Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00000d20
Genome
Yersinia pestis - NC_004088.1
TF
PhoP [UniProtKB:A0A0B6P4W3, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATATTTACCTGCCGTTTAC - [2874014, 2874032] 20661307 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 14

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... y2608 sbcB
Gene Locus tag Description
y2608 y2608 hypothetical protein
sbcB y2610 3'->5' specific; deoxyribophosphodiesterase