Site information for: HipB in species Escherichia coli; genome accession: NC

Transcription Factor Binding Site Information

dbxref: CollecTF:EXPSITE_0002cd00
Genome: Escherichia coli - NC_000913.2
TF: HipB [UniProtKB:P23873, view regulon], [UniProtKB:P23874, view regulon]

Supporting Evidence

Binding site	Location	Publication	Experimental techniques used	Curation
TATCCGCTTAAGGGGATA	+ [1590488, 1590505]	19150849	Experimental technique details X-ray crystallography (ECO:0005670) X-ray crystallography - ECO:0005670 X-ray crystallography is a method to determine the molecular structure of a crystal that is typically used to probe at the tridimensional structure of proteins. In some cases, it is possible to co-crystallize the protein bound to its DNA binding site, providing detail on the particular arrangement of the two components. Doing so provides, obviously, unequivocal evidence of binding. -	1047

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

Gene	Locus tag	Description
hipA	b1507	serine protein kinase required for perister formation; toxin of HipAB toxin-antitoxin system
hipB	b1508	antitoxin of HipAB toxin-antitoxin system