[1490520:1490535] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) recN (cg1602) , cg1597 , cg1598 , cg1599 , cg1600 , ppnK (cg1601)
    ... ... recN cg1597 cg1598 cg1599 cg1600 ppnK
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGCAATTGTGTGCTA -[1765375:1765390] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) ruvB (cg1869) , ruvA (cg1870) , ruvC (cg1871) , cg1872 , secN (cg1868)
    ... ... ruvB ruvA ruvC cg1872 secN
    316 19372162
    NC_006958.1 A0A072Z841 dimer TAAAACACTTGTTCTA +[1855357:1855372] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1977 , cg1976
    ... ... cg1977 cg1976
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAATAAATGTTCGA +[1152585:1152600] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1255 , dapD (cg1256) , aroP (cg1257) , dapD2 (cg1259) , fdxC (cg1252) , dapC (cg1253) , cg1254
    ... ... cg1255 dapD aroP dapD2 fdxC dapC cg1254
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAAAGTGTGAGCGG +[984497:984512] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1059 , cg1056 , cg1057
    ... ... cg1059 cg1056 cg1057
    316 19372162
    NC_006958.1 A0A072Z841 dimer TGGAAAATTTGTTCTA +[652889:652904] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) dnaE2 (cg0738) , cg0737 , cg0739 , sirR (cg0741) , cg0740 , cg0742
    ... ... dnaE2 cg0737 cg0739 sirR cg0740 cg0742
    316 19372162
    NC_006958.1 A0A072Z841 dimer TGGAACAGGTGTTCGA +[629228:629243] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg0714 , cg0713 , cg0715 , cg0711 , cg0712
    ... ... cg0714 cg0713 cg0715 cg0711 cg0712
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGATGCTATGTTCGA +[1443887:1443902] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) uvrA (cg1560) , cg1559 , cg1562
    ... ... uvrA cg1559 cg1562
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAACATAGCATCGA -[1443887:1443902] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) uvrA (cg1560) , cg1559 , cg1562
    ... ... uvrA cg1559 cg1562
    316 19372162
    NC_006958.1 A0A072Z841 dimer TTGAAGATATGTACGA +[1225237:1225252] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1319 , cg1318 , cg1317 , cg1316
    ... ... cg1319 cg1318 cg1317 cg1316
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGATAATATGTTCTA +[1187213:1187228] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1288 , cg1289 , cg1287 , metE (cg1290)
    ... ... cg1288 cg1289 cg1287 metE
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAACATGTGAACGG -[2006527:2006542] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg2113 , lexA (cg2114)
    ... ... cg2113 lexA
    316 19372162
    NC_006958.1 A0A072Z841 dimer ACTGACAGAGGTTCGA +[2006661:2006676] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) lexA (cg2114) , cg2113
    ... ... lexA cg2113
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAACACTCGTACCA +[2006607:2006622] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) lexA (cg2114) , cg2113
    ... ... lexA cg2113
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAACAGTTGTGCGT -[2035389:2035404] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) recX (cg2140) , recA (cg2141) , gluD (cg2139) , gluC (cg2138) , cg2145 , cg2146
    ... ... recX recA gluD gluC cg2145 cg2146
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAAAACTTTTCCGA +[2161451:2161466] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg2277 , cg2279 , cg2275 , gdh (cg2280)
    ... ... cg2277 cg2279 cg2275 gdh
    316 19372162
    NC_006958.1 A0A072Z841 dimer TAGAACACTCCTACGA +[2335995:2336010] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg2449 , glnA2 (cg2447)
    ... ... cg2449 glnA2
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAACACGTGAGCGG +[2557830:2557845] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg2683 , cg2680
    ... ... cg2683 cg2680
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAATAACTGTTCGA +[2602888:2602903] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg2733 , gntV (cg2732)
    ... ... cg2733 gntV
    316 19372162
    NC_006958.1 A0A072Z841 dimer TGGAAAATATGTTCGA +[415440:415455] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg0470 , cg0471 , cg0469 , cg0468 , cg0467 , cg0466
    ... ... cg0470 cg0471 cg0469 cg0468 cg0467 cg0466
    316 19372162
    NC_006958.1 A0A072Z841 dimer ATGAAAATTTGTTTGA +[1002765:1002780] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1080 , cg1077
    ... ... cg1080 cg1077
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAAAAGTGGCTCCA -[1776701:1776716] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1884 , cg1883 , cg1881 , cgtRNA_3562 , cgtRNA_3563 , cgtRNA_3564 , cgtRNA_3565 , cgtRNA_3566 , cgtRNA_3567
    ... ... cg1884 cg1883 cg1881 cgtRNA_3562 cgtRNA_3563 cgtRNA_3564 cgtRNA_3565 cgtRNA_3566 cgtRNA_3567
    316 19372162
    NC_006958.1 A0A072Z841 dimer CCGATCAAATGTTTGA -[1929667:1929682] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg2034 , cg2035 , cg2036
    ... ... cg2034 cg2035 cg2036
    316 19372162
    NC_006958.1 A0A072Z841 dimer TAGAAAACTTGGACGA -[2046425:2046440] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) ftsK (cg2158) , cg2159 , cg2160 , dapA (cg2161)
    ... ... ftsK cg2159 cg2160 dapA
    316 19372162
    NC_006958.1 A0A072Z841 dimer ACACAAACGTGTTCGA -[748412:748427] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg0834 , msiK2 (cg0835)
    ... ... cg0834 msiK2
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGTAACCTTGTGCGA -[1221313:1221328] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) putP (cg1314) , cg1313 , cg1316 , cg1317 , cg1318 , cg1319
    ... ... putP cg1313 cg1316 cg1317 cg1318 cg1319
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAATAAGTGTCCAC -[659529:659544] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg0742 , sirR (cg0741) , cg0740 , cg0739 , dnaE2 (cg0738) , cg0745 , cg0747
    ... ... cg0742 sirR cg0740 cg0739 dnaE2 cg0745 cg0747
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAAAGTATTTCCGA -[762340:762355] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg0841 , cg0842 , cg0843 , cg0844 , cg0845
    ... ... cg0841 cg0842 cg0843 cg0844 cg0845
    316 19372162
    NC_006958.1 A0A072Z841 dimer TAGAACATATGTACCA -[805734:805749] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg0875 , cg0874 , aroA (cg0873) , cg0872 , cg0871 , cg0870 , sigH (cg0876) , cg0877
    ... ... cg0875 cg0874 aroA cg0872 cg0871 cg0870 sigH cg0877
    316 19372162
    NC_006958.1 A0A072Z841 dimer TAGCACATATTTTCTA +[1918313:1918328] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg2026 , cg2025
    ... ... cg2026 cg2025
    316 19372162
    NC_006958.1 A0A072Z841 dimer TTGAATAAGTGTTTGA +[984466:984481] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1059 , cg1057 , cg1056
    ... ... cg1059 cg1057 cg1056
    316 19372162
    NC_006958.1 A0A072Z841 dimer CCGAACACAGTTTTAA +[1855286:1855301] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1977 , cg1976 , cg1975
    ... ... cg1977 cg1976 cg1975
    316 19372162
    NC_006958.1 A0A072Z841 dimer GCGAACAGAGTTTTTA +[2006741:2006756] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) lexA (cg2114) , cg2113
    ... ... lexA cg2113
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGAACACCGTTTCTC +[2806050:2806065] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) radA (cg2950) , cg2949 , cg2951 , cg2952
    ... ... radA cg2949 cg2951 cg2952
    316 19372162
    NC_006958.1 A0A072Z841 dimer TTGAACAAATGTTCGG +[1332507:1332522] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1427 , cg1426 , lysG (cg1425)
    ... ... cg1427 cg1426 lysG
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCAAATATGTGTTCGA -[2269432:2269447] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg2381 , cg2382 , metF (cg2383)
    ... ... cg2381 cg2382 metF
    316 19372162
    NC_006958.1 A0A072Z841 dimer TTACACATCTGTTCGA +[3191990:3192005] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg3345 , cg3344
    ... ... cg3345 cg3344
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCGGACACATTTTTGC -[1316324:1316339] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1408 , pfkA (cg1409)
    ... ... cg1408 pfkA
    316 19372162
    NC_006958.1 A0A072Z841 dimer TTCGCACATTTTTTCT -[1776822:1776837] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg1884 , cg1883 , cg1881 , cgtRNA_3562 , cgtRNA_3563 , cgtRNA_3564 , cgtRNA_3565 , cgtRNA_3566 , cgtRNA_3567
    ... ... cg1884 cg1883 cg1881 cgtRNA_3562 cgtRNA_3563 cgtRNA_3564 cgtRNA_3565 cgtRNA_3566 cgtRNA_3567
    316 19372162
    NC_006958.1 A0A072Z841 dimer TCAAAAAAGTGGTCTA +[832471:832486] Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) cg0898 , cg0899 , pdxR (cg0897)
    ... ... cg0898 cg0899 pdxR
    316 19372162

    All binding sites in split view are combined and a sequence logo is generated. Note that it may contain binding site sequences from different transcription factors and different species. To see individiual sequence logos and curation details go to split view.


    Sites are listed as curated.

    TAGAAAAAACGTTCGC
    TCGCAATTGTGTGCTA
    TAAAACACTTGTTCTA
    TCGAATAAATGTTCGA
    TCGAAAGTGTGAGCGG
    TGGAAAATTTGTTCTA
    TGGAACAGGTGTTCGA
    TCGATGCTATGTTCGA
    TCGAACATAGCATCGA
    TTGAAGATATGTACGA
    TCGATAATATGTTCTA
    TCGAACATGTGAACGG
    ACTGACAGAGGTTCGA
    TCGAACACTCGTACCA
    TCGAACAGTTGTGCGT
    TCGAAAACTTTTCCGA
    TAGAACACTCCTACGA
    TCGAACACGTGAGCGG
    TCGAATAACTGTTCGA
    TGGAAAATATGTTCGA
    ATGAAAATTTGTTTGA
    TCGAAAAGTGGCTCCA
    CCGATCAAATGTTTGA
    TAGAAAACTTGGACGA
    ACACAAACGTGTTCGA
    TCGTAACCTTGTGCGA
    TCGAATAAGTGTCCAC
    TCGAAAGTATTTCCGA
    TAGAACATATGTACCA
    TAGCACATATTTTCTA
    TTGAATAAGTGTTTGA
    CCGAACACAGTTTTAA
    GCGAACAGAGTTTTTA
    TCGAACACCGTTTCTC
    TTGAACAAATGTTCGG
    TCAAATATGTGTTCGA
    TTACACATCTGTTCGA
    TCGGACACATTTTTGC
    TTCGCACATTTTTTCT
    TCAAAAAAGTGGTCTA

    Sites are listed after the alignment process. For alignment of variable-length binding sites, LASAGNA is used.

    TTAGAAAAAACGTTCGC
    ATCGCAATTGTGTGCTA
    TTAGAACAAGTGTTTTA
    ATCGAATAAATGTTCGA
    CCCGCTCACACTTTCGA
    TTAGAACAAATTTTCCA
    TTCGAACACCTGTTCCA
    TTCGAACATAGCATCGA
    TTCGAACATAGCATCGA
    CTCGTACATATCTTCAA
    ATAGAACATATTATCGA
    GTCGAACATGTGAACGG
    TACTGACAGAGGTTCGA
    ATGGTACGAGTGTTCGA
    CACGCACAACTGTTCGA
    ATCGGAAAAGTTTTCGA
    TTCGTAGGAGTGTTCTA
    CCCGCTCACGTGTTCGA
    ATCGAATAACTGTTCGA
    CTCGAACATATTTTCCA
    CTCAAACAAATTTTCAT
    TTCGAAAAGTGGCTCCA
    ACCGATCAAATGTTTGA
    TTCGTCCAAGTTTTCTA
    CACACAAACGTGTTCGA
    TTCGCACAAGGTTACGA
    TTCGAATAAGTGTCCAC
    TTCGAAAGTATTTCCGA
    TTAGAACATATGTACCA
    ATAGCACATATTTTCTA
    TTTGAATAAGTGTTTGA
    TCCGAACACAGTTTTAA
    AGCGAACAGAGTTTTTA
    TTCGAACACCGTTTCTC
    ATTGAACAAATGTTCGG
    TTCAAATATGTGTTCGA
    TTTACACATCTGTTCGA
    GGCAAAAATGTGTCCGA
    TTCGCACATTTTTTCTA
    CTCAAAAAAGTGGTCTA
    Download data in FASTA format.
    Download data in TSV (tab-separated-value) format. For each binding site, all sources of evidence (i.e. experimental techniques and publication information) are combined into one record.
    Download raw data in TSV format. All reported sites are exported individually.
    Download data in Attribute-Relation File Format (ARFF).
    Download Position-Specific-Frequency-Matrix of the motif in TRANSFAC format.
    Download Position-Specific-Frequency-Matrix of the motif in JASPAR format.
    Download Position-Specific-Frequency-Matrix of the motif in raw FASTA format. The matrix consists of four columns in the order A C G T.