Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00000cf0
Genome
Yersinia pestis - NC_004088.1
TF
PhoP [UniProtKB:A0A0B6P4W3, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GCGTTTAGTTTTCGTTAAC + [2110194, 2110212] 20661307 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 14

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... y1917 y1918 y1919 y1920 arnT y1922 y1923 btuD btuE
Gene Locus tag Description
y1917 y1917 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
y1918 y1918 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase
y1919 y1919 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
y1920 y1920 hypothetical protein
arnT y1921 4-amino-4-deoxy-L-arabinose transferase
y1922 y1922 hypothetical protein
y1923 y1923 hypothetical protein
btuD y1916 vitamin B12-transporter ATPase
btuE y1915 glutathione peroxidase