Transcription Factor Binding Site Information

Yersinia pestis - NC_005810.1
PhoP [UniProtKB:I3NI96, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGTGTTTTTAATGTTAAT - [2403677, 2403694] 21966533 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Visual sequence inspection (nan) - 383

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... slyA YP_2163 YP_2162 aRA12 slyB
Gene Locus tag Description
slyA YP_2160 transcriptional regulator SlyA
YP_2163 YP_2163 cell division protein
YP_2162 YP_2162 Fe-S protein
aRA12 YP_2161 aldo/keto reductase
slyB YP_2159 lipoprotein